Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_04605

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,063,636	-				-0.1
1,063,636	-				-0.7
1,063,678	-				-0.4
1,063,679	+				-0.4
1,063,679	+				-0.6
1,063,683	+				-0.6
1,063,731	+				-0.8
1,063,731	+				+0.3
1,063,732	-				-0.2
1,063,764	+				-0.3
1,063,793	+				-0.1
1,063,794	-				-0.1
1,063,794	-				-0.2
1,063,794	-				-0.6
1,063,794	-				-0.6
1,063,817	-		CA264_04600	0.11	-0.8
1,063,843	+		CA264_04600	0.14	+1.0
1,063,844	-		CA264_04600	0.14	-0.1
1,063,844	-		CA264_04600	0.14	-0.4
1,063,844	-		CA264_04600	0.14	-2.9
1,063,847	-		CA264_04600	0.15	-0.4
1,063,858	+		CA264_04600	0.16	-0.1
1,063,859	-		CA264_04600	0.16	+1.5
1,063,902	-		CA264_04600	0.21	+0.5
1,063,918	+		CA264_04600	0.23	+0.4
1,063,918	+		CA264_04600	0.23	-0.1
1,063,918	+		CA264_04600	0.23	-0.3
1,063,918	+		CA264_04600	0.23	+0.3
1,063,919	-		CA264_04600	0.23	-0.6
1,063,920	+		CA264_04600	0.23	+0.7
1,063,920	+		CA264_04600	0.23	+0.4
1,063,920	+		CA264_04600	0.23	+0.4
1,063,920	+		CA264_04600	0.23	-1.0
1,063,921	-		CA264_04600	0.23	+0.5
1,063,921	-		CA264_04600	0.23	-1.0
1,063,921	-		CA264_04600	0.23	-1.1
1,063,923	+		CA264_04600	0.23	+0.4
1,063,923	+		CA264_04600	0.23	+0.7
1,063,924	-		CA264_04600	0.24	-0.4
1,063,931	+		CA264_04600	0.24	-0.6
1,063,956	-		CA264_04600	0.27	-0.7
1,063,963	-		CA264_04600	0.28	+0.4
1,064,000	-		CA264_04600	0.32	-0.8
1,064,000	-		CA264_04600	0.32	+0.3
1,064,038	-		CA264_04600	0.37	-0.2
1,064,057	+		CA264_04600	0.39	-0.1
1,064,057	+		CA264_04600	0.39	-0.3
1,064,065	-		CA264_04600	0.40	+0.9
1,064,079	+		CA264_04600	0.42	-0.7
1,064,079	+		CA264_04600	0.42	-0.2
1,064,111	+		CA264_04600	0.45	-1.4
1,064,159	+		CA264_04600	0.51	-1.3
1,064,160	-		CA264_04600	0.51	-0.3
1,064,160	-		CA264_04600	0.51	-0.9
1,064,174	+		CA264_04600	0.53	-0.3
1,064,174	+		CA264_04600	0.53	-0.2
1,064,175	-		CA264_04600	0.53	+1.1
1,064,175	-		CA264_04600	0.53	+0.6
1,064,177	-		CA264_04600	0.53	-0.3
1,064,216	-		CA264_04600	0.57	+0.0
1,064,218	-		CA264_04600	0.58	-0.9
1,064,218	-		CA264_04600	0.58	+1.2
1,064,218	-		CA264_04600	0.58	+0.0
1,064,218	-		CA264_04600	0.58	+0.1
1,064,233	+		CA264_04600	0.59	-0.4
1,064,233	+		CA264_04600	0.59	-1.6
1,064,233	+		CA264_04600	0.59	-0.3
1,064,233	+		CA264_04600	0.59	-2.3
1,064,234	-		CA264_04600	0.60	+0.1
1,064,238	-		CA264_04600	0.60	-0.9
1,064,264	+		CA264_04600	0.63	-0.5
1,064,264	+		CA264_04600	0.63	-0.3
1,064,265	-		CA264_04600	0.63	+0.2
1,064,265	-		CA264_04600	0.63	-0.4
1,064,278	+		CA264_04600	0.65	-1.9
1,064,278	+		CA264_04600	0.65	+0.2
1,064,278	+		CA264_04600	0.65	-0.2
1,064,278	+		CA264_04600	0.65	-0.1
1,064,278	+		CA264_04600	0.65	-1.2
