Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_20440 and OH686_20445 are separated by 15 nucleotides OH686_20445 and OH686_20450 are separated by 32 nucleotides OH686_20450 and OH686_20455 are separated by 4 nucleotides OH686_20455 and OH686_20460 are separated by 54 nucleotides
OH686_20440: OH686_20440 - Membrane carboxypeptidase (penicillin-binding protein), at 4,174,058 to 4,177,174
_20440
OH686_20445: OH686_20445 - CDS, at 4,177,190 to 4,177,333
_20445
OH686_20450: OH686_20450 - hypothetical protein, at 4,177,366 to 4,177,776
_20450
OH686_20455: OH686_20455 - hypothetical protein, at 4,177,781 to 4,178,521
_20455
OH686_20460: OH686_20460 - Ferredoxin-dependent glutamate synthase , at 4,178,576 to 4,180,192
_20460
Position (kb) 4177
4178
4179 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4176.787 kb on - strand, within OH686_20440 at 4176.787 kb on - strand, within OH686_20440 at 4176.948 kb on + strand at 4176.949 kb on - strand at 4176.993 kb on + strand at 4176.994 kb on - strand at 4176.994 kb on - strand at 4177.107 kb on + strand at 4177.107 kb on + strand at 4177.107 kb on + strand at 4177.107 kb on + strand at 4177.108 kb on - strand at 4177.108 kb on - strand at 4177.108 kb on - strand at 4177.108 kb on - strand at 4177.108 kb on - strand at 4177.212 kb on + strand, within OH686_20445 at 4177.212 kb on + strand, within OH686_20445 at 4177.212 kb on + strand, within OH686_20445 at 4177.212 kb on + strand, within OH686_20445 at 4177.212 kb on + strand, within OH686_20445 at 4177.213 kb on - strand, within OH686_20445 at 4177.213 kb on - strand, within OH686_20445 at 4177.213 kb on - strand, within OH686_20445 at 4177.213 kb on - strand, within OH686_20445 at 4177.213 kb on - strand, within OH686_20445 at 4177.242 kb on + strand, within OH686_20445 at 4177.243 kb on - strand, within OH686_20445 at 4177.403 kb on - strand at 4177.555 kb on + strand, within OH686_20450 at 4177.556 kb on - strand, within OH686_20450 at 4177.609 kb on + strand, within OH686_20450 at 4177.609 kb on + strand, within OH686_20450 at 4177.609 kb on + strand, within OH686_20450 at 4177.609 kb on + strand, within OH686_20450 at 4177.609 kb on + strand, within OH686_20450 at 4177.609 kb on + strand, within OH686_20450 at 4177.609 kb on + strand, within OH686_20450 at 4177.609 kb on + strand, within OH686_20450 at 4177.610 kb on - strand, within OH686_20450 at 4177.610 kb on - strand, within OH686_20450 at 4177.610 kb on - strand, within OH686_20450 at 4177.610 kb on - strand, within OH686_20450 at 4177.610 kb on - strand, within OH686_20450 at 4177.610 kb on - strand, within OH686_20450 at 4177.610 kb on - strand, within OH686_20450 at 4177.610 kb on - strand, within OH686_20450 at 4177.610 kb on - strand, within OH686_20450 at 4177.639 kb on + strand, within OH686_20450 at 