Strain Fitness in Pseudomonas sp. RS175 around PFR28_04447

Experiment: Glycerol carbon 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycerol carbon 20 mM
5,060,353	+				+0.3
5,060,354	-				-3.3
5,060,354	-				-0.1
5,060,360	+				+0.3
5,060,603	+		PFR28_04446	0.43	+1.0
5,060,603	+		PFR28_04446	0.43	-0.2
5,060,603	+		PFR28_04446	0.43	-0.3
5,060,603	+		PFR28_04446	0.43	-0.4
5,060,603	+		PFR28_04446	0.43	+0.2
5,060,604	-		PFR28_04446	0.43	-0.4
5,060,604	-		PFR28_04446	0.43	-1.0
5,060,670	-		PFR28_04446	0.52	-0.6
5,060,727	+		PFR28_04446	0.60	-0.2
5,060,727	+		PFR28_04446	0.60	-2.1
5,060,727	+		PFR28_04446	0.60	-0.2
5,060,727	+		PFR28_04446	0.60	-1.1
5,060,728	-		PFR28_04446	0.61	+0.3
5,060,728	-		PFR28_04446	0.61	+0.1
5,060,728	-		PFR28_04446	0.61	+1.3
5,060,728	-		PFR28_04446	0.61	+0.9
5,060,728	-		PFR28_04446	0.61	-0.0
5,060,728	-		PFR28_04446	0.61	+0.6
5,060,728	-		PFR28_04446	0.61	+0.4
5,060,728	-		PFR28_04446	0.61	+0.7
5,060,728	-		PFR28_04446	0.61	+0.2
5,060,806	+		PFR28_04446	0.71	+0.1
5,060,806	+		PFR28_04446	0.71	+1.5
5,060,806	+		PFR28_04446	0.71	+0.0
5,060,806	+		PFR28_04446	0.71	+2.6
5,060,806	+		PFR28_04446	0.71	+0.7
5,060,806	+		PFR28_04446	0.71	+1.0
5,060,806	+		PFR28_04446	0.71	+0.3
5,060,806	+		PFR28_04446	0.71	-0.2
5,060,806	+		PFR28_04446	0.71	+0.6
5,060,806	+		PFR28_04446	0.71	+0.1
5,060,806	+		PFR28_04446	0.71	-0.0
5,060,806	+		PFR28_04446	0.71	+0.7
5,060,807	-		PFR28_04446	0.72	+0.4
5,060,807	-		PFR28_04446	0.72	+0.3
5,060,807	-		PFR28_04446	0.72	-0.7
5,060,807	-		PFR28_04446	0.72	+0.0
5,060,807	-		PFR28_04446	0.72	+0.4
5,060,948	+				+0.7
5,060,948	+				+0.3
5,060,948	+				-0.0
5,060,948	+				-1.4
5,060,948	+				-0.7
5,060,949	-				-0.1
5,061,038	+				+0.3
5,061,038	+				+1.7
5,061,038	+				-0.2
5,061,038	+				-1.9
5,061,038	+				+0.5
5,061,038	+				+0.2
5,061,039	-				+0.6
5,061,039	-				+1.4
5,061,039	-				+0.7
5,061,039	-				+0.1
5,061,039	-				+0.5
5,061,039	-				-0.2
5,061,227	+				+2.0
5,061,227	+				-1.0
5,061,228	-				+0.2
5,061,296	+				+0.3
5,061,296	+				+0.5
5,061,296	+				-0.8
5,061,296	+				-0.2
5,061,296	+				-0.6
5,061,296	+				+0.3
5,061,296	+				+1.6
5,061,296	+				-0.3
5,061,297	-				-0.1
5,061,297	-				-0.0
5,061,297	-				-0.1
5,061,297	-				+0.1
5,061,297	-				-0.3
5,061,297	-				+0.6
5,061,297	-				-1.4
5,061,297	-				-1.2
5,061,297	-				+0.6
5,061,540	-		PFR28_04447	0.17	+0.6
5,061,704	+		PFR28_04447	0.22	+0.0
5,061,705	-		PFR28_04447	0.22	+1.0
5,061,705	-		PFR28_04447	0.22	+0.5
5,061,705	-		PFR28_04447	0.22	-0.0
