Strain Fitness in Serratia liquefaciens MT49 around IAI46_24220

Experiment: No stress control, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	No stress control, aerobic
5,162,784	+		IAI46_24210	0.84	+0.1
5,162,784	+		IAI46_24210	0.84	-0.0
5,162,784	+		IAI46_24210	0.84	-0.1
5,162,785	-		IAI46_24210	0.84	+0.5
5,162,785	-		IAI46_24210	0.84	-1.2
5,162,794	-		IAI46_24210	0.84	-0.2
5,162,794	-		IAI46_24210	0.84	-0.3
5,162,794	-		IAI46_24210	0.84	+0.1
5,162,794	-		IAI46_24210	0.84	-0.0
5,162,795	+		IAI46_24210	0.84	-0.6
5,162,796	-		IAI46_24210	0.84	-0.6
5,162,962	+				+0.4
5,162,971	+				+0.2
5,163,003	-				+0.9
5,163,112	+				+1.3
5,163,112	+				+0.5
5,163,113	-				-0.3
5,163,169	-				+0.7
5,163,174	+				+0.8
5,163,174	+				-0.3
5,163,175	-				-0.1
5,163,175	-				+0.2
5,163,178	+				-1.4
5,163,178	+				+0.8
5,163,179	-				+0.1
5,163,179	-				+1.3
5,163,179	-				+0.3
5,163,179	-				+0.3
5,163,222	+				-0.6
5,163,222	+				-0.1
5,163,222	+				+0.2
5,163,222	+				+0.4
5,163,222	+				-0.8
5,163,222	+				+0.4
5,163,222	+				+0.0
5,163,223	-				+0.5
5,163,223	-				-0.0
5,163,223	-				-1.1
5,163,223	-				+1.0
5,163,226	+				+0.8
5,163,226	+				-0.0
5,163,226	+				+0.3
5,163,227	-				+0.3
5,163,234	+				+0.4
5,163,235	-				+0.1
5,163,235	-				+0.1
5,163,325	-		IAI46_24215	0.20	+0.1
5,163,437	+		IAI46_24215	0.44	-1.3
5,163,524	+		IAI46_24215	0.63	+0.4
5,163,525	-		IAI46_24215	0.63	+0.1
5,163,525	-		IAI46_24215	0.63	+0.3
5,163,549	+		IAI46_24215	0.68	+0.7
5,163,549	+		IAI46_24215	0.68	-0.2
5,163,549	+		IAI46_24215	0.68	+0.6
5,163,549	+		IAI46_24215	0.68	+0.3
5,163,549	+		IAI46_24215	0.68	-0.3
5,163,549	+		IAI46_24215	0.68	-0.4
5,163,549	+		IAI46_24215	0.68	+0.1
5,163,550	-		IAI46_24215	0.69	+0.3
5,163,550	-		IAI46_24215	0.69	+0.5
5,163,550	-		IAI46_24215	0.69	+0.5
5,163,558	+		IAI46_24215	0.70	-0.6
5,163,578	+		IAI46_24215	0.75	+0.7
5,163,579	-		IAI46_24215	0.75	+0.3
5,163,622	+		IAI46_24215	0.84	+0.5
5,163,622	+		IAI46_24215	0.84	+0.2
5,163,622	+		IAI46_24215	0.84	+2.2
5,163,622	+		IAI46_24215	0.84	-0.7
5,163,623	-		IAI46_24215	0.84	-1.3
5,163,755	+				+0.0
5,163,756	-				-0.3
5,163,762	+				+0.8
5,163,763	-				+0.1
5,163,781	+				+0.3
5,163,781	+				+0.3
5,163,781	+				-0.4
5,163,782	-				-0.2
5,163,782	-				-0.2
5,163,918	-				+0.5
5,163,918	-				+0.1
5,163,918	-				+0.0
5,163,918	-				+0.2
5,163,971	+		IAI46_24220	0.13	+0.6
5,164,003	-		IAI46_24220	0.15	+1.2
5,164,031	+		IAI46_24220	0.17	+1.3
5,164,051	+		IAI46_24220	0.19	-0.9
5,164,051	+		IAI46_24220	0.19	+0.3
5,164,051	+		IAI46_24220	0.19	-0.9
5,164,105	+		IAI46_24220	0.23	+0.6
5,164,105	+		IAI46_24220	0.23	-0.5
