Strain Fitness in Pseudomonas sp. S08-1

Strain Fitness in Pseudomonas sp. S08-1 around OH686_22905

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	D-Glucose (C)
				remove
4,641,436	+	OH686_22885	0.81	+0.5
4,641,436	+	OH686_22885	0.81	+0.0
4,641,436	+	OH686_22885	0.81	-1.2
4,641,436	+	OH686_22885	0.81	-0.6
4,641,436	+	OH686_22885	0.81	+0.5
4,641,437	-	OH686_22885	0.81	-0.3
4,641,437	-	OH686_22885	0.81	+0.4
4,641,437	-	OH686_22885	0.81	+0.4
4,641,437	-	OH686_22885	0.81	-0.5
4,641,437	-	OH686_22885	0.81	-0.4
4,641,445	+	OH686_22885	0.82	-0.5
4,641,445	+	OH686_22885	0.82	-0.1
4,641,445	+	OH686_22885	0.82	+0.4
4,641,445	+	OH686_22885	0.82	-0.2
4,641,445	+	OH686_22885	0.82	+0.3
4,641,445	+	OH686_22885	0.82	-0.2
4,641,445	+	OH686_22885	0.82	-0.2
4,641,445	+	OH686_22885	0.82	+0.3
4,641,445	+	OH686_22885	0.82	+0.7
4,641,445	+	OH686_22885	0.82	-1.9
4,641,445	+	OH686_22885	0.82	+0.6
4,641,445	+	OH686_22885	0.82	+1.1
4,641,446	-	OH686_22885	0.82	+0.7
4,641,446	-	OH686_22885	0.82	-0.5
4,641,446	-	OH686_22885	0.82	+0.7
4,641,446	-	OH686_22885	0.82	+1.0
4,641,446	-	OH686_22885	0.82	-1.1
4,641,446	-	OH686_22885	0.82	-0.3
4,641,446	-	OH686_22885	0.82	-1.8
4,641,446	-	OH686_22885	0.82	+0.9
4,641,446	-	OH686_22885	0.82	-0.2
4,641,545	+	OH686_22885	0.90	+0.3
4,641,545	+	OH686_22885	0.90	-1.3
4,641,545	+	OH686_22885	0.90	-0.2
4,641,545	+	OH686_22885	0.90	+0.6
4,641,546	-	OH686_22885	0.90	+0.4
4,641,546	-	OH686_22885	0.90	-1.0
4,641,546	-	OH686_22885	0.90	+1.8
4,641,546	-	OH686_22885	0.90	+2.5
4,641,546	-	OH686_22885	0.90	-0.0
4,641,546	-	OH686_22885	0.90	-0.5
4,641,612	+			-0.6
4,641,612	+			+0.5
4,641,631	+			-0.8
4,641,631	+			-1.3
4,641,631	+			-1.5
4,641,631	+			-0.9
4,641,631	+			+0.1
4,641,632	-			-0.5
4,641,632	-			+0.2
4,641,632	-			+0.8
4,641,632	-			-0.2
4,641,632	-			-0.2
4,641,632	-			+1.2
4,641,632	-			-0.1
4,641,658	+			+0.2
4,641,659	-			-0.2
4,641,696	+	OH686_22890	0.12	+0.2
4,641,696	+	OH686_22890	0.12	+0.4
4,641,743	+	OH686_22890	0.30	+0.0
4,641,743	+	OH686_22890	0.30	+0.1
4,641,744	-	OH686_22890	0.31	-0.3
4,641,744	-	OH686_22890	0.31	+0.5
4,641,744	-	OH686_22890	0.31	+0.0
4,641,744	-	OH686_22890	0.31	+0.0
4,641,744	-	OH686_22890	0.31	+0.2
4,641,744	-	OH686_22890	0.31	-0.1
4,641,744	-	OH686_22890	0.31	-0.1
4,641,755	+	OH686_22890	0.35	-0.4
4,641,755	+	OH686_22890	0.35	+0.7
4,641,756	-	OH686_22890	0.35	-0.2
