Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19260 and IAI46_19265 are separated by 11 nucleotides IAI46_19265 and IAI46_19270 are separated by 13 nucleotides IAI46_19270 and IAI46_19275 are separated by 138 nucleotides
IAI46_19260: IAI46_19260 - outer membrane protein assembly factor BamB, at 4,065,470 to 4,066,651
_19260
IAI46_19265: IAI46_19265 - YfgM family protein, at 4,066,663 to 4,067,283
_19265
IAI46_19270: IAI46_19270 - histidine--tRNA ligase, at 4,067,297 to 4,068,571
_19270
IAI46_19275: IAI46_19275 - flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase, at 4,068,710 to 4,069,831
_19275
Position (kb)
4067
4068
4069 Strain fitness (log2 ratio)
-1
0
1 at 4066.435 kb on - strand, within IAI46_19260 at 4066.474 kb on - strand, within IAI46_19260 at 4066.562 kb on - strand at 4066.678 kb on - strand at 4066.902 kb on + strand, within IAI46_19265 at 4066.903 kb on - strand, within IAI46_19265 at 4067.083 kb on - strand, within IAI46_19265 at 4067.115 kb on - strand, within IAI46_19265 at 4067.115 kb on - strand, within IAI46_19265 at 4067.272 kb on - strand at 4067.272 kb on - strand at 4067.274 kb on - strand at 4067.304 kb on - strand at 4067.304 kb on - strand at 4067.304 kb on - strand at 4068.612 kb on - strand at 4068.614 kb on - strand at 4068.614 kb on - strand at 4068.670 kb on - strand at 4068.670 kb on - strand at 4068.702 kb on + strand at 4068.704 kb on + strand at 4068.704 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 4,066,435 - IAI46_19260 0.82 -0.5 4,066,474 - IAI46_19260 0.85 +0.4 4,066,562 - +0.4 4,066,678 - +0.1 4,066,902 + IAI46_19265 0.38 -0.9 4,066,903 - IAI46_19265 0.39 +0.2 4,067,083 - IAI46_19265 0.68 -1.3 4,067,115 - IAI46_19265 0.73 +0.7 4,067,115 - IAI46_19265 0.73 -1.3 4,067,272 - -0.2 4,067,272 - +0.1 4,067,274 - +1.7 4,067,304 - +0.2 4,067,304 - -0.4 4,067,304 - -0.3 4,068,612 - +0.5 4,068,614 - -0.7 4,068,614 - +1.7 4,068,670 - -0.3 4,068,670 - +0.2 4,068,702 + -0.9 4,068,704 + -0.1 4,068,704 + +0.6
Or see this region's nucleotide sequence