1,064,278	+		CA264_04600	0.65	-0.4
1,064,279	-		CA264_04600	0.65	+0.0
1,064,279	-		CA264_04600	0.65	-0.2
1,064,283	-		CA264_04600	0.65	-0.2
1,064,283	-		CA264_04600	0.65	+0.1
1,064,320	+		CA264_04600	0.70	-0.4
1,064,320	+		CA264_04600	0.70	+0.2
1,064,320	+		CA264_04600	0.70	+0.1
1,064,321	-		CA264_04600	0.70	-0.4
1,064,410	-		CA264_04600	0.80	-0.1
1,064,441	-		CA264_04600	0.84	-1.2
1,064,484	+		CA264_04600	0.89	-0.4
1,064,484	+		CA264_04600	0.89	-0.7
1,064,485	-		CA264_04600	0.89	-0.1
1,064,485	-		CA264_04600	0.89	-0.0
1,064,485	-		CA264_04600	0.89	-0.4
1,064,485	-		CA264_04600	0.89	+0.5
1,064,485	-		CA264_04600	0.89	-1.1
1,064,487	-		CA264_04600	0.89	+0.2
1,064,487	-		CA264_04600	0.89	-0.7
1,064,487	-		CA264_04600	0.89	-0.9
1,064,495	+		CA264_04600	0.90	-0.1
1,064,504	-				-1.0
1,064,506	-				-0.3
1,064,508	+				+0.5
1,064,509	-				-0.6
1,064,509	-				-0.8
1,064,516	+				-0.6
1,064,516	+				-0.5
1,064,516	+				-0.6
1,064,522	-				-0.8
1,064,548	-				-0.3
1,064,548	-				-0.5
1,064,570	-				+0.4
1,064,570	-				-0.3
1,064,586	+				-0.4
1,064,595	-				-1.8
1,064,595	-				-0.3
1,064,634	+				+1.8
1,064,662	+				+0.1
1,064,663	-				+0.9
1,064,666	+				-0.3
1,064,696	-				+0.9
1,064,699	+				-2.3
1,064,727	-				-0.1
1,064,729	-				-2.1
1,064,744	-				-1.8
1,064,778	+		CA264_04605	0.11	-0.5
1,064,778	+		CA264_04605	0.11	-1.3
1,064,778	+		CA264_04605	0.11	-1.5
1,064,783	+		CA264_04605	0.11	-3.6
1,064,825	+		CA264_04605	0.14	+0.4
1,064,828	+		CA264_04605	0.15	-2.8
1,064,829	-		CA264_04605	0.15	-0.6
1,064,831	+		CA264_04605	0.15	-1.4
1,064,831	+		CA264_04605	0.15	+0.6
1,064,831	+		CA264_04605	0.15	-2.5
1,064,837	-		CA264_04605	0.15	-0.9
1,064,839	-		CA264_04605	0.16	-1.1
1,064,840	+		CA264_04605	0.16	-1.2
1,064,849	-		CA264_04605	0.16	-1.3
1,064,856	+		CA264_04605	0.17	-2.0
1,064,857	-		CA264_04605	0.17	-1.9
1,064,924	+		CA264_04605	0.22	-0.0
1,064,931	-		CA264_04605	0.22	-2.1
1,064,945	+		CA264_04605	0.24	-3.4
1,064,974	+		CA264_04605	0.26	-1.0
1,065,000	-		CA264_04605	0.28	+0.1
1,065,011	+		CA264_04605	0.29	-0.9
1,065,088	+		CA264_04605	0.34	-2.3
1,065,088	+		CA264_04605	0.34	-1.5
1,065,088	+		CA264_04605	0.34	+0.4
1,065,149	+		CA264_04605	0.39	-2.7
1,065,163	+		CA264_04605	0.40	-2.8
1,065,168	+		CA264_04605	0.40	+0.5
1,065,168	+		CA264_04605	0.40	-0.5
1,065,169	-		CA264_04605	0.40	-1.1
1,065,169	-		CA264_04605	0.40	-0.8
1,065,176	+		CA264_04605	0.41	-1.8
1,065,226	+		CA264_04605	0.45	-0.9
1,065,226	+		CA264_04605	0.45	-1.1
1,065,226	+		CA264_04605	0.45	-1.3
1,065,344	+		CA264_04605	0.54	-1.6
1,065,350	+		CA264_04605	0.54	-1.7
1,065,351	-		CA264_04605	0.54	-1.4
1,065,351	-		CA264_04605	0.54	-3.4
