Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3223

Experiment: KB with Tetracycline 0.0015 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Tetracycline 0.0015 ug/ml
3,860,558	+		Psyr_3222	0.65	+1.5
3,860,559	-		Psyr_3222	0.65	-1.3
3,860,633	+		Psyr_3222	0.70	-0.8
3,860,678	+		Psyr_3222	0.72	-0.5
3,860,678	+		Psyr_3222	0.72	+0.1
3,860,679	-		Psyr_3222	0.73	+0.5
3,860,687	+		Psyr_3222	0.73	-1.7
3,860,687	+		Psyr_3222	0.73	-1.5
3,860,688	-		Psyr_3222	0.73	+0.5
3,860,688	-		Psyr_3222	0.73	+0.2
3,860,693	+		Psyr_3222	0.73	+2.9
3,860,694	-		Psyr_3222	0.74	-0.1
3,860,720	+		Psyr_3222	0.75	+0.6
3,860,721	-		Psyr_3222	0.75	-0.3
3,860,721	-		Psyr_3222	0.75	-0.1
3,860,775	-		Psyr_3222	0.79	+0.6
3,861,065	+				-1.3
3,861,066	-				+0.6
3,861,066	-				+1.1
3,861,088	+				+0.6
3,861,111	+				-0.5
3,861,159	+				-1.1
3,861,159	+				-0.1
3,861,159	+				+0.3
3,861,160	-				-0.3
3,861,160	-				+1.3
3,861,171	-				+0.5
3,861,333	-		Psyr_3223	0.25	-0.2
3,861,351	-		Psyr_3223	0.27	-0.2
3,861,405	-		Psyr_3223	0.33	-0.2
3,861,431	+		Psyr_3223	0.36	+0.8
3,861,492	-		Psyr_3223	0.42	-0.3
3,861,492	-		Psyr_3223	0.42	+1.5
3,861,492	-		Psyr_3223	0.42	+0.5
3,861,503	+		Psyr_3223	0.43	-0.4
3,861,503	+		Psyr_3223	0.43	+0.1
3,861,504	-		Psyr_3223	0.43	-0.3
3,861,691	+		Psyr_3223	0.63	+1.2
3,861,692	-		Psyr_3223	0.63	-1.1
3,861,692	-		Psyr_3223	0.63	-1.5
3,861,692	-		Psyr_3223	0.63	-0.5
3,861,692	-		Psyr_3223	0.63	-0.6
3,861,692	-		Psyr_3223	0.63	+0.5
3,861,692	-		Psyr_3223	0.63	+0.1
3,861,720	-		Psyr_3223	0.66	-0.3
3,861,852	-		Psyr_3223	0.81	+0.9
3,861,852	-		Psyr_3223	0.81	-1.5
3,861,854	+		Psyr_3223	0.81	-0.8
3,861,854	+		Psyr_3223	0.81	-0.4
3,861,855	-		Psyr_3223	0.81	+0.5
3,861,855	-		Psyr_3223	0.81	-2.4
3,861,855	-		Psyr_3223	0.81	+0.0
3,861,882	-		Psyr_3223	0.84	-0.4
3,861,882	-		Psyr_3223	0.84	+1.5
3,861,887	+		Psyr_3223	0.84	+1.7
3,861,887	+		Psyr_3223	0.84	+0.5
3,862,031	+				+0.9
3,862,032	-				+0.2
3,862,032	-				+1.4
3,862,117	+		Psyr_3224	0.21	-1.2
3,862,117	+		Psyr_3224	0.21	+0.5
3,862,118	-		Psyr_3224	0.21	+1.9
3,862,118	-		Psyr_3224	0.21	+0.5
3,862,118	-		Psyr_3224	0.21	-0.1
3,862,118	-		Psyr_3224	0.21	+1.3
3,862,118	-		Psyr_3224	0.21	-1.3
3,862,118	-		Psyr_3224	0.21	+1.5
3,862,121	+		Psyr_3224	0.22	-0.6
3,862,122	-		Psyr_3224	0.22	-0.1
3,862,122	-		Psyr_3224	0.22	+0.1
3,862,410	+		Psyr_3224	0.85	+0.5
3,862,411	-		Psyr_3224	0.86	+0.9
3,862,639	-				-0.3
3,862,639	-				+0.3
3,862,664	-				-0.5
3,862,664	-				+0.5
3,862,842	+		Psyr_3225	0.17	-0.7
3,862,842	+		Psyr_3225	0.17	+0.2