Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_0179

Experiment: KB with Tetracycline 0.0015 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Tetracycline 0.0015 ug/ml
193,143	+				+0.3
193,143	+				+0.1
193,143	+				+0.2
193,144	-				-0.7
193,144	-				-0.2
193,144	-				+0.3
193,144	-				+1.9
193,144	-				-0.9
193,194	-				+0.5
193,194	-				+0.5
193,241	+				-1.2
193,301	+				-0.6
193,301	+				-0.1
193,301	+				-1.1
193,301	+				-0.5
193,301	+				+1.1
193,301	+				+1.1
193,302	-				+0.1
193,302	-				+0.9
193,302	-				-0.7
193,302	-				-2.1
193,302	-				-0.4
193,302	-				+0.9
193,302	-				+0.6
193,302	-				-0.6
193,302	-				-0.1
193,302	-				-0.7
193,440	-				+0.1
193,559	+				-0.1
193,560	-				+0.9
193,560	-				-0.2
193,560	-				+0.3
193,583	+				-0.3
193,583	+				+0.2
193,584	-				+0.9
193,584	-				-0.9
193,727	+		Psyr_0178	0.43	-0.2
193,746	-		Psyr_0178	0.48	+1.2
193,746	-		Psyr_0178	0.48	+0.8
193,918	+		Psyr_0178	0.90	-0.1
193,918	+		Psyr_0178	0.90	-0.8
193,918	+		Psyr_0178	0.90	+0.6
193,918	+		Psyr_0178	0.90	+0.7
193,919	-				+1.8
193,919	-				+0.8
193,919	-				-1.4
193,979	-				-1.6
193,979	-				+0.7
193,991	+				-0.1
193,991	+				+0.4
193,991	+				+0.9
193,992	-				-0.4
194,071	+				-0.2
194,071	+				+0.8
194,072	-				-0.3
194,075	+				-0.1
194,075	+				+0.2
194,075	+				-2.5
194,075	+				+0.3
194,075	+				+0.2
194,075	+				-0.0
194,075	+				-0.2
194,076	-				+1.9
194,076	-				+0.8
194,076	-				-1.1
194,076	-				+1.0
194,076	-				+0.4
194,258	+		Psyr_0179	0.69	+0.8
194,258	+		Psyr_0179	0.69	-0.5
194,449	-		Psyr_0180	0.35	+0.1
194,518	+		Psyr_0180	0.56	-1.1
194,518	+		Psyr_0180	0.56	-0.1
194,519	-		Psyr_0180	0.56	-0.4
194,519	-		Psyr_0180	0.56	+1.3
194,553	-		Psyr_0180	0.66	-0.7
194,553	-		Psyr_0180	0.66	-0.7
194,600	+		Psyr_0180	0.80	-0.3
194,600	+		Psyr_0180	0.80	-0.6
194,601	-		Psyr_0180	0.80	-0.2
194,601	-		Psyr_0180	0.80	-2.0
194,680	+				+0.9
194,680	+				+0.9
194,681	-				+0.3
194,694	+				-1.8
194,694	+				-0.4
194,695	-				-0.3
194,695	-				-0.0
194,713	-				+0.0
194,713	-				-0.1
194,741	+				-0.9
194,742	-				+0.0
194,742	-				-0.5
194,742	-				+0.8
194,742	-				+0.6
194,770	+				+0.5
194,786	+				-1.8
194,786	+				+1.2
194,786	+				+1.9
194,786	+				+0.3
194,786	+				+0.5
194,786	+				-0.4
194,787	-				+0.8
194,787	-				+0.6
194,787	-				+0.5
194,787	-				-0.5
194,787	-				-0.5
194,787	-				-1.3
194,840	+				-0.5
194,863	+				-2.8
194,863	+				+0.2
194,863	+				+1.0
194,865	+				-1.7
194,879	+				+0.3
194,879	+				+1.2
194,888	+				+1.5
194,985	+		Psyr_0181	0.55	+0.3