4,641,778	+	OH686_22890	0.44	-1.4
4,641,817	+	OH686_22890	0.60	+0.3
4,641,817	+	OH686_22890	0.60	-0.1
4,641,817	+	OH686_22890	0.60	+0.2
4,641,817	+	OH686_22890	0.60	+0.2
4,641,817	+	OH686_22890	0.60	-1.2
4,641,817	+	OH686_22890	0.60	+1.2
4,641,817	+	OH686_22890	0.60	-0.5
4,641,817	+	OH686_22890	0.60	+0.3
4,641,817	+	OH686_22890	0.60	-2.3
4,641,817	+	OH686_22890	0.60	-0.2
4,641,817	+	OH686_22890	0.60	+1.2
4,641,817	+	OH686_22890	0.60	-0.9
4,641,817	+	OH686_22890	0.60	-0.2
4,641,817	+	OH686_22890	0.60	-1.0
4,641,818	-	OH686_22890	0.60	+0.5
4,641,818	-	OH686_22890	0.60	-0.1
4,641,818	-	OH686_22890	0.60	+0.5
4,641,818	-	OH686_22890	0.60	+0.8
4,641,818	-	OH686_22890	0.60	-1.2
4,641,818	-	OH686_22890	0.60	+0.3
4,641,943	+	OH686_22895	0.15	-1.0
4,641,943	+	OH686_22895	0.15	-0.4
4,641,943	+	OH686_22895	0.15	-0.9
4,641,943	+	OH686_22895	0.15	-1.3
4,641,943	+	OH686_22895	0.15	-1.4
4,641,943	+	OH686_22895	0.15	-1.1
4,641,943	+	OH686_22895	0.15	-0.4
4,641,943	+	OH686_22895	0.15	-3.0
4,641,943	+	OH686_22895	0.15	+0.2
4,641,943	+	OH686_22895	0.15	+0.2
4,641,943	+	OH686_22895	0.15	-0.1
4,641,943	+	OH686_22895	0.15	+0.4
4,641,943	+	OH686_22895	0.15	-1.3
4,641,943	+	OH686_22895	0.15	-0.8
4,641,943	+	OH686_22895	0.15	+1.6
4,641,943	+	OH686_22895	0.15	-0.7
4,641,943	+	OH686_22895	0.15	+0.1
4,641,943	+	OH686_22895	0.15	-0.6
4,641,943	+	OH686_22895	0.15	+0.5
4,641,943	+	OH686_22895	0.15	-0.1
4,641,943	+	OH686_22895	0.15	-0.0
4,641,943	+	OH686_22895	0.15	-0.3
4,641,943	+	OH686_22895	0.15	+0.5
4,641,943	+	OH686_22895	0.15	-1.0
4,641,943	+	OH686_22895	0.15	-0.1
4,641,943	+	OH686_22895	0.15	+1.3
4,641,944	-	OH686_22895	0.15	+0.2
4,641,944	-	OH686_22895	0.15	-0.2
4,641,944	-	OH686_22895	0.15	-0.5
4,641,944	-	OH686_22895	0.15	+0.0
4,641,944	-	OH686_22895	0.15	-0.4
4,641,944	-	OH686_22895	0.15	+0.1
4,641,944	-	OH686_22895	0.15	-0.5
4,641,944	-	OH686_22895	0.15	+0.2
4,641,944	-	OH686_22895	0.15	-0.1
4,641,944	-	OH686_22895	0.15	-0.7
4,641,944	-	OH686_22895	0.15	-0.0
4,641,944	-	OH686_22895	0.15	+0.5
4,641,944	-	OH686_22895	0.15	+0.0
4,641,944	-	OH686_22895	0.15	+0.4
4,641,944	-	OH686_22895	0.15	+0.1
4,641,944	-	OH686_22895	0.15	+0.9
4,641,944	-	OH686_22895	0.15	+1.3
4,641,944	-	OH686_22895	0.15	-0.9
4,641,944	-	OH686_22895	0.15	-0.2
4,641,944	-	OH686_22895	0.15	-1.6
4,641,944	-	OH686_22895	0.15	-0.1
4,641,944	-	OH686_22895	0.15	-0.2
4,641,944	-	OH686_22895	0.15	+0.5
