Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_0133

Experiment: KB with Tetracycline 0.0015 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Tetracycline 0.0015 ug/ml
139,876	+		Psyr_0131	0.43	+0.8
139,877	-		Psyr_0131	0.43	-0.8
140,014	-		Psyr_0131	0.63	-0.4
140,059	+		Psyr_0131	0.70	+0.3
140,059	+		Psyr_0131	0.70	-0.6
140,059	+		Psyr_0131	0.70	+0.8
140,060	-		Psyr_0131	0.70	-0.7
140,060	-		Psyr_0131	0.70	+0.4
140,060	-		Psyr_0131	0.70	-0.0
140,205	+				-0.5
140,205	+				+0.6
140,206	-				+0.6
140,206	-				-0.8
140,206	-				+0.2
140,206	-				-0.5
140,305	+				-0.1
140,305	+				-0.7
140,305	+				+0.6
140,305	+				+1.6
140,305	+				-0.5
140,305	+				+1.2
140,306	-				-0.4
140,306	-				-0.6
140,306	-				-1.0
140,306	-				-0.6
140,306	-				-1.5
140,306	-				+0.3
140,306	-				-0.9
140,355	+				-1.0
140,356	-				-0.4
140,356	-				+1.1
140,356	-				+1.9
140,356	-				-0.2
140,435	+		Psyr_0132	0.29	+1.1
140,435	+		Psyr_0132	0.29	-0.7
140,435	+		Psyr_0132	0.29	+0.5
140,435	+		Psyr_0132	0.29	+0.8
140,436	-		Psyr_0132	0.30	+0.3
140,436	-		Psyr_0132	0.30	+1.9
140,436	-		Psyr_0132	0.30	+0.3
140,593	+				+0.3
140,593	+				-0.2
140,593	+				+0.6
140,593	+				-0.1
140,593	+				-0.7
140,594	-				-0.0
140,594	-				-0.4
140,594	-				-0.1
140,594	-				-2.1
140,594	-				+0.3
140,594	-				-0.4
140,594	-				-0.0
140,594	-				-0.4
140,594	-				+1.7
140,594	-				-2.0
140,714	-				-0.8
140,714	-				-0.5
140,806	+		Psyr_0133	0.24	-0.1
140,806	+		Psyr_0133	0.24	-0.7
140,806	+		Psyr_0133	0.24	+1.3
140,807	-		Psyr_0133	0.24	-1.9
140,807	-		Psyr_0133	0.24	-1.1
140,807	-		Psyr_0133	0.24	+2.3
140,807	-		Psyr_0133	0.24	-0.2
140,854	+		Psyr_0133	0.34	-0.9
140,854	+		Psyr_0133	0.34	-1.4
140,854	+		Psyr_0133	0.34	+0.5
140,854	+		Psyr_0133	0.34	-0.3
140,854	+		Psyr_0133	0.34	+3.2
140,855	-		Psyr_0133	0.34	-1.2
140,855	-		Psyr_0133	0.34	+0.2
140,855	-		Psyr_0133	0.34	-0.6
140,855	-		Psyr_0133	0.34	+1.2
140,855	-		Psyr_0133	0.34	+0.2
140,855	-		Psyr_0133	0.34	+0.9
140,907	+		Psyr_0133	0.45	-0.3
141,182	-				-1.1
141,190	+				+1.1
141,190	+				+0.1
141,190	+				+1.0
141,190	+				-0.8
141,190	+				-0.7
141,190	+				+0.4
141,190	+				-0.1
141,190	+				+0.2
141,191	-				-0.9
141,191	-				-1.9
141,233	-				-0.9
141,573	+				-0.1
141,574	-				+0.2
141,813	+				-1.2
141,813	+				+0.2
141,813	+				+0.4
141,813	+				-0.5
141,813	+				-0.7
141,813	+				+0.2
141,814	-				-0.4
141,814	-				-0.4
141,814	-				-0.1
141,814	-				+1.1
141,814	-				-1.9
141,890	-				-2.1
141,949	-				+0.9
141,949	-				+0.9
141,949	-				-0.4
141,949	-				-0.0
141,980	+				+1.9
141,981	-				+0.9
142,032	+				+1.7
142,032	+				-2.3
142,067	+				+0.5
142,077	-				+0.3
142,085	-				-1.5