Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_RNA27

Experiment: KB with Tetracycline 0.0015 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Tetracycline 0.0015 ug/ml
1,787,557	-		Psyr_1588	0.47	-0.2
1,787,557	-		Psyr_1588	0.47	+0.1
1,787,746	+		Psyr_1588	0.68	-1.7
1,787,746	+		Psyr_1588	0.68	+1.0
1,787,874	+		Psyr_1588	0.81	-0.4
1,787,875	-		Psyr_1588	0.82	-0.9
1,787,920	+		Psyr_1588	0.86	-1.9
1,787,921	-		Psyr_1588	0.87	-1.5
1,788,063	+				-0.2
1,788,063	+				+0.1
1,788,063	+				-0.9
1,788,064	-				-0.7
1,788,064	-				-0.7
1,788,064	-				-1.1
1,788,066	-				+0.1
1,788,066	-				+0.8
1,788,081	-				+0.6
1,788,143	-				+0.1
1,788,511	-				-0.9
1,788,545	+				+0.6
1,788,546	-				+1.5
1,788,550	-				-3.1
1,788,612	+				-0.7
1,788,627	+				-1.7
1,788,630	+				+0.6
1,788,686	+				+1.1
1,788,725	+				+1.0
1,788,750	-				+0.1
1,788,776	-				-0.9
1,788,823	+		Psyr_1589	0.18	-0.4
1,788,858	-		Psyr_1589	0.27	-0.9
1,788,897	+		Psyr_1589	0.37	+0.1
1,788,897	+		Psyr_1589	0.37	-0.4
1,788,898	-		Psyr_1589	0.37	-0.5
1,788,927	+		Psyr_1589	0.45	+0.1
1,788,927	+		Psyr_1589	0.45	+3.0
1,788,929	+		Psyr_1589	0.45	+0.6
1,788,929	+		Psyr_1589	0.45	-0.4
1,788,930	-		Psyr_1589	0.45	+1.2
1,789,069	+		Psyr_1589	0.81	+0.3
1,789,070	-		Psyr_1589	0.81	-0.9
1,789,080	-		Psyr_1589	0.83	-2.1
1,789,080	-		Psyr_1589	0.83	+0.4
1,789,080	-		Psyr_1589	0.83	+1.6
1,789,139	+				+0.6