4,641,962	+	OH686_22895	0.25	-0.3
4,641,963	-	OH686_22895	0.25	-0.5
4,641,963	-	OH686_22895	0.25	+0.8
4,641,963	-	OH686_22895	0.25	+0.6
4,642,125	-			-0.6
4,642,138	-			+0.5
4,642,217	+			-0.5
4,642,218	-			+0.5
4,642,248	+			+0.4
4,642,248	+			+0.4
4,642,249	-			-0.4
4,642,280	+	OH686_22900	0.20	-0.0
4,642,280	+	OH686_22900	0.20	-0.7
4,642,280	+	OH686_22900	0.20	+1.0
4,642,280	+	OH686_22900	0.20	+0.7
4,642,281	-	OH686_22900	0.21	+0.3
4,642,281	-	OH686_22900	0.21	+0.4
4,642,281	-	OH686_22900	0.21	-0.2
4,642,362	+	OH686_22900	0.84	-0.5
4,642,363	-	OH686_22900	0.84	-0.4
4,642,363	-	OH686_22900	0.84	+0.2
4,642,363	-	OH686_22900	0.84	+0.2
4,642,363	-	OH686_22900	0.84	-1.3
4,642,380	+			-0.2
4,642,380	+			-0.8
4,642,381	-			+0.5
4,642,381	-			-0.8
4,642,381	-			-0.1
4,642,425	+			+0.2
4,642,425	+			+0.4
4,642,425	+			-1.3
4,642,514	+	OH686_22905	0.32	-0.2
4,642,514	+	OH686_22905	0.32	+0.1
4,642,515	-	OH686_22905	0.33	+1.2
4,642,515	-	OH686_22905	0.33	-0.3
4,642,515	-	OH686_22905	0.33	-0.8
4,642,567	+	OH686_22905	0.49	+0.3
4,642,568	-	OH686_22905	0.49	+0.0
4,642,568	-	OH686_22905	0.49	+0.4
4,642,568	-	OH686_22905	0.49	+1.0
4,642,568	-	OH686_22905	0.49	-0.8
4,642,649	+	OH686_22905	0.75	-0.8
4,642,649	+	OH686_22905	0.75	-0.2
4,642,650	-	OH686_22905	0.75	-0.3
4,642,656	-	OH686_22905	0.77	-0.5
4,642,701	+			-0.7
4,642,701	+			+0.2
4,642,701	+			-0.6
4,642,701	+			-0.3
4,642,701	+			-0.7
4,642,701	+			+0.7
4,642,701	+			+0.6
4,642,701	+			-0.9
4,642,701	+			-0.6
4,642,702	-			+0.1
4,642,702	-			-2.2
4,642,724	+			-0.3
4,642,724	+			-0.5
4,642,724	+			+0.4
4,642,724	+			-0.9
4,642,725	-			-0.7
4,642,725	-			+0.4
4,642,725	-			+0.4
4,642,725	-			-2.8
4,642,725	-			-1.4
4,642,725	-			+0.6
4,642,725	-			-0.1
4,642,730	+			-1.4
4,642,730	+			+0.5
4,642,730	+			-1.3
4,642,730	+			+0.5
4,642,730	+			+0.2
4,642,730	+			-0.5
4,642,730	+			-0.4
4,642,730	+			-0.3
4,642,730	+			+0.6
4,642,730	+			-0.1
4,642,730	+			-0.9
4,642,730	+			-1.3
4,642,731	-			-1.5
4,642,731	-			-0.2
4,642,731	-			+0.1
4,642,731	-			+0.0
4,642,731	-			+1.2
4,642,731	-			-0.7
4,642,731	-			-0.3
4,642,731	-			+0.6
4,642,731	-			-0.3
4,642,731	-			+1.8
4,642,757	+	OH686_22910	0.13	+0.1
4,642,903	+	OH686_22910	0.81	-0.3
4,642,903	+	OH686_22910	0.81	+0.4
4,642,904	-	OH686_22910	0.81	+1.0
4,642,904	-	OH686_22910	0.81	-0.1
4,642,904	-	OH686_22910	0.81	+0.6
4,642,904	-	OH686_22910	0.81	-1.0
