Strain Fitness in Pseudomonas sp. S08-1 around OH686_01910

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOH686_01905 and OH686_01910 are separated by 8 nucleotidesOH686_01910 and OH686_01915 are separated by 244 nucleotides OH686_01905: OH686_01905 - K+-transporting ATPase, A subunit, at 407,797 to 409,485 _01905 OH686_01910: OH686_01910 - CDS, at 409,494 to 409,583 _01910 OH686_01915: OH686_01915 - GTP-binding protein, at 409,828 to 411,417 _01915 Position (kb) 409 410Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 408.566 kb on + strand, within OH686_01905at 408.567 kb on - strand, within OH686_01905at 408.567 kb on - strand, within OH686_01905at 408.656 kb on + strand, within OH686_01905at 408.656 kb on + strand, within OH686_01905at 408.656 kb on + strand, within OH686_01905at 408.656 kb on + strand, within OH686_01905at 408.656 kb on + strand, within OH686_01905at 408.656 kb on + strand, within OH686_01905at 408.656 kb on + strand, within OH686_01905at 408.656 kb on + strand, within OH686_01905at 408.657 kb on - strand, within OH686_01905at 408.657 kb on - strand, within OH686_01905at 408.657 kb on - strand, within OH686_01905at 408.657 kb on - strand, within OH686_01905at 408.872 kb on + strand, within OH686_01905at 408.872 kb on + strand, within OH686_01905at 408.872 kb on + strand, within OH686_01905at 408.873 kb on - strand, within OH686_01905at 408.873 kb on - strand, within OH686_01905at 408.873 kb on - strand, within OH686_01905at 408.873 kb on - strand, within OH686_01905at 408.873 kb on - strand, within OH686_01905at 408.947 kb on + strand, within OH686_01905at 408.947 kb on + strand, within OH686_01905at 408.948 kb on - strand, within OH686_01905at 408.948 kb on - strand, within OH686_01905at 408.981 kb on + strand, within OH686_01905at 408.982 kb on - strand, within OH686_01905at 408.982 kb on - strand, within OH686_01905at 409.064 kb on + strand, within OH686_01905at 409.064 kb on + strand, within OH686_01905at 409.064 kb on + strand, within OH686_01905at 409.064 kb on + strand, within OH686_01905at 409.064 kb on + strand, within OH686_01905at 409.064 kb on + strand, within OH686_01905at 409.064 kb on + strand, within OH686_01905at 409.065 kb on - strand, within OH686_01905at 409.065 kb on - strand, within OH686_01905at 409.065 kb on - strand, within OH686_01905at 409.065 kb on - strand, within OH686_01905at 409.065 kb on - strand, within OH686_01905at 409.065 kb on - strand, within OH686_01905at 409.065 kb on - strand, within OH686_01905at 409.065 kb on - strand, within OH686_01905at 409.065 kb on - strand, within OH686_01905at 409.097 kb on + strand, within OH686_01905at 409.097 kb on + strand, within OH686_01905at 409.097 kb on + strand, within OH686_01905at 409.097 kb on + strand, within OH686_01905at 409.098 kb on - strand, within OH686_01905at 409.098 kb on - strand, within OH686_01905at 409.098 kb on - strand, within OH686_01905at 409.121 kb on + strand, within OH686_01905at 409.121 kb on + strand, within OH686_01905at 409.122 kb on - strand, within OH686_01905at 409.122 kb on - strand, within OH686_01905at 409.122 kb on - strand, within OH686_01905at 409.122 kb on - strand, within OH686_01905at 409.164 kb on + strand, within