5,061,705	-		PFR28_04447	0.22	+1.2
5,061,705	-		PFR28_04447	0.22	-0.6
5,061,705	-		PFR28_04447	0.22	+0.1
5,061,705	-		PFR28_04447	0.22	+0.4
5,061,705	-		PFR28_04447	0.22	+0.3
5,061,705	-		PFR28_04447	0.22	-1.0
5,061,705	-		PFR28_04447	0.22	-1.4
5,061,809	+		PFR28_04447	0.26	-1.4
5,061,809	+		PFR28_04447	0.26	-1.4
5,061,809	+		PFR28_04447	0.26	-0.0
5,061,809	+		PFR28_04447	0.26	+0.1
5,061,809	+		PFR28_04447	0.26	-0.8
5,061,810	-		PFR28_04447	0.26	-0.6
5,061,810	-		PFR28_04447	0.26	-0.7
5,061,810	-		PFR28_04447	0.26	-1.6
5,061,810	-		PFR28_04447	0.26	+0.2
5,062,097	+		PFR28_04447	0.35	+1.6
5,062,097	+		PFR28_04447	0.35	-0.1
5,062,098	-		PFR28_04447	0.35	-2.5
5,062,183	-		PFR28_04447	0.38	-1.4
5,062,227	-		PFR28_04447	0.39	-1.8
5,062,227	-		PFR28_04447	0.39	+1.0
5,062,421	+		PFR28_04447	0.45	+0.4
5,062,421	+		PFR28_04447	0.45	+1.1
5,062,421	+		PFR28_04447	0.45	+0.0
5,062,421	+		PFR28_04447	0.45	+2.6
5,062,421	+		PFR28_04447	0.45	-3.7
5,062,421	+		PFR28_04447	0.45	-0.5
5,062,422	-		PFR28_04447	0.45	+0.2
5,062,422	-		PFR28_04447	0.45	-0.3
5,062,422	-		PFR28_04447	0.45	+0.7
5,062,727	+		PFR28_04447	0.55	+0.2
5,062,728	-		PFR28_04447	0.55	-0.1
5,062,733	+		PFR28_04447	0.55	+1.6
5,062,733	+		PFR28_04447	0.55	-0.1
5,062,733	+		PFR28_04447	0.55	+0.3
5,062,733	+		PFR28_04447	0.55	-0.2
5,062,733	+		PFR28_04447	0.55	+1.2
5,062,733	+		PFR28_04447	0.55	-0.0
5,062,733	+		PFR28_04447	0.55	+0.2
5,062,733	+		PFR28_04447	0.55	+0.0
5,062,733	+		PFR28_04447	0.55	-0.2
5,062,733	+		PFR28_04447	0.55	-1.4
5,062,733	+		PFR28_04447	0.55	-0.5
5,062,733	+		PFR28_04447	0.55	+1.3
5,062,733	+		PFR28_04447	0.55	+0.2
5,062,733	+		PFR28_04447	0.55	+0.9
5,062,733	+		PFR28_04447	0.55	+1.4
5,062,733	+		PFR28_04447	0.55	-1.2
5,062,733	+		PFR28_04447	0.55	-2.1
5,062,733	+		PFR28_04447	0.55	-0.2
5,062,733	+		PFR28_04447	0.55	+0.0
5,062,733	+		PFR28_04447	0.55	+0.5
5,062,733	+		PFR28_04447	0.55	-0.5
5,062,733	+		PFR28_04447	0.55	+0.1
5,062,733	+		PFR28_04447	0.55	-0.4
5,062,733	+		PFR28_04447	0.55	-0.0
5,062,733	+		PFR28_04447	0.55	+0.6
5,062,733	+		PFR28_04447	0.55	-0.4
5,062,733	+		PFR28_04447	0.55	-1.1
5,062,733	+		PFR28_04447	0.55	+0.1
5,062,734	-		PFR28_04447	0.56	-2.8
5,062,734	-		PFR28_04447	0.56	+0.4
5,062,734	-		PFR28_04447	0.56	+1.4
5,062,734	-		PFR28_04447	0.56	-1.4
5,062,734	-		PFR28_04447	0.56	+0.7
5,062,734	-		PFR28_04447	0.56	+0.7
5,062,734	-		PFR28_04447	0.56	-0.0
5,062,734	-		PFR28_04447	0.56	-0.1
5,062,734	-		PFR28_04447	0.56	+0.9
5,062,734	-		PFR28_04447	0.56	-0.8
