Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2524

Experiment: KB with Tetracycline 0.0015 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Tetracycline 0.0015 ug/ml
2,933,844	+		Psyr_2523	0.71	-0.4
2,933,922	+		Psyr_2523	0.73	-0.7
2,933,922	+		Psyr_2523	0.73	+0.9
2,933,922	+		Psyr_2523	0.73	+0.3
2,933,922	+		Psyr_2523	0.73	+0.7
2,933,923	-		Psyr_2523	0.73	-1.1
2,933,923	-		Psyr_2523	0.73	+0.1
2,933,923	-		Psyr_2523	0.73	+1.0
2,933,923	-		Psyr_2523	0.73	+0.6
2,933,923	-		Psyr_2523	0.73	+0.3
2,934,080	+		Psyr_2523	0.78	+1.7
2,934,080	+		Psyr_2523	0.78	+1.5
2,934,316	+		Psyr_2523	0.86	-0.8
2,934,360	+		Psyr_2523	0.87	-0.5
2,934,577	+				+0.1
2,934,773	-				+1.5
2,934,808	-				+2.1
2,934,811	+				+1.5
2,934,811	+				-0.7
2,934,811	+				+0.0
2,934,811	+				+1.1
2,934,811	+				-0.1
2,934,812	-				-0.8
2,934,812	-				-0.6
2,934,812	-				-0.6
2,934,878	-		Psyr_2524	0.16	+1.1
2,934,932	+		Psyr_2524	0.22	+0.3
2,935,234	+		Psyr_2524	0.54	+0.2
2,935,235	-		Psyr_2524	0.54	+1.2
2,935,235	-		Psyr_2524	0.54	+2.1
2,935,235	-		Psyr_2524	0.54	+0.1
2,935,384	+		Psyr_2524	0.70	-1.0
2,935,385	-		Psyr_2524	0.71	-0.4
2,935,385	-		Psyr_2524	0.71	+1.1
2,935,555	+		Psyr_2524	0.89	+0.0
2,935,555	+		Psyr_2524	0.89	+2.0
2,935,555	+		Psyr_2524	0.89	+0.6
2,935,556	-		Psyr_2524	0.89	+2.5
2,935,556	-		Psyr_2524	0.89	+2.1
2,935,556	-		Psyr_2524	0.89	-2.9
2,935,556	-		Psyr_2524	0.89	+1.2
2,935,556	-		Psyr_2524	0.89	-0.5
2,935,556	-		Psyr_2524	0.89	-0.7
2,935,609	+				+0.2
2,935,609	+				-0.2
2,935,609	+				+1.5
2,935,609	+				+0.1
2,935,926	+		Psyr_2525	0.28	-2.2
2,935,926	+		Psyr_2525	0.28	-2.2
2,935,926	+		Psyr_2525	0.28	+0.9
2,935,927	-		Psyr_2525	0.28	+0.3
2,935,927	-		Psyr_2525	0.28	-0.7
2,935,927	-		Psyr_2525	0.28	+1.0
2,935,944	+		Psyr_2525	0.30	+0.9
2,935,944	+		Psyr_2525	0.30	-0.1
2,935,945	-		Psyr_2525	0.30	+0.7
2,936,070	+		Psyr_2525	0.44	-0.2
2,936,070	+		Psyr_2525	0.44	+0.5
2,936,071	-		Psyr_2525	0.44	-1.1
2,936,071	-		Psyr_2525	0.44	+1.0
2,936,071	-		Psyr_2525	0.44	-0.7
2,936,071	-		Psyr_2525	0.44	+1.0
2,936,071	-		Psyr_2525	0.44	+0.9
2,936,073	+		Psyr_2525	0.44	+1.1
2,936,073	+		Psyr_2525	0.44	+0.3
2,936,073	+		Psyr_2525	0.44	-1.5
2,936,073	+		Psyr_2525	0.44	-0.4
2,936,074	-		Psyr_2525	0.44	+1.9
2,936,074	-		Psyr_2525	0.44	+1.5
2,936,074	-		Psyr_2525	0.44	-0.1
2,936,074	-		Psyr_2525	0.44	+1.5
2,936,190	+		Psyr_2525	0.57	-1.2
2,936,367	+		Psyr_2525	0.76	-1.0
2,936,368	-		Psyr_2525	0.76	+2.2