5,164,170	-		IAI46_24220	0.27	-0.3
5,164,317	+		IAI46_24220	0.37	+0.3
5,164,317	+		IAI46_24220	0.37	-0.4
5,164,318	-		IAI46_24220	0.37	+0.8
5,164,466	+		IAI46_24220	0.48	-0.3
5,164,528	+		IAI46_24220	0.52	+0.8
5,164,529	-		IAI46_24220	0.52	-0.9
5,164,531	+		IAI46_24220	0.52	+0.1
5,164,532	-		IAI46_24220	0.52	+0.1
5,164,557	+		IAI46_24220	0.54	-1.7
5,164,557	+		IAI46_24220	0.54	-0.4
5,164,557	+		IAI46_24220	0.54	+0.2
5,164,557	+		IAI46_24220	0.54	+2.0
5,164,557	+		IAI46_24220	0.54	-1.7
5,164,558	-		IAI46_24220	0.54	+0.9
5,164,558	-		IAI46_24220	0.54	+0.9
5,164,656	+		IAI46_24220	0.61	-0.3
5,164,677	-		IAI46_24220	0.62	-1.3
5,164,677	-		IAI46_24220	0.62	+0.1
5,164,715	+		IAI46_24220	0.65	+0.7
5,164,746	-		IAI46_24220	0.67	+0.4
5,164,830	-		IAI46_24220	0.73	-0.0
5,164,837	+		IAI46_24220	0.73	+0.2
5,164,919	+		IAI46_24220	0.79	+0.4
5,164,919	+		IAI46_24220	0.79	+0.7
5,164,919	+		IAI46_24220	0.79	-0.2
5,164,919	+		IAI46_24220	0.79	+0.8
5,164,920	-		IAI46_24220	0.79	+0.5
5,164,920	-		IAI46_24220	0.79	-0.4
5,164,933	+		IAI46_24220	0.80	+0.9
5,164,933	+		IAI46_24220	0.80	+1.1
5,164,934	-		IAI46_24220	0.80	+0.2
5,164,934	-		IAI46_24220	0.80	+0.4
5,164,934	-		IAI46_24220	0.80	-0.1
5,165,169	+				+0.3
5,165,169	+				-0.1
5,165,170	-				-0.4
5,165,197	+				+0.0
5,165,197	+				+0.2
5,165,198	-				-0.3
5,165,201	+				-0.1
5,165,201	+				-1.7
5,165,206	+				-0.4
5,165,206	+				-0.7
5,165,206	+				+0.8
5,165,207	-				+0.4
5,165,207	-				+0.3
5,165,279	+				+0.2
5,165,280	-				-0.7
5,165,280	-				+0.4
5,165,294	+				-0.3
5,165,295	-				-1.5
5,165,297	-				+0.3
5,165,297	-				-0.1
5,165,315	+				+1.0
5,165,315	+				+1.4
5,165,315	+				-0.1
5,165,315	+				+0.6
5,165,318	+				+0.1
5,165,327	+				+0.9
5,165,328	-				+0.4
5,165,331	+				+0.1
5,165,332	-				+2.0
5,165,332	-				-0.0
5,165,342	+				+0.4
5,165,476	+		IAI46_24225	0.16	+1.2
5,165,477	-		IAI46_24225	0.16	+0.6
5,165,659	+		IAI46_24225	0.36	-1.9
5,165,660	-		IAI46_24225	0.36	+1.1
5,165,660	-		IAI46_24225	0.36	+0.4
5,165,845	+		IAI46_24225	0.56	+0.3
5,166,002	+		IAI46_24225	0.73	+0.3
5,166,002	+		IAI46_24225	0.73	+0.7
5,166,003	-		IAI46_24225	0.73	+0.1
5,166,003	-		IAI46_24225	0.73	+0.5
5,166,003	-		IAI46_24225	0.73	-0.6
5,166,135	-		IAI46_24225	0.87	+0.1
5,166,142	+		IAI46_24225	0.88	-0.2
5,166,142	+		IAI46_24225	0.88	-1.7
5,166,152	+		IAI46_24225	0.89	-1.2
5,166,152	+		IAI46_24225	0.89	+0.3
5,166,152	+		IAI46_24225	0.89	+0.6
5,166,152	+		IAI46_24225	0.89	-1.0
5,166,152	+		IAI46_24225	0.89	+0.0
5,166,152	+		IAI46_24225	0.89	-0.3
5,166,153	-		IAI46_24225	0.89	+0.0
5,166,153	-		IAI46_24225	0.89	+0.5
5,166,153	-		IAI46_24225	0.89	+1.0