Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_22620 and IAI46_22625 overlap by 38 nucleotides IAI46_22625 and IAI46_22630 overlap by 4 nucleotides IAI46_22630 and IAI46_22635 are separated by 208 nucleotides
IAI46_22620: IAI46_22620 - HTH-type transcriptional activator AaeR, at 4,807,709 to 4,808,620
_22620
IAI46_22625: IAI46_22625 - hypothetical protein, at 4,808,583 to 4,808,960
_22625
IAI46_22630: IAI46_22630 - zinc ribbon domain-containing protein, at 4,808,957 to 4,809,244
_22630
IAI46_22635: IAI46_22635 - nucleoside hydrolase, at 4,809,453 to 4,810,397
_22635
Position (kb) 4808
4809
4810 Strain fitness (log2 ratio) -1
0
1
2 at 4807.959 kb on - strand, within IAI46_22620 at 4807.959 kb on - strand, within IAI46_22620 at 4807.972 kb on + strand, within IAI46_22620 at 4808.048 kb on - strand, within IAI46_22620 at 4808.048 kb on - strand, within IAI46_22620 at 4808.060 kb on + strand, within IAI46_22620 at 4808.220 kb on - strand, within IAI46_22620 at 4808.283 kb on - strand, within IAI46_22620 at 4808.342 kb on - strand, within IAI46_22620 at 4808.362 kb on + strand, within IAI46_22620 at 4808.420 kb on + strand, within IAI46_22620 at 4808.486 kb on + strand, within IAI46_22620 at 4808.487 kb on - strand, within IAI46_22620 at 4808.487 kb on - strand, within IAI46_22620 at 4808.511 kb on - strand, within IAI46_22620 at 4808.519 kb on + strand, within IAI46_22620 at 4808.520 kb on - strand, within IAI46_22620 at 4808.533 kb on + strand at 4808.533 kb on + strand at 4808.580 kb on - strand at 4808.613 kb on - strand at 4808.627 kb on + strand, within IAI46_22625 at 4808.628 kb on - strand, within IAI46_22625 at 4808.696 kb on - strand, within IAI46_22625 at 4808.696 kb on - strand, within IAI46_22625 at 4808.799 kb on - strand, within IAI46_22625 at 4808.799 kb on - strand, within IAI46_22625 at 4808.799 kb on - strand, within IAI46_22625 at 4809.152 kb on - strand, within IAI46_22630 at 4809.153 kb on + strand, within IAI46_22630 at 4809.161 kb on - strand, within IAI46_22630 at 4809.161 kb on - strand, within IAI46_22630 at 4809.195 kb on + strand, within IAI46_22630 at 4809.266 kb on - strand at 4809.327 kb on + strand at 4809.337 kb on + strand at 4809.345 kb on - strand at 4809.467 kb on - strand at 4809.467 kb on - strand at 4809.773 kb on + strand, within IAI46_22635 at 4809.840 kb on - strand, within IAI46_22635 at 4809.858 kb on - strand, within IAI46_22635 at 4809.986 kb on + strand, within IAI46_22635 at 4809.987 kb on - strand, within IAI46_22635 at 4810.132 kb on - strand, within IAI46_22635 at 4810.189 kb on - strand, within IAI46_22635 at 4810.232 kb on - strand, within IAI46_22635 at 4810.236 kb on - strand, within IAI46_22635
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 4,807,959 - IAI46_22620 0.27 +0.1 4,807,959 - IAI46_22620 0.27 +0.6 4,807,972 + IAI46_22620 0.29 +1.3 4,808,048 - IAI46_22620 0.37 -0.3 4,808,048 - IAI46_22620 0.37 +0.8 4,808,060 + IAI46_22620 0.38 +0.1 4,808,220 - IAI46_22620 0.56 +0.3 4,808,283 - IAI46_22620 0.63 +1.3 4,808,342 - IAI46_22620 0.69 +0.0 4,808,362 + IAI46_22620 0.72 +0.7 4,808,420 + IAI46_22620 0.78 +0.3 4,808,486 + IAI46_22620 0.85 +0.3 4,808,487 - IAI46_22620 0.85 +1.8 4,808,487 - IAI46_22620 0.85 +0.7 4,808,511 - IAI46_22620 0.88 +0.5 4,808,519 + IAI46_22620 0.89 -0.5 4,808,520 - IAI46_22620 0.89 -0.1 4,808,533 + -1.0 4,808,533 + -0.0 4,808,580 - -0.1 4,808,613 - +0.4 4,808,627 + IAI46_22625 0.12 +0.1 4,808,628 - IAI46_22625 0.12 +0.5 4,808,696 - IAI46_22625 0.30 +0.1 4,808,696 - IAI46_22625 0.30 -0.1 4,808,799 - IAI46_22625 0.57 +0.4 4,808,799 - IAI46_22625 0.57 -0.6 4,808,799 - IAI46_22625 0.57 -0.7 4,809,152 - IAI46_22630 0.68 +0.3 4,809,153 + IAI46_22630 0.68 +0.1 4,809,161 - IAI46_22630 0.71 +0.5 4,809,161 - IAI46_22630 0.71 -0.6 4,809,195 + IAI46_22630 0.83 +1.0 4,809,266 - +0.5 4,809,327 + +0.2 4,809,337 + +0.4 4,809,345 - +0.3 4,809,467 - +0.4 4,809,467 - +0.0 4,809,773 + IAI46_22635 0.34 +0.6 4,809,840 - IAI46_22635 0.41 +0.4 4,809,858 - IAI46_22635 0.43 -0.1 4,809,986 + IAI46_22635 0.56 +0.2 4,809,987 - IAI46_22635 0.57 -0.4 4,810,132 - IAI46_22635 0.72 +0.5 4,810,189 - IAI46_22635 0.78 +0.7 4,810,232 - IAI46_22635 0.82 +0.3 4,810,236 - IAI46_22635 0.83 +0.6
Or see this region's nucleotide sequence