Strain Fitness in Serratia liquefaciens MT49 around IAI46_23465

Experiment: No stress control, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_23460 and IAI46_23465 are separated by 97 nucleotidesIAI46_23465 and IAI46_23470 are separated by 96 nucleotidesIAI46_23470 and IAI46_23475 are separated by 131 nucleotidesIAI46_23475 and IAI46_23480 are separated by 9 nucleotides IAI46_23460: IAI46_23460 - elongation factor G, at 4,993,885 to 4,995,999 _23460 IAI46_23465: IAI46_23465 - 30S ribosomal protein S7, at 4,996,097 to 4,996,567 _23465 IAI46_23470: IAI46_23470 - 30S ribosomal protein S12, at 4,996,664 to 4,997,038 _23470 IAI46_23475: IAI46_23475 - sulfurtransferase complex subunit TusB, at 4,997,170 to 4,997,457 _23475 IAI46_23480: IAI46_23480 - sulfurtransferase complex subunit TusC, at 4,997,467 to 4,997,826 _23480 Position (kb) 4996 4997Strain fitness (log2 ratio) -1 0 1at 4996.081 kb on - strandat 4997.106 kb on - strandat 4997.106 kb on - strandat 4997.153 kb on - strandat 4997.154 kb on + strandat 4997.154 kb on + strandat 4997.469 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No stress control, aerobic
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4,996,081 - -1.1
4,997,106 - -0.1
4,997,106 - +1.4
4,997,153 - +0.5
4,997,154 + -0.8
4,997,154 + -0.2
4,997,469 - +0.7

Or see this region's nucleotide sequence