5,062,734	-		PFR28_04447	0.56	-0.6
5,062,734	-		PFR28_04447	0.56	-2.1
5,062,734	-		PFR28_04447	0.56	-0.0
5,062,734	-		PFR28_04447	0.56	+0.6
5,062,734	-		PFR28_04447	0.56	+0.4
5,062,734	-		PFR28_04447	0.56	+0.2
5,062,734	-		PFR28_04447	0.56	+0.2
5,062,734	-		PFR28_04447	0.56	+0.2
5,062,734	-		PFR28_04447	0.56	+0.5
5,062,734	-		PFR28_04447	0.56	+1.4
5,062,734	-		PFR28_04447	0.56	+0.2
5,062,734	-		PFR28_04447	0.56	-0.4
5,062,734	-		PFR28_04447	0.56	-1.0
5,062,734	-		PFR28_04447	0.56	+0.7
5,062,734	-		PFR28_04447	0.56	+0.3
5,062,734	-		PFR28_04447	0.56	+0.6
5,062,734	-		PFR28_04447	0.56	-1.1
5,062,734	-		PFR28_04447	0.56	-0.6
5,062,734	-		PFR28_04447	0.56	-0.1
5,062,734	-		PFR28_04447	0.56	-0.2
5,062,734	-		PFR28_04447	0.56	-1.5
5,063,405	+		PFR28_04447	0.77	-0.2
5,063,486	+		PFR28_04447	0.80	+0.6
5,063,487	-		PFR28_04447	0.80	+1.4
5,063,487	-		PFR28_04447	0.80	+1.4
5,063,487	-		PFR28_04447	0.80	+0.1
5,063,513	+		PFR28_04447	0.81	+0.0
5,063,513	+		PFR28_04447	0.81	-0.4
5,063,514	-		PFR28_04447	0.81	-0.4
5,063,514	-		PFR28_04447	0.81	-0.8
5,063,514	-		PFR28_04447	0.81	+1.9
5,063,534	+		PFR28_04447	0.81	+0.3
5,063,535	-		PFR28_04447	0.81	-0.8
5,063,535	-		PFR28_04447	0.81	+0.3
5,063,588	+		PFR28_04447	0.83	-0.4
5,063,588	+		PFR28_04447	0.83	-3.4
5,063,588	+		PFR28_04447	0.83	-0.2
5,063,588	+		PFR28_04447	0.83	-2.5
5,063,589	-		PFR28_04447	0.83	+0.4
5,063,589	-		PFR28_04447	0.83	+0.7
5,063,589	-		PFR28_04447	0.83	-0.4
5,063,589	-		PFR28_04447	0.83	+1.4
5,063,589	-		PFR28_04447	0.83	+0.3
5,063,589	-		PFR28_04447	0.83	+0.6
5,063,589	-		PFR28_04447	0.83	-1.4
5,063,589	-		PFR28_04447	0.83	+0.6
5,063,747	+		PFR28_04447	0.88	-1.0
5,063,775	+		PFR28_04447	0.89	+1.1
5,063,777	+		PFR28_04447	0.89	-0.1
5,063,777	+		PFR28_04447	0.89	+0.7
5,063,777	+		PFR28_04447	0.89	+0.7
5,063,777	+		PFR28_04447	0.89	-2.0
5,063,777	+		PFR28_04447	0.89	+0.1
5,063,777	+		PFR28_04447	0.89	-0.3
5,063,778	-		PFR28_04447	0.89	-0.1
5,063,778	-		PFR28_04447	0.89	-1.0
5,063,778	-		PFR28_04447	0.89	-0.1
5,063,778	-		PFR28_04447	0.89	+1.0
5,063,843	+				-0.1
5,063,843	+				-0.7
5,063,844	-				+1.1
5,063,844	-				+0.9
5,063,844	-				+0.9
5,063,858	+				+0.1
5,063,858	+				+0.3
5,063,858	+				-0.2
5,063,858	+				+1.6
5,063,858	+				+0.8
5,063,858	+				+0.5
5,063,858	+				-2.0
5,063,858	+				+0.0
5,063,858	+				-0.1
5,063,858	+				-0.3
5,063,858	+				+0.1
5,063,858	+				-0.2
5,063,858	+				+0.2
5,063,858	+				+0.8
5,063,858	+				+1.4
5,063,859	-				-0.1
5,063,859	-				-0.8
5,063,859	-				-1.4
