Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3261

Experiment: KB with Tetracycline 0.0015 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Tetracycline 0.0015 ug/ml
3,903,866	+		Psyr_3260	0.53	-0.5
3,903,924	+		Psyr_3260	0.57	-0.8
3,904,230	-		Psyr_3260	0.78	+0.9
3,904,230	-		Psyr_3260	0.78	+0.8
3,904,246	-		Psyr_3260	0.79	-0.5
3,904,246	-		Psyr_3260	0.79	+0.5
3,904,246	-		Psyr_3260	0.79	-0.3
3,904,249	+		Psyr_3260	0.79	-0.5
3,904,249	+		Psyr_3260	0.79	+0.9
3,904,249	+		Psyr_3260	0.79	-0.9
3,904,249	+		Psyr_3260	0.79	+2.5
3,904,249	+		Psyr_3260	0.79	+0.5
3,904,250	-		Psyr_3260	0.79	+0.5
3,904,250	-		Psyr_3260	0.79	+0.3
3,904,250	-		Psyr_3260	0.79	+0.1
3,904,250	-		Psyr_3260	0.79	+0.3
3,904,261	+		Psyr_3260	0.80	-2.0
3,904,313	+		Psyr_3260	0.83	+0.2
3,904,332	-		Psyr_3260	0.84	-0.8
3,904,351	+		Psyr_3260	0.86	+0.6
3,904,352	-		Psyr_3260	0.86	-0.2
3,904,352	-		Psyr_3260	0.86	+0.9
3,904,355	+		Psyr_3260	0.86	-0.8
3,904,356	-		Psyr_3260	0.86	+0.8
3,904,356	-		Psyr_3260	0.86	+0.2
3,904,449	-				-0.1
3,904,460	+				-0.3
3,904,461	-				-1.3
3,904,693	+				-0.0
3,904,793	+				+0.2
3,904,839	+				+0.5
3,904,951	+				-1.7
3,905,098	+		Psyr_3261	0.16	+0.5
3,905,128	-		Psyr_3261	0.18	-0.7
3,905,152	-		Psyr_3261	0.19	+0.2
3,905,175	+		Psyr_3261	0.21	-0.6
3,905,176	-		Psyr_3261	0.21	+1.5
3,905,207	+		Psyr_3261	0.23	+0.1
3,905,225	+		Psyr_3261	0.24	+1.1
3,905,242	+		Psyr_3261	0.25	+0.6
3,905,243	-		Psyr_3261	0.25	-2.1
3,905,243	-		Psyr_3261	0.25	-1.2
3,905,246	+		Psyr_3261	0.25	-0.7
3,905,247	-		Psyr_3261	0.25	+0.2
3,905,341	+		Psyr_3261	0.31	-0.2
3,905,341	+		Psyr_3261	0.31	+0.6
3,905,341	+		Psyr_3261	0.31	+0.1
3,905,356	+		Psyr_3261	0.32	+0.5
3,905,477	+		Psyr_3261	0.39	-0.8
3,905,477	+		Psyr_3261	0.39	+0.5
3,905,477	+		Psyr_3261	0.39	-0.5
3,905,478	-		Psyr_3261	0.39	-0.4
3,905,478	-		Psyr_3261	0.39	-0.9
3,906,307	+				+2.1
3,906,307	+				+0.5
3,906,307	+				+0.3
3,906,307	+				+0.8
3,906,308	-				+0.8
3,906,308	-				+0.5
3,906,308	-				+0.5
3,906,308	-				+1.5
3,906,308	-				-1.8
3,906,435	+				-0.5
3,906,435	+				+0.4
3,906,435	+				-0.2
3,906,435	+				+0.6
3,906,436	-				+0.9
3,906,487	-				-1.1
3,906,701	-		Psyr_3262	0.15	+0.5
3,907,006	+				-1.1
3,907,007	-				+1.1
3,907,049	-				-0.8
3,907,057	-				-1.8
3,907,097	-				+1.0
3,907,435	-				-1.0