Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1342

Experiment: KB with Tetracycline 0.0015 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Tetracycline 0.0015 ug/ml
1,521,521	+		Psyr_1341	0.80	+0.7
1,521,521	+		Psyr_1341	0.80	-0.6
1,521,522	-		Psyr_1341	0.80	-1.5
1,521,522	-		Psyr_1341	0.80	+0.7
1,522,044	+				+0.7
1,522,064	-				+1.5
1,522,506	+		Psyr_1342	0.49	-0.3
1,522,506	+		Psyr_1342	0.49	+0.3
1,522,507	-		Psyr_1342	0.49	+1.5
1,522,507	-		Psyr_1342	0.49	+1.4
1,522,594	-		Psyr_1342	0.60	+1.0
1,522,719	+		Psyr_1342	0.76	-0.3
1,522,720	-		Psyr_1342	0.77	-0.2
1,522,720	-		Psyr_1342	0.77	+0.6
1,522,720	-		Psyr_1342	0.77	-0.2
1,522,759	+		Psyr_1342	0.81	-1.4
1,522,759	+		Psyr_1342	0.81	+0.8
1,522,759	+		Psyr_1342	0.81	+0.3
1,522,759	+		Psyr_1342	0.81	-0.3
1,522,759	+		Psyr_1342	0.81	+0.2
1,522,759	+		Psyr_1342	0.81	-0.4
1,522,759	+		Psyr_1342	0.81	-1.3
1,522,759	+		Psyr_1342	0.81	-2.1
1,522,760	-		Psyr_1342	0.82	+2.1
1,522,760	-		Psyr_1342	0.82	-1.1
1,522,760	-		Psyr_1342	0.82	-0.9
1,522,760	-		Psyr_1342	0.82	-0.4
1,522,760	-		Psyr_1342	0.82	+1.4
1,522,761	+		Psyr_1342	0.82	-0.1
1,522,761	+		Psyr_1342	0.82	+1.7
1,522,761	+		Psyr_1342	0.82	+0.7
1,522,761	+		Psyr_1342	0.82	+0.3
1,522,761	+		Psyr_1342	0.82	-0.9
1,522,761	+		Psyr_1342	0.82	+0.5
1,522,761	+		Psyr_1342	0.82	+0.5
1,522,761	+		Psyr_1342	0.82	-0.1
1,522,761	+		Psyr_1342	0.82	-0.2
1,522,762	-		Psyr_1342	0.82	-1.1
1,522,762	-		Psyr_1342	0.82	+0.0
1,522,762	-		Psyr_1342	0.82	-1.0
1,522,762	-		Psyr_1342	0.82	-0.8
1,522,762	-		Psyr_1342	0.82	+0.4
1,522,762	-		Psyr_1342	0.82	-1.8
1,522,762	-		Psyr_1342	0.82	+1.3
1,522,762	-		Psyr_1342	0.82	-0.6
1,522,762	-		Psyr_1342	0.82	+0.1
1,522,762	-		Psyr_1342	0.82	-0.1
1,522,762	-		Psyr_1342	0.82	+0.4
1,522,762	-		Psyr_1342	0.82	-1.2
1,522,762	-		Psyr_1342	0.82	+0.0
1,522,903	+				-0.2
1,522,994	+				+0.7
1,522,994	+				-0.6
1,522,994	+				+1.9
1,522,995	-				+0.1
1,522,995	-				-0.3
1,522,995	-				-0.8
1,522,996	+				-0.6
1,522,997	-				+0.7
1,523,066	+				-0.5
1,523,066	+				-0.8
1,523,066	+				+0.0
1,523,071	+				+1.1