Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3184

Experiment: KB with Tetracycline 0.0015 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Tetracycline 0.0015 ug/ml
3,812,506	+		Psyr_3183	0.77	-1.0
3,812,613	-		Psyr_3183	0.81	+0.0
3,812,626	+		Psyr_3183	0.82	-0.9
3,812,626	+		Psyr_3183	0.82	-1.3
3,812,627	-		Psyr_3183	0.82	+0.6
3,812,627	-		Psyr_3183	0.82	+1.5
3,812,627	-		Psyr_3183	0.82	+0.8
3,812,627	-		Psyr_3183	0.82	+1.2
3,812,627	-		Psyr_3183	0.82	-1.5
3,812,663	+		Psyr_3183	0.84	+0.5
3,812,664	-		Psyr_3183	0.84	+1.0
3,812,673	+		Psyr_3183	0.84	+0.9
3,812,712	+		Psyr_3183	0.86	+2.0
3,812,712	+		Psyr_3183	0.86	-2.4
3,812,713	-		Psyr_3183	0.86	+0.0
3,812,713	-		Psyr_3183	0.86	+1.5
3,813,031	-				+1.5
3,813,035	+				-0.1
3,813,035	+				-1.9
3,813,035	+				+1.5
3,813,035	+				+0.1
3,813,036	-				+0.1
3,813,036	-				+0.2
3,813,036	-				-1.3
3,813,036	-				+0.3
3,813,036	-				+0.0
3,813,036	-				-0.8
3,813,036	-				+0.0
3,813,259	-		Psyr_3184	0.53	-1.9
3,813,280	+		Psyr_3184	0.59	-1.5
3,813,307	+		Psyr_3184	0.66	+0.0
3,813,307	+		Psyr_3184	0.66	-1.5
3,813,307	+		Psyr_3184	0.66	+0.5
3,813,307	+		Psyr_3184	0.66	-0.1
3,813,308	-		Psyr_3184	0.67	-0.1
3,813,308	-		Psyr_3184	0.67	-1.8
3,813,488	+				+0.6
3,813,489	-				+2.2
3,813,532	-				+0.7
3,813,541	-				+0.6
3,813,541	-				+0.6
3,813,619	-				+0.5
3,813,619	-				+2.1
3,813,960	+				-1.3
3,813,960	+				-1.1
3,813,960	+				-2.5
3,813,960	+				-1.3
3,813,960	+				+0.6
3,813,960	+				-1.3
3,813,960	+				-0.2
3,813,960	+				-0.1
3,813,960	+				-1.2
3,813,961	-				-0.7
3,813,961	-				-1.9
3,813,961	-				+0.0
3,814,024	+				+1.5
3,814,051	+				-2.0
3,814,052	-				+0.5
3,814,079	+				-2.8
3,814,079	+				-0.4
3,814,079	+				-1.7
3,814,079	+				-2.8
3,814,079	+				+0.9
3,814,079	+				-2.0
3,814,080	-				+0.0
3,814,080	-				+1.8
3,814,295	+				-0.4
3,814,295	+				+1.5
3,814,295	+				+1.3
3,814,319	+				-1.9
3,814,321	+				+0.9
3,814,321	+				-0.3
3,814,321	+				-1.7