Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3181

Experiment: KB with Tetracycline 0.0015 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Tetracycline 0.0015 ug/ml
3,808,701	+				-0.3
3,808,715	-				-2.0
3,809,094	+		Psyr_3180	0.31	+0.1
3,809,095	-		Psyr_3180	0.31	-1.0
3,809,095	-		Psyr_3180	0.31	-0.1
3,809,095	-		Psyr_3180	0.31	-0.5
3,809,095	-		Psyr_3180	0.31	-1.6
3,809,197	+		Psyr_3180	0.46	-0.0
3,809,239	+		Psyr_3180	0.52	-1.7
3,809,239	+		Psyr_3180	0.52	-0.1
3,809,239	+		Psyr_3180	0.52	-0.1
3,809,271	+		Psyr_3180	0.57	+0.2
3,809,271	+		Psyr_3180	0.57	+1.9
3,809,271	+		Psyr_3180	0.57	-0.1
3,809,272	-		Psyr_3180	0.57	+1.5
3,809,466	+		Psyr_3180	0.85	-1.9
3,809,466	+		Psyr_3180	0.85	-0.6
3,809,467	-		Psyr_3180	0.85	-1.5
3,809,467	-		Psyr_3180	0.85	-1.3
3,809,467	-		Psyr_3180	0.85	+0.0
3,809,467	-		Psyr_3180	0.85	+1.5
3,809,467	-		Psyr_3180	0.85	-1.5
3,809,509	+				+0.5
3,809,579	+				-0.5
3,809,579	+				-0.7
3,809,580	-				-0.7
3,809,580	-				-1.3
3,809,645	-				+0.3
3,809,672	-				+0.1
3,809,729	+		Psyr_3181	0.16	-1.5
3,809,738	-		Psyr_3181	0.17	-1.0
3,809,738	-		Psyr_3181	0.17	+0.0
3,809,786	-		Psyr_3181	0.24	+2.0
3,809,932	+		Psyr_3181	0.44	-1.1
3,809,953	+		Psyr_3181	0.47	+1.5
3,809,953	+		Psyr_3181	0.47	-1.4
3,809,953	+		Psyr_3181	0.47	+0.9
3,809,953	+		Psyr_3181	0.47	+2.0
3,809,953	+		Psyr_3181	0.47	+1.0
3,809,954	-		Psyr_3181	0.48	+0.5
3,809,955	+		Psyr_3181	0.48	+0.5
3,809,955	+		Psyr_3181	0.48	+1.7
3,809,956	-		Psyr_3181	0.48	+0.9
3,810,049	+		Psyr_3181	0.61	+0.1
3,810,232	+		Psyr_3181	0.87	+1.0
3,810,262	+				+0.0
3,810,262	+				+0.5
3,810,262	+				+1.9
3,810,319	+				+0.9
3,810,689	-				+2.0
3,810,689	-				-1.1
3,810,938	-				+0.6
3,810,987	+				+0.5