4177.756 kb on + strand at 4177.756 kb on + strand at 4177.757 kb on - strand at 4177.757 kb on - strand at 4177.757 kb on - strand at 4177.757 kb on - strand at 4177.774 kb on + strand at 4177.774 kb on + strand at 4177.775 kb on - strand at 4177.775 kb on - strand at 4177.775 kb on - strand at 4177.775 kb on - strand at 4177.891 kb on + strand, within OH686_20455 at 4177.891 kb on + strand, within OH686_20455 at 4177.932 kb on + strand, within OH686_20455 at 4177.932 kb on + strand, within OH686_20455 at 4177.932 kb on + strand, within OH686_20455 at 4177.932 kb on + strand, within OH686_20455 at 4177.933 kb on - strand, within OH686_20455 at 4177.933 kb on - strand, within OH686_20455 at 4177.933 kb on - strand, within OH686_20455 at 4177.983 kb on + strand, within OH686_20455 at 4178.079 kb on + strand, within OH686_20455 at 4178.080 kb on - strand, within OH686_20455 at 4178.080 kb on - strand, within OH686_20455 at 4178.145 kb on + strand, within OH686_20455 at 4178.145 kb on + strand, within OH686_20455 at 4178.146 kb on - strand, within OH686_20455 at 4178.196 kb on + strand, within OH686_20455 at 4178.196 kb on + strand, within OH686_20455 at 4178.196 kb on + strand, within OH686_20455 at 4178.196 kb on + strand, within OH686_20455 at 4178.216 kb on + strand, within OH686_20455 at 4178.216 kb on + strand, within OH686_20455 at 4178.216 kb on + strand, within OH686_20455 at 4178.216 kb on + strand, within OH686_20455 at 4178.217 kb on - strand, within OH686_20455 at 4178.217 kb on - strand, within OH686_20455 at 4178.302 kb on - strand, within OH686_20455 at 4178.383 kb on + strand, within OH686_20455 at 4178.487 kb on + strand at 4178.487 kb on + strand at 4178.487 kb on + strand at 4178.488 kb on - strand at 4178.488 kb on - strand at 4178.509 kb on - strand at 4178.558 kb on + strand at 4178.558 kb on + strand at 4178.558 kb on + strand at 4178.558 kb on + strand at 4178.558 kb on + strand at 4178.558 kb on + strand at 4178.559 kb on - strand at 4178.559 kb on - strand at 4178.559 kb on - strand at 4178.559 kb on - strand at 4178.559 kb on - strand at 4178.559 kb on - strand at 4178.559 kb on - strand at 4178.559 kb on - strand at 4178.559 kb on - strand at 4178.559 kb on - strand at 4178.559 kb on - strand at 4178.559 kb on - strand at 4178.578 kb on - strand at 4178.578 kb on - strand at 4178.635 kb on - strand at 4178.635 kb on - strand at 4178.700 kb on + strand at 4178.701 kb on - strand at 4178.701 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 4,176,787 - OH686_20440 0.88 +1.2 4,176,787 - OH686_20440 0.88 +0.1 4,176,948 + +0.8 4,176,949 - -1.2 4,176,993 + +1.0 4,176,994 - +1.2 4,176,994 - +0.5 4,177,107 + -2.9 4,177,107 + +1.4 4,177,107 + -0.7 4,177,107 + +1.3 4,177,108 - -1.2 4,177,108 - -0.0 4,177,108 - -1.9 4,177,108 - -0.2 4,177,108 - -1.0 4,177,212 + OH686_20445 0.15 -0.4 4,177,212 + OH686_20445 0.15 +0.1 4,177,212 + OH686_20445 0.15 -0.7 4,177,212 + OH686_20445 0.15 +0.4 4,177,212 + OH686_20445 0.15 +0.3 4,177,213 - OH686_20445 0.16 +0.5 4,177,213 - OH686_20445 0.16 -0.4 4,177,213 - OH686_20445 0.16 -0.8 4,177,213 - OH686_20445 0.16 +0.4 4,177,213 - OH686_20445 0.16 -0.1 4,177,242 + OH686_20445 0.36 -0.0 4,177,243 - OH686_20445 0.37 -1.1 4,177,403 - +0.3 4,177,555 + OH686_20450 0.46 +0.4 4,177,556 - OH686_20450 0.46 -0.2 4,177,609 + OH686_20450 0.59 +0.3 4,177,609 + OH686_20450 0.59 -0.0 4,177,609 + OH686_20450 0.59 -0.9 4,177,609 + OH686_20450 0.59 +0.7 4,177,609 + OH686_20450 0.59 -0.2 4,177,609 + OH686_20450 0.59 +0.7 4,177,609 + OH686_20450 0.59 -0.3 4,177,609 + OH686_20450 0.59 -0.3 4,177,610 - OH686_20450 0.59 -0.2 4,177,610 - OH686_20450 0.59 -0.3 4,177,610 - OH686_20450 0.59 -0.1 4,177,610 - OH686_20450 0.59 -0.6 4,177,610 - OH686_20450 0.59 +1.8 4,177,610 - OH686_20450 0.59 +0.4 4,177,610 - OH686_20450 0.59 -0.1 4,177,610 - OH686_20450 0.59 +0.5 4,177,610 - OH686_20450 0.59 -0.2 4,177,639 + OH686_20450 0.66 -1.6 4,177,756 + +0.4 4,177,756 + +0.5 4,177,757 - +1.5 4,177,757 - -0.5 4,177,757 - +0.7 4,177,757 - -0.1 4,177,774 + -0.2 4,177,774 + -0.1 4,177,775 - +0.2 4,177,775 - +1.1 4,177,775 - +0.3 4,177,775 - +0.5 4,177,891 + OH686_20455 0.15 -0.6 4,177,891 + OH686_20455 0.15 -2.4 4,177,932 + OH686_20455 0.20 +0.3 4,177,932 + OH686_20455 0.20 -0.3 4,177,932 + OH686_20455 0.20 -0.0 4,177,932 + OH686_20455 0.20 +0.8 4,177,933 - OH686_20455 0.21 +0.4 4,177,933 - OH686_20455 0.21 -1.3 4,177,933 - OH686_20455 0.21 -0.2 4,177,983 + OH686_20455 0.27 +1.0 4,178,079 + OH686_20455 0.40 -1.0 4,178,080 - OH686_20455 0.40 +0.2 4,178,080 - OH686_20455 0.40 +0.6 4,178,145 + OH686_20455 0.49 +0.9 4,178,145 + OH686_20455 0.49 +0.2 4,178,146 - OH686_20455 0.49 +0.8 4,178,196 + OH686_20455 0.56 -0.1 4,178,196 + OH686_20455 0.56 -0.1 4,178,196 + OH686_20455 0.56 -0.5 4,178,196 + OH686_20455 0.56 +0.5 4,178,216 + OH686_20455 0.59 -0.6 4,178,216 + OH686_20455 0.59 -0.2 4,178,216 + OH686_20455 0.59 -0.8 4,178,216 + OH686_20455 0.59 +0.2 4,178,217 - OH686_20455 0.59 +0.5 4,178,217 - OH686_20455 0.59 +0.8 4,178,302 - OH686_20455 0.70 +0.3 4,178,383 + OH686_20455 0.81 -0.3 4,178,487 + -0.9 4,178,487 + +1.6 4,178,487 + -1.9 4,178,488 - -0.0 4,178,488 - +0.3 4,178,509 - -0.3 4,178,558 + +0.9 4,178,558 + +0.3 4,178,558 + +0.8 4,178,558 + -0.2 4,178,558 + +0.1 4,178,558 + +1.1 4,178,559 - +0.1 4,178,559 - +1.2 4,178,559 - -0.2 4,178,559 - -1.2 4,178,559 - +0.0 4,178,559 - +1.4 4,178,559 - -0.6 4,178,559 - +0.8 4,178,559 - -0.8 4,178,559 - +1.1 4,178,559 - +1.7 4,178,559 - -1.2 4,178,578 - -1.9 4,178,578 - +0.0 4,178,635 - +0.3 4,178,635 - +1.3 4,178,700 + -0.3 4,178,701 - +0.2 4,178,701 - -1.3
Or see this region's nucleotide sequence