4,642,911	+	OH686_22910	0.84	-1.0
4,642,911	+	OH686_22910	0.84	+0.2
4,642,911	+	OH686_22910	0.84	-0.2
4,642,912	-	OH686_22910	0.85	-0.1
4,642,912	-	OH686_22910	0.85	-0.2
4,642,912	-	OH686_22910	0.85	+0.5
4,642,915	+	OH686_22910	0.86	-0.7
4,642,915	+	OH686_22910	0.86	+0.7
4,642,915	+	OH686_22910	0.86	-0.5
4,642,915	+	OH686_22910	0.86	+0.7
4,642,915	+	OH686_22910	0.86	-1.8
4,642,915	+	OH686_22910	0.86	-0.2
4,642,915	+	OH686_22910	0.86	-1.0
4,642,915	+	OH686_22910	0.86	-0.1
4,642,915	+	OH686_22910	0.86	-0.3
4,642,915	+	OH686_22910	0.86	+1.5
4,642,915	+	OH686_22910	0.86	+0.0
4,642,915	+	OH686_22910	0.86	+1.5
4,642,915	+	OH686_22910	0.86	-1.0
4,642,915	+	OH686_22910	0.86	+0.2
4,642,915	+	OH686_22910	0.86	+0.4
4,642,915	+	OH686_22910	0.86	+1.7
4,642,915	+	OH686_22910	0.86	-0.1
4,642,915	+	OH686_22910	0.86	-0.0
4,642,915	+	OH686_22910	0.86	+1.6
4,642,916	-	OH686_22910	0.87	+0.2
4,642,916	-	OH686_22910	0.87	+0.8
4,642,916	-	OH686_22910	0.87	-0.4
4,642,916	-	OH686_22910	0.87	-0.3
4,642,916	-	OH686_22910	0.87	-0.1
4,642,916	-	OH686_22910	0.87	+0.1
4,642,916	-	OH686_22910	0.87	-0.0
4,642,916	-	OH686_22910	0.87	-1.2
4,642,916	-	OH686_22910	0.87	-1.1
4,642,916	-	OH686_22910	0.87	-1.0
4,642,916	-	OH686_22910	0.87	+0.4
4,642,916	-	OH686_22910	0.87	+0.2
4,642,916	-	OH686_22910	0.87	-0.1
4,642,916	-	OH686_22910	0.87	+1.1
4,642,916	-	OH686_22910	0.87	+0.6
4,642,916	-	OH686_22910	0.87	-0.5
4,642,916	-	OH686_22910	0.87	-0.4
4,642,916	-	OH686_22910	0.87	+0.1
4,642,916	-	OH686_22910	0.87	+0.1
4,642,916	-	OH686_22910	0.87	+0.6
4,642,916	-	OH686_22910	0.87	-0.6
4,642,916	-	OH686_22910	0.87	+2.4
4,642,922	+	OH686_22910	0.89	-0.2
4,642,922	+	OH686_22910	0.89	-0.0
4,642,922	+	OH686_22910	0.89	-0.8
4,642,922	+	OH686_22910	0.89	-1.4
4,642,922	+	OH686_22910	0.89	-2.1
4,642,922	+	OH686_22910	0.89	-0.5
4,642,923	-			-0.2
4,642,923	-			-0.2
4,642,923	-			+1.3
4,642,944	+			-1.0
4,642,998	+			-1.0
4,643,053	+	OH686_22915	0.11	-0.9
4,643,053	+	OH686_22915	0.11	+0.3
4,643,068	+	OH686_22915	0.12	-0.6
4,643,068	+	OH686_22915	0.12	+0.1
4,643,068	+	OH686_22915	0.12	+0.9
4,643,068	+	OH686_22915	0.12	+0.2
4,643,068	+	OH686_22915	0.12	+1.0
4,643,068	+	OH686_22915	0.12	-0.1
4,643,068	+	OH686_22915	0.12	-0.1
4,643,068	+	OH686_22915	0.12	-1.4
4,643,068	+	OH686_22915	0.12	-1.4
4,643,068	+	OH686_22915	0.12	-0.7
4,643,069	-	OH686_22915	0.13	-0.2
4,643,069	-	OH686_22915	0.13	-1.3