OH686_01905at 409.165 kb on - strand, within OH686_01905at 409.165 kb on - strand, within OH686_01905at 409.244 kb on - strand, within OH686_01905at 409.289 kb on + strand, within OH686_01905at 409.289 kb on + strand, within OH686_01905at 409.289 kb on + strand, within OH686_01905at 409.289 kb on + strand, within OH686_01905at 409.289 kb on + strand, within OH686_01905at 409.289 kb on + strand, within OH686_01905at 409.289 kb on + strand, within OH686_01905at 409.289 kb on + strand, within OH686_01905at 409.289 kb on + strand, within OH686_01905at 409.289 kb on + strand, within OH686_01905at 409.289 kb on + strand, within OH686_01905at 409.290 kb on - strand, within OH686_01905at 409.290 kb on - strand, within OH686_01905at 409.290 kb on - strand, within OH686_01905at 409.290 kb on - strand, within OH686_01905at 409.290 kb on - strand, within OH686_01905at 409.290 kb on - strand, within OH686_01905at 409.290 kb on - strand, within OH686_01905at 409.337 kb on + strandat 409.337 kb on + strandat 409.337 kb on + strandat 409.337 kb on + strandat 409.337 kb on + strandat 409.337 kb on + strandat 409.337 kb on + strandat 409.338 kb on - strandat 409.338 kb on - strandat 409.363 kb on + strandat 409.363 kb on + strandat 409.363 kb on + strandat 409.363 kb on + strandat 409.364 kb on - strandat 409.364 kb on - strandat 409.403 kb on + strandat 409.403 kb on + strandat 409.404 kb on - strandat 409.409 kb on + strandat 409.410 kb on - strandat 409.410 kb on - strandat 409.469 kb on + strandat 409.469 kb on + strandat 409.469 kb on + strandat 409.470 kb on - strandat 409.495 kb on + strandat 409.513 kb on - strand, within OH686_01910at 409.531 kb on + strand, within OH686_01910at 409.531 kb on + strand, within OH686_01910at 409.531 kb on + strand, within OH686_01910at 409.531 kb on + strand, within OH686_01910at 409.531 kb on + strand, within OH686_01910at 409.531 kb on + strand, within OH686_01910at 409.531 kb on + strand, within OH686_01910at 409.531 kb on + strand, within OH686_01910at 409.531 kb on + strand, within OH686_01910at 409.532 kb on - strand, within OH686_01910at 409.532 kb on - strand, within OH686_01910at 409.532 kb on - strand, within OH686_01910at 409.532 kb on - strand, within OH686_01910at 409.532 kb on - strand, within OH686_01910at 409.532 kb on - strand, within OH686_01910at 409.532 kb on - strand, within OH686_01910at 409.532 kb on - strand, within OH686_01910at 409.532 kb on - strand, within OH686_01910at 409.532 kb on - strand, within OH686_01910at 409.532 kb on - strand, within OH686_01910at 409.532 kb on - strand, within OH686_01910at 409.532 kb on - strand, within OH686_01910at 409.607 kb on - strandat 409.607 kb on - strandat 409.643 kb on - strandat 409.686 kb on + strandat 409.686 kb on + strandat 409.687 kb on - strandat 409.829 kb on + strandat 409.829 kb on + strandat 410.012 kb on + strand, within OH686_01915at 410.013 kb on - strand, within OH686_01915at 410.013 kb on - strand, within OH686_01915at 410.013 kb on - strand, within OH686_01915at 410.471 kb on + strand, within OH686_01915at 410.471 kb on + strand, within OH686_01915at 410.471 kb on + strand, within OH686_01915at 410.472 kb on - strand, within OH686_01915at 410.472 kb on - strand, within