Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_20750 and IAI46_20755 overlap by 1 nucleotides IAI46_20755 and IAI46_20760 overlap by 20 nucleotides IAI46_20760 and IAI46_20765 are separated by 322 nucleotides
IAI46_20750: IAI46_20750 - two-component system response regulator CreB, at 4,393,098 to 4,393,793
_20750
IAI46_20755: IAI46_20755 - protein YgfX, at 4,393,793 to 4,394,215
_20755
IAI46_20760: IAI46_20760 - FAD assembly factor SdhE, at 4,394,196 to 4,394,462
_20760
IAI46_20765: IAI46_20765 - tRNA-modifying protein YgfZ, at 4,394,785 to 4,395,771
_20765
Position (kb) 4394
4395 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4393.196 kb on + strand, within IAI46_20750 at 4393.196 kb on + strand, within IAI46_20750 at 4393.196 kb on + strand, within IAI46_20750 at 4393.197 kb on - strand, within IAI46_20750 at 4393.348 kb on + strand, within IAI46_20750 at 4393.349 kb on - strand, within IAI46_20750 at 4393.351 kb on + strand, within IAI46_20750 at 4393.352 kb on - strand, within IAI46_20750 at 4393.352 kb on - strand, within IAI46_20750 at 4393.394 kb on + strand, within IAI46_20750 at 4393.395 kb on - strand, within IAI46_20750 at 4393.396 kb on + strand, within IAI46_20750 at 4393.396 kb on + strand, within IAI46_20750 at 4393.440 kb on + strand, within IAI46_20750 at 4393.440 kb on + strand, within IAI46_20750 at 4393.441 kb on - strand, within IAI46_20750 at 4393.449 kb on - strand, within IAI46_20750 at 4393.449 kb on - strand, within IAI46_20750 at 4393.495 kb on + strand, within IAI46_20750 at 4393.495 kb on + strand, within IAI46_20750 at 4393.495 kb on + strand, within IAI46_20750 at 4393.496 kb on - strand, within IAI46_20750 at 4393.553 kb on + strand, within IAI46_20750 at 4393.736 kb on - strand at 4393.736 kb on - strand at 4393.824 kb on + strand at 4393.824 kb on + strand at 4393.824 kb on + strand at 4393.825 kb on - strand at 4393.886 kb on + strand, within IAI46_20755 at 4393.887 kb on - strand, within IAI46_20755 at 4394.055 kb on - strand, within IAI46_20755 at 4394.055 kb on - strand, within IAI46_20755 at 4394.168 kb on + strand, within IAI46_20755 at 4394.168 kb on + strand, within IAI46_20755 at 4394.368 kb on + strand, within IAI46_20760 at 4394.368 kb on + strand, within IAI46_20760 at 4394.374 kb on + strand, within IAI46_20760 at 4394.375 kb on - strand, within IAI46_20760 at 4394.439 kb on - strand at 4394.451 kb on - strand at 4394.454 kb on - strand at 4394.454 kb on - strand at 4394.456 kb on + strand at 4394.456 kb on + strand at 4394.457 kb on - strand at 4394.468 kb on + strand at 4394.469 kb on - strand at 4394.469 kb on - strand at 4394.475 kb on - strand at 4394.525 kb on + strand at 4394.526 kb on - strand at 4394.547 kb on - strand at 4394.547 kb on - strand at 4394.547 kb on - strand at 4394.598 kb on + strand at 4394.600 kb on + strand at 4394.600 kb on + strand at 4394.601 kb on - strand at 4394.601 kb on - strand at 4394.601 kb on - strand at 4394.601 kb on - strand at 4394.601 kb on - strand at 4394.618 kb on + strand at 4394.652 kb on + strand at 4394.656 kb on + strand at 4394.663 kb on + strand at 4394.732 kb on + strand at 4394.732 kb on + strand at 4394.733 kb on - strand at 4394.763 kb on + strand at 4394.781 kb on + strand at 4394.781 kb on + strand at 4394.784 kb on + strand at 4394.793 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 4,393,196 + IAI46_20750 0.14 +0.6 4,393,196 + IAI46_20750 0.14 +0.1 4,393,196 + IAI46_20750 0.14 +0.0 4,393,197 - IAI46_20750 0.14 +0.8 4,393,348 + IAI46_20750 0.36 +0.8 4,393,349 - IAI46_20750 0.36 -0.5 4,393,351 + IAI46_20750 0.36 +0.7 4,393,352 - IAI46_20750 0.36 +0.2 4,393,352 - IAI46_20750 0.36 -0.5 4,393,394 + IAI46_20750 0.43 +0.1 4,393,395 - IAI46_20750 0.43 +0.8 4,393,396 + IAI46_20750 0.43 +1.8 4,393,396 + IAI46_20750 0.43 -0.4 4,393,440 + IAI46_20750 0.49 +0.4 4,393,440 + IAI46_20750 0.49 +0.3 4,393,441 - IAI46_20750 0.49 +0.1 4,393,449 - IAI46_20750 0.50 -0.4 4,393,449 - IAI46_20750 0.50 +0.4 4,393,495 + IAI46_20750 0.57 +1.7 4,393,495 + IAI46_20750 0.57 -1.0 4,393,495 + IAI46_20750 0.57 -0.9 4,393,496 - IAI46_20750 0.57 +0.4 4,393,553 + IAI46_20750 0.65 +0.1 4,393,736 - +0.4 4,393,736 - +2.5 4,393,824 + -0.5 4,393,824 + -0.1 4,393,824 + -0.9 4,393,825 - +0.4 4,393,886 + IAI46_20755 0.22 -0.0 4,393,887 - IAI46_20755 0.22 +0.4 4,394,055 - IAI46_20755 0.62 +0.5 4,394,055 - IAI46_20755 0.62 -0.1 4,394,168 + IAI46_20755 0.89 +0.1 4,394,168 + IAI46_20755 0.89 +1.5 4,394,368 + IAI46_20760 0.64 +0.9 4,394,368 + IAI46_20760 0.64 -0.4 4,394,374 + IAI46_20760 0.67 -0.1 4,394,375 - IAI46_20760 0.67 -2.6 4,394,439 - -0.3 4,394,451 - -1.2 4,394,454 - +0.4 4,394,454 - -0.3 4,394,456 + +0.4 4,394,456 + -1.7 4,394,457 - +0.1 4,394,468 + +0.7 4,394,469 - -0.1 4,394,469 - +0.6 4,394,475 - +0.1 4,394,525 + +0.7 4,394,526 - +0.4 4,394,547 - +0.9 4,394,547 - +0.3 4,394,547 - -0.3 4,394,598 + -0.0 4,394,600 + -0.2 4,394,600 + +0.1 4,394,601 - +0.0 4,394,601 - -0.0 4,394,601 - +0.3 4,394,601 - +0.2 4,394,601 - +0.9 4,394,618 + -0.7 4,394,652 + +0.3 4,394,656 + +0.0 4,394,663 + -0.5 4,394,732 + +0.2 4,394,732 + -0.2 4,394,733 - +0.3 4,394,763 + +0.1 4,394,781 + +1.6 4,394,781 + -0.1 4,394,784 + +0.9 4,394,793 + -1.8
Or see this region's nucleotide sequence