4,643,069	-	OH686_22915	0.13	+0.3
4,643,069	-	OH686_22915	0.13	-1.8
4,643,069	-	OH686_22915	0.13	+0.2
4,643,069	-	OH686_22915	0.13	-0.4
4,643,069	-	OH686_22915	0.13	+0.0
4,643,069	-	OH686_22915	0.13	-0.1
4,643,069	-	OH686_22915	0.13	-2.3
4,643,069	-	OH686_22915	0.13	+0.1
4,643,069	-	OH686_22915	0.13	+0.3
4,643,069	-	OH686_22915	0.13	-1.0
4,643,069	-	OH686_22915	0.13	+0.1
4,643,069	-	OH686_22915	0.13	-0.6
4,643,069	-	OH686_22915	0.13	-1.9
4,643,069	-	OH686_22915	0.13	-1.6
4,643,069	-	OH686_22915	0.13	-0.1
4,643,069	-	OH686_22915	0.13	+0.7
4,643,100	+	OH686_22915	0.16	-0.0
4,643,100	+	OH686_22915	0.16	+0.6
4,643,100	+	OH686_22915	0.16	-0.3
4,643,100	+	OH686_22915	0.16	+1.4
4,643,100	+	OH686_22915	0.16	+0.8
4,643,101	-	OH686_22915	0.16	-0.6
4,643,101	-	OH686_22915	0.16	+0.8
4,643,101	-	OH686_22915	0.16	-0.8
4,643,101	-	OH686_22915	0.16	-0.4
4,643,123	-	OH686_22915	0.19	+0.3
4,643,207	+	OH686_22915	0.28	+0.2
4,643,208	-	OH686_22915	0.28	-0.6
4,643,208	-	OH686_22915	0.28	+0.2
4,643,211	+	OH686_22915	0.29	-0.2
4,643,211	+	OH686_22915	0.29	-0.6
4,643,211	+	OH686_22915	0.29	-0.4
4,643,211	+	OH686_22915	0.29	-1.5
4,643,211	+	OH686_22915	0.29	-0.4
4,643,212	-	OH686_22915	0.29	-1.6
4,643,212	-	OH686_22915	0.29	-0.7
4,643,212	-	OH686_22915	0.29	+0.8
4,643,212	-	OH686_22915	0.29	-0.3
4,643,212	-	OH686_22915	0.29	-1.0
4,643,243	+	OH686_22915	0.32	-1.6
4,643,243	+	OH686_22915	0.32	-0.9
4,643,243	+	OH686_22915	0.32	-0.7
4,643,243	+	OH686_22915	0.32	+0.5
4,643,243	+	OH686_22915	0.32	-0.5
4,643,243	+	OH686_22915	0.32	+0.6
4,643,243	+	OH686_22915	0.32	+0.2
4,643,244	-	OH686_22915	0.33	+0.1
4,643,244	-	OH686_22915	0.33	-0.5
4,643,244	-	OH686_22915	0.33	+0.2
4,643,244	-	OH686_22915	0.33	-0.1
4,643,244	-	OH686_22915	0.33	+1.3
4,643,308	+	OH686_22915	0.40	-0.7
4,643,308	+	OH686_22915	0.40	-1.1
4,643,309	-	OH686_22915	0.40	+0.1
4,643,309	-	OH686_22915	0.40	-0.1
4,643,309	-	OH686_22915	0.40	+0.9
4,643,338	+	OH686_22915	0.43	-0.5
4,643,338	+	OH686_22915	0.43	+0.4
4,643,338	+	OH686_22915	0.43	-0.3
4,643,339	-	OH686_22915	0.43	+0.0
4,643,339	-	OH686_22915	0.43	-0.3
4,643,339	-	OH686_22915	0.43	+0.7
4,643,339	-	OH686_22915	0.43	-0.3
4,643,339	-	OH686_22915	0.43	-2.6
4,643,339	-	OH686_22915	0.43	-0.3
4,643,339	-	OH686_22915	0.43	-0.4
4,643,339	-	OH686_22915	0.43	+0.4
4,643,348	+	OH686_22915	0.44	-2.2
4,643,348	+	OH686_22915	0.44	-0.1
4,643,348	+	OH686_22915	0.44	+0.3