OH686_01915at 410.472 kb on - strand, within OH686_01915at 410.472 kb on - strand, within OH686_01915at 410.472 kb on - strand, within OH686_01915at 410.558 kb on + strand, within OH686_01915at 410.558 kb on + strand, within OH686_01915at 410.558 kb on + strand, within OH686_01915at 410.558 kb on + strand, within OH686_01915at 410.558 kb on + strand, within OH686_01915at 410.579 kb on + strand, within OH686_01915at 410.579 kb on + strand, within OH686_01915at 410.579 kb on + strand, within OH686_01915at 410.579 kb on + strand, within OH686_01915at 410.579 kb on + strand, within OH686_01915at 410.579 kb on + strand, within OH686_01915at 410.579 kb on + strand, within OH686_01915at 410.579 kb on + strand, within OH686_01915at 410.579 kb on + strand, within OH686_01915at 410.579 kb on + strand, within OH686_01915at 410.580 kb on - strand, within OH686_01915at 410.580 kb on - strand, within OH686_01915at 410.580 kb on - strand, within OH686_01915at 410.580 kb on - strand, within OH686_01915at 410.580 kb on - strand, within OH686_01915at 410.580 kb on - strand, within OH686_01915at 410.580 kb on - strand, within OH686_01915at 410.580 kb on - strand, within OH686_01915at 410.580 kb on - strand, within OH686_01915at 410.580 kb on - strand, within OH686_01915

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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408,566 + OH686_01905 0.46 +0.3
408,567 - OH686_01905 0.46 +0.7
408,567 - OH686_01905 0.46 +0.1
408,656 + OH686_01905 0.51 +1.2
408,656 + OH686_01905 0.51 -0.5
408,656 + OH686_01905 0.51 -2.5
408,656 + OH686_01905 0.51 -0.4
408,656 + OH686_01905 0.51 -0.7
408,656 + OH686_01905 0.51 -1.0
408,656 + OH686_01905 0.51 -0.8
408,656 + OH686_01905 0.51 -0.3
408,657 - OH686_01905 0.51 +0.2
408,657 - OH686_01905 0.51 -0.4
408,657 - OH686_01905 0.51 +0.2
408,657 - OH686_01905 0.51 +0.4
408,872 + OH686_01905 0.64 -2.3
408,872 + OH686_01905 0.64 +0.1
408,872 + OH686_01905 0.64 +0.1
408,873 - OH686_01905 0.64 +0.1
408,873 - OH686_01905 0.64 -0.6
408,873 - OH686_01905 0.64 +0.7
408,873 - OH686_01905 0.64 +0.6
408,873 - OH686_01905 0.64 -0.0
408,947 + OH686_01905 0.68 +0.3
408,947 + OH686_01905 0.68 +0.3
408,948 - OH686_01905 0.68 +0.6
408,948 - OH686_01905 0.68 +0.3
408,981 + OH686_01905 0.70 -0.2
408,982 - OH686_01905 0.70 +0.5
408,982 - OH686_01905 0.70 +0.7
409,064 + OH686_01905 0.75 +0.5
409,064 + OH686_01905 0.75 -0.8
409,064 + OH686_01905 0.75 -0.0
409,064 + OH686_01905 0.75 -0.9
409,064 + OH686_01905 0.75 +0.4
409,064 + OH686_01905 0.75 +0.2
409,064 + OH686_01905 0.75 +0.1
409,065 - OH686_01905 0.75 -1.0
409,065 - OH686_01905 0.75 -0.3
409,065 - OH686_01905 0.75 -0.2
409,065 - OH686_01905 0.75 -0.1
409,065 - OH686_01905 0.75 -0.6
409,065 - OH686_01905 0.75 +0.1
409,065 - OH686_01905 0.75 +1.3
409,065 - OH686_01905 0.75 +0.7
409,065 - OH686_01905 0.75 -0.4
409,097 + OH686_01905 0.77 +0.5
409,097 + OH686_01905 0.77 +1.5
409,097 + OH686_01905 0.77 +0.5
409,097 + OH686_01905 0.77 -0.1
409,098 - OH686_01905 0.77 -0.1
409,098 - OH686_01905 0.77 +0.1
409,098 - OH686_01905 0.77 -1.0
409,121 + OH686_01905 0.78 -1.3
409,121 + OH686_01905 0.78 +0.5
409,122 - OH686_01905 0.78 -1.9
409,122 - OH686_01905 0.78 +0.4
