Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS08580 and ABID97_RS08585 are separated by 13 nucleotides ABID97_RS08585 and ABID97_RS08590 are separated by 58 nucleotides ABID97_RS08590 and ABID97_RS08595 are separated by 16 nucleotides
ABID97_RS08580: ABID97_RS08580 - FAD-dependent monooxygenase, at 1,802,573 to 1,803,757
_RS08580
ABID97_RS08585: ABID97_RS08585 - SMI1/KNR4 family protein, at 1,803,771 to 1,805,021
_RS08585
ABID97_RS08590: ABID97_RS08590 - tryptophan 2,3-dioxygenase, at 1,805,080 to 1,805,916
_RS08590
ABID97_RS08595: ABID97_RS08595 - hypothetical protein, at 1,805,933 to 1,806,418
_RS08595
Position (kb)
1803
1804
1805
1806 Strain fitness (log2 ratio)
-1
0
1 at 1803.829 kb on + strand at 1803.829 kb on + strand at 1804.340 kb on - strand, within ABID97_RS08585 at 1804.340 kb on - strand, within ABID97_RS08585 at 1804.340 kb on - strand, within ABID97_RS08585 at 1804.405 kb on + strand, within ABID97_RS08585 at 1804.406 kb on - strand, within ABID97_RS08585 at 1804.432 kb on + strand, within ABID97_RS08585 at 1804.433 kb on - strand, within ABID97_RS08585 at 1804.609 kb on + strand, within ABID97_RS08585 at 1805.047 kb on + strand at 1805.144 kb on + strand at 1805.145 kb on - strand at 1805.145 kb on - strand at 1805.145 kb on - strand at 1805.343 kb on - strand, within ABID97_RS08590 at 1805.423 kb on + strand, within ABID97_RS08590 at 1805.592 kb on - strand, within ABID97_RS08590 at 1805.853 kb on - strand at 1805.955 kb on + strand at 1805.955 kb on + strand at 1805.955 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 1,803,829 + -0.0 1,803,829 + +0.5 1,804,340 - ABID97_RS08585 0.45 -1.0 1,804,340 - ABID97_RS08585 0.45 -0.7 1,804,340 - ABID97_RS08585 0.45 -0.1 1,804,405 + ABID97_RS08585 0.51 -0.2 1,804,406 - ABID97_RS08585 0.51 -0.1 1,804,432 + ABID97_RS08585 0.53 -0.5 1,804,433 - ABID97_RS08585 0.53 -0.0 1,804,609 + ABID97_RS08585 0.67 +0.0 1,805,047 + -0.2 1,805,144 + -0.3 1,805,145 - -0.7 1,805,145 - +0.4 1,805,145 - -0.3 1,805,343 - ABID97_RS08590 0.31 +0.6 1,805,423 + ABID97_RS08590 0.41 +0.3 1,805,592 - ABID97_RS08590 0.61 -0.4 1,805,853 - +0.7 1,805,955 + -0.3 1,805,955 + +0.2 1,805,955 + +0.1
Or see this region's nucleotide sequence