4,643,348	+	OH686_22915	0.44	-0.1
4,643,348	+	OH686_22915	0.44	+0.4
4,643,348	+	OH686_22915	0.44	+0.2
4,643,348	+	OH686_22915	0.44	-0.0
4,643,349	-	OH686_22915	0.45	-0.7
4,643,349	-	OH686_22915	0.45	+1.0
4,643,349	-	OH686_22915	0.45	+1.6
4,643,349	-	OH686_22915	0.45	+0.4
4,643,349	-	OH686_22915	0.45	+1.0
4,643,398	+	OH686_22915	0.50	+0.3
4,643,398	+	OH686_22915	0.50	+0.7
4,643,398	+	OH686_22915	0.50	+0.7
4,643,398	+	OH686_22915	0.50	-0.7
4,643,398	+	OH686_22915	0.50	+0.0
4,643,398	+	OH686_22915	0.50	+0.1
4,643,398	+	OH686_22915	0.50	-0.2
4,643,398	+	OH686_22915	0.50	+0.0
4,643,399	-	OH686_22915	0.50	+1.1
4,643,399	-	OH686_22915	0.50	-0.3
4,643,399	-	OH686_22915	0.50	-1.4
4,643,399	-	OH686_22915	0.50	+0.2
4,643,399	-	OH686_22915	0.50	-0.3
4,643,399	-	OH686_22915	0.50	-0.8
4,643,399	-	OH686_22915	0.50	-0.2
4,643,399	-	OH686_22915	0.50	-0.4
4,643,399	-	OH686_22915	0.50	+0.4
4,643,399	-	OH686_22915	0.50	+0.2
4,643,399	-	OH686_22915	0.50	-0.8
4,643,399	-	OH686_22915	0.50	+1.0
4,643,440	-	OH686_22915	0.55	-0.4
4,643,487	+	OH686_22915	0.60	-0.2
4,643,487	+	OH686_22915	0.60	+1.0
4,643,488	-	OH686_22915	0.60	+0.0
4,643,488	-	OH686_22915	0.60	-0.2
4,643,488	-	OH686_22915	0.60	-0.1
4,643,488	-	OH686_22915	0.60	+0.2
4,643,488	-	OH686_22915	0.60	-0.4
4,643,488	-	OH686_22915	0.60	-0.2
4,643,488	-	OH686_22915	0.60	-0.0
4,643,503	+	OH686_22915	0.62	-0.9
4,643,503	+	OH686_22915	0.62	-0.8
4,643,503	+	OH686_22915	0.62	-0.0
4,643,566	+	OH686_22915	0.69	-0.5
4,643,566	+	OH686_22915	0.69	-0.1
4,643,566	+	OH686_22915	0.69	-1.0
4,643,620	+	OH686_22915	0.75	-0.5
4,643,620	+	OH686_22915	0.75	-0.7
4,643,620	+	OH686_22915	0.75	-0.0
4,643,620	+	OH686_22915	0.75	-0.6
4,643,620	+	OH686_22915	0.75	+0.5
4,643,620	+	OH686_22915	0.75	+1.7
4,643,621	-	OH686_22915	0.76	+0.2
4,643,621	-	OH686_22915	0.76	-0.4
4,643,621	-	OH686_22915	0.76	-1.3
4,643,621	-	OH686_22915	0.76	-2.0
4,643,621	-	OH686_22915	0.76	-1.0
4,643,642	-	OH686_22915	0.78	-0.8
4,643,642	-	OH686_22915	0.78	-0.5
4,643,654	+	OH686_22915	0.79	+0.6
4,643,655	-	OH686_22915	0.79	-0.5
4,643,663	-	OH686_22915	0.80	-0.3
4,643,674	+	OH686_22915	0.82	-0.5
4,643,674	+	OH686_22915	0.82	+0.8
4,643,674	+	OH686_22915	0.82	+0.4
4,643,674	+	OH686_22915	0.82	+1.3
4,643,675	-	OH686_22915	0.82	-0.3
4,643,675	-	OH686_22915	0.82	+0.1
4,643,675	-	OH686_22915	0.82	-0.2

Or see this region's nucleotide sequence