409,122 - OH686_01905 0.78 +0.8
409,122 - OH686_01905 0.78 -0.1
409,164 + OH686_01905 0.81 -1.4
409,165 - OH686_01905 0.81 +1.5
409,165 - OH686_01905 0.81 +1.6
409,244 - OH686_01905 0.86 -0.6
409,289 + OH686_01905 0.88 +0.1
409,289 + OH686_01905 0.88 -1.9
409,289 + OH686_01905 0.88 +0.8
409,289 + OH686_01905 0.88 -0.8
409,289 + OH686_01905 0.88 -0.3
409,289 + OH686_01905 0.88 +0.7
409,289 + OH686_01905 0.88 +0.5
409,289 + OH686_01905 0.88 +0.2
409,289 + OH686_01905 0.88 +0.3
409,289 + OH686_01905 0.88 +2.7
409,289 + OH686_01905 0.88 -1.8
409,290 - OH686_01905 0.88 +0.5
409,290 - OH686_01905 0.88 +0.4
409,290 - OH686_01905 0.88 -0.8
409,290 - OH686_01905 0.88 +1.3
409,290 - OH686_01905 0.88 -0.6
409,290 - OH686_01905 0.88 +0.1
409,290 - OH686_01905 0.88 +0.8
409,337 + +1.3
409,337 + -0.8
409,337 + -0.0
409,337 + +0.7
409,337 + +0.5
409,337 + -0.1
409,337 + -1.1
409,338 - +0.3
409,338 - +0.5
409,363 + +0.4
409,363 + -0.2
409,363 + -0.5
409,363 + +0.5
409,364 - +1.5
409,364 - +0.2
409,403 + -0.2
409,403 + +0.7
409,404 - -0.0
409,409 + +1.4
409,410 - +0.0
409,410 - +0.8
409,469 + +1.8
409,469 + +0.8
409,469 + +0.2
409,470 - -0.4
409,495 + -0.5
409,513 - OH686_01910 0.21 +0.7
409,531 + OH686_01910 0.41 +0.3
409,531 + OH686_01910 0.41 +0.2
409,531 + OH686_01910 0.41 +0.8
409,531 + OH686_01910 0.41 +0.7
409,531 + OH686_01910 0.41 -1.3
409,531 + OH686_01910 0.41 -0.4
409,531 + OH686_01910 0.41 +0.5
409,531 + OH686_01910 0.41 +0.1
409,531 + OH686_01910 0.41 -1.6
409,532 - OH686_01910 0.42 +0.6
409,532 - OH686_01910 0.42 +0.5
409,532 - OH686_01910 0.42 -0.9
409,532 - OH686_01910 0.42 -1.0
409,532 - OH686_01910 0.42 -0.7
409,532 - OH686_01910 0.42 +0.1
409,532 - OH686_01910 0.42 +0.2
409,532 - OH686_01910 0.42 -0.1
409,532 - OH686_01910 0.42 +0.7
409,532 - OH686_01910 0.42 +0.9
409,532 - OH686_01910 0.42 +0.0
409,532 - OH686_01910 0.42 -1.2
409,532 - OH686_01910 0.42 +0.0
409,607 - +0.1
409,607 - +0.2
409,643 - -0.2
409,686 + +1.1
409,686 + +0.7
409,687 - -0.7
409,829 + -0.8
409,829 + -0.1
410,012 + OH686_01915 0.12 -0.6
410,013 - OH686_01915 0.12 +0.7
410,013 - OH686_01915 0.12 -0.5
410,013 - OH686_01915 0.12 +0.2
410,471 + OH686_01915 0.40 -0.1
410,471 + OH686_01915 0.40 +0.3
410,471 + OH686_01915 0.40 -0.4
410,472 - OH686_01915 0.41 -0.2
410,472 - OH686_01915 0.41 -1.0
410,472 - OH686_01915 0.41 +0.6
410,472 - OH686_01915 0.41 -2.3
410,472 - OH686_01915 0.41 -0.3
410,558 + OH686_01915 0.46 +0.8
410,558 + OH686_01915 0.46 +0.3
410,558 + OH686_01915 0.46 -0.8
410,558 + OH686_01915 0.46 +0.2
410,558 + OH686_01915 0.46 -2.8
410,579 + OH686_01915 0.47 -0.1
410,579 + OH686_01915 0.47 -1.0
410,579 + OH686_01915 0.47 +0.4
410,579 + OH686_01915 0.47 +1.3
410,579 + OH686_01915 0.47 -0.9
410,579 + OH686_01915 0.47 +1.1
410,579 + OH686_01915 0.47 -0.2
410,579 + OH686_01915 0.47 -0.1
410,579 + OH686_01915 0.47 -0.2
410,579 + OH686_01915 0.47 +0.4
410,580 - OH686_01915 0.47 +0.4
410,580 - OH686_01915 0.47 +0.8
410,580 - OH686_01915 0.47 -0.4
410,580 - OH686_01915 0.47 +1.0
410,580 - OH686_01915 0.47 -0.9
410,580 - OH686_01915 0.47 -0.5
410,580 - OH686_01915 0.47 -0.2
410,580 - OH686_01915 0.47 +0.2
410,580 - OH686_01915 0.47 -0.1
410,580 - OH686_01915 0.47 +0.2

Or see this region's nucleotide sequence