1,065,369	-		CA264_04605	0.56	-1.8
1,065,375	-		CA264_04605	0.56	-2.3
1,065,383	+		CA264_04605	0.57	-1.5
1,065,394	+		CA264_04605	0.57	+0.6
1,065,396	+		CA264_04605	0.58	-0.8
1,065,402	+		CA264_04605	0.58	-3.2
1,065,445	-		CA264_04605	0.61	-2.7
1,065,446	+		CA264_04605	0.61	-1.7
1,065,466	+		CA264_04605	0.63	-1.1
1,065,478	+		CA264_04605	0.64	-0.3
1,065,478	+		CA264_04605	0.64	-1.2
1,065,478	+		CA264_04605	0.64	-1.0
1,065,480	+		CA264_04605	0.64	-1.5
1,065,515	-		CA264_04605	0.67	-1.8
1,065,590	+		CA264_04605	0.72	-2.8
1,065,633	-		CA264_04605	0.75	-0.8
1,065,646	+		CA264_04605	0.76	-1.6
1,065,683	+		CA264_04605	0.79	-0.9
1,065,735	+		CA264_04605	0.83	-1.0
1,065,757	-		CA264_04605	0.85	-2.7
1,065,764	-		CA264_04605	0.85	-1.5
1,065,807	-		CA264_04605	0.89	-0.6
1,065,808	+		CA264_04605	0.89	-0.8
1,065,809	-		CA264_04605	0.89	-0.9
1,065,818	+		CA264_04605	0.89	-1.2
1,065,818	+		CA264_04605	0.89	-1.8
1,065,818	+		CA264_04605	0.89	-1.9
1,065,818	+		CA264_04605	0.89	-2.0
1,065,819	-		CA264_04605	0.89	-3.5
1,065,833	-				-1.8
1,065,839	-				-1.9
1,065,932	-				-1.7
1,065,932	-				-2.1
1,065,935	-				-1.2
1,065,938	+				+0.0
1,065,938	+				-0.0
1,065,939	-				-2.4
1,065,961	-				-0.3
1,065,964	-				+0.3
1,065,980	+				-0.8
1,065,980	+				-0.5
1,066,023	-				+0.1
1,066,158	-				-0.8
1,066,160	-				-0.6
1,066,160	-				+0.7
1,066,161	+				-0.5
1,066,162	-				-0.3
1,066,181	+				-0.6
1,066,181	+				+1.9
1,066,181	+				-0.1
1,066,215	+				+0.1
1,066,216	-				-0.4
1,066,239	-				-1.2
1,066,262	-				-0.3
1,066,262	-				+0.4
1,066,266	-				-1.5
1,066,365	+				-0.0
1,066,369	+				+1.8
1,066,369	+				-0.3
1,066,419	+				+0.3
1,066,419	+				+0.9
1,066,420	-				-0.3
1,066,420	-				+0.5
1,066,516	-				+0.3
1,066,520	-				+0.3
1,066,520	-				-0.4
1,066,522	-				-0.4
1,066,530	-				+1.2
1,066,538	+				+0.9
1,066,538	+				-0.0
1,066,538	+				+0.4
1,066,549	+				+0.1
1,066,581	+				+1.4
1,066,597	+				-0.1
1,066,597	+				+0.0
1,066,604	+				+0.7
1,066,604	+				+1.1
1,066,604	+				+1.1
1,066,658	-		CA264_04610	0.12	+0.3
1,066,682	+		CA264_04610	0.15	+0.6
1,066,683	-		CA264_04610	0.15	+0.7
1,066,683	-		CA264_04610	0.15	+0.1
1,066,712	-		CA264_04610	0.18	+0.2
1,066,761	+		CA264_04610	0.23	-0.6
1,066,761	+		CA264_04610	0.23	-1.0
1,066,761	+		CA264_04610	0.23	+0.4
1,066,764	+		CA264_04610	0.24	-0.6
1,066,764	+		CA264_04610	0.24	+0.0
1,066,764	+		CA264_04610	0.24	-0.2
1,066,840	+		CA264_04610	0.32	-0.3
1,066,859	+		CA264_04610	0.34	-0.8
1,066,887	-		CA264_04610	0.37	+0.0
1,066,887	-		CA264_04610	0.37	-0.1
1,066,913	+		CA264_04610	0.40	+0.6
1,066,922	-		CA264_04610	0.41	-0.3
1,066,936	+		CA264_04610	0.43	+0.1
1,066,937	-		CA264_04610	0.43	-0.2