5,063,859	-				-1.4
5,063,859	-				-0.0
5,063,859	-				+0.1
5,063,859	-				-0.2
5,063,859	-				-0.3
5,063,859	-				-1.9
5,063,859	-				+0.2
5,063,859	-				+1.0
5,063,859	-				-0.1
5,063,859	-				+0.4
5,063,859	-				+0.1
5,063,859	-				-0.9
5,063,861	+				+0.6
5,063,861	+				+0.4
5,063,861	+				+0.5
5,063,861	+				-0.8
5,063,862	-				+0.4
5,063,862	-				-0.6
5,063,862	-				-0.2
5,063,862	-				-2.7
5,064,035	+				-1.4
5,064,035	+				+0.2
5,064,036	-				+0.6
5,064,036	-				+0.4
5,064,036	-				-0.9
5,064,081	-				-0.6
5,064,143	+				+0.4
5,064,143	+				+0.1
5,064,277	+		PFR28_04448	0.24	+0.3
5,064,277	+		PFR28_04448	0.24	+0.8
5,064,277	+		PFR28_04448	0.24	-0.7
5,064,277	+		PFR28_04448	0.24	-1.5
5,064,277	+		PFR28_04448	0.24	-0.6
5,064,277	+		PFR28_04448	0.24	+0.3
5,064,277	+		PFR28_04448	0.24	-1.8
5,064,278	-		PFR28_04448	0.25	-0.9
5,064,278	-		PFR28_04448	0.25	+0.3
5,064,278	-		PFR28_04448	0.25	+0.1
5,064,424	+		PFR28_04448	0.46	+0.2
5,064,424	+		PFR28_04448	0.46	-3.6
5,064,424	+		PFR28_04448	0.46	+0.4
5,064,424	+		PFR28_04448	0.46	-0.6
5,064,424	+		PFR28_04448	0.46	-1.1
5,064,425	-		PFR28_04448	0.46	-0.3
5,064,425	-		PFR28_04448	0.46	+0.0
5,064,425	-		PFR28_04448	0.46	+0.3
5,064,425	-		PFR28_04448	0.46	-0.0
5,064,425	-		PFR28_04448	0.46	-0.5
5,064,472	+		PFR28_04448	0.53	-0.9
5,064,472	+		PFR28_04448	0.53	+0.6
5,064,472	+		PFR28_04448	0.53	-0.4
5,064,473	-		PFR28_04448	0.53	-1.0
5,064,473	-		PFR28_04448	0.53	+0.7
5,064,473	-		PFR28_04448	0.53	-0.4
5,064,473	-		PFR28_04448	0.53	+0.2
5,064,473	-		PFR28_04448	0.53	+1.1
5,064,628	+		PFR28_04448	0.76	+0.2
5,064,628	+		PFR28_04448	0.76	-1.7
5,064,628	+		PFR28_04448	0.76	-0.0
5,064,628	+		PFR28_04448	0.76	-0.1
5,064,628	+		PFR28_04448	0.76	-0.5
5,064,628	+		PFR28_04448	0.76	+0.6
5,064,628	+		PFR28_04448	0.76	-0.6
5,064,628	+		PFR28_04448	0.76	+0.3
5,064,628	+		PFR28_04448	0.76	-0.6
5,064,629	-		PFR28_04448	0.76	-0.3
5,064,629	-		PFR28_04448	0.76	+0.0
5,064,629	-		PFR28_04448	0.76	-1.0
5,064,629	-		PFR28_04448	0.76	+0.3
5,064,629	-		PFR28_04448	0.76	+2.0
5,064,691	+		PFR28_04448	0.86	+0.0
5,064,691	+		PFR28_04448	0.86	-0.4
5,064,691	+		PFR28_04448	0.86	-1.3
5,064,692	-		PFR28_04448	0.86	+1.8
5,064,692	-		PFR28_04448	0.86	-0.2
5,064,844	+				-0.3
5,064,844	+				+1.1
5,064,844	+				+0.0
5,064,844	+				+0.1
5,064,844	+				+0.5
5,064,844	+				+0.2
5,064,844	+				+0.6
5,064,844	+				+0.0
5,064,845	-				-0.5
5,064,845	-				-1.3
5,064,845	-				-0.0
5,064,845	-				-0.6
5,064,845	-				-0.7
5,064,845	-				+0.5
5,064,845	-				+0.4