Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15580 and IAI46_15585 are separated by 45 nucleotides IAI46_15585 and IAI46_15590 are separated by 180 nucleotides
IAI46_15580: IAI46_15580 - polysaccharide export protein, at 3,266,000 to 3,267,133
_15580
IAI46_15585: IAI46_15585 - UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase, at 3,267,179 to 3,268,228
_15585
IAI46_15590: IAI46_15590 - NAD-dependent epimerase/dehydratase family protein, at 3,268,409 to 3,269,365
_15590
Position (kb)
3267
3268
3269 Strain fitness (log2 ratio)
-1
0
1 at 3266.391 kb on + strand, within IAI46_15580 at 3266.391 kb on + strand, within IAI46_15580 at 3266.613 kb on + strand, within IAI46_15580 at 3266.613 kb on + strand, within IAI46_15580 at 3266.613 kb on + strand, within IAI46_15580 at 3266.613 kb on + strand, within IAI46_15580 at 3266.614 kb on - strand, within IAI46_15580 at 3266.670 kb on + strand, within IAI46_15580 at 3266.671 kb on - strand, within IAI46_15580 at 3266.671 kb on - strand, within IAI46_15580 at 3266.671 kb on - strand, within IAI46_15580 at 3266.671 kb on - strand, within IAI46_15580 at 3266.711 kb on - strand, within IAI46_15580 at 3266.737 kb on + strand, within IAI46_15580 at 3266.738 kb on - strand, within IAI46_15580 at 3266.738 kb on - strand, within IAI46_15580 at 3266.746 kb on - strand, within IAI46_15580 at 3266.751 kb on + strand, within IAI46_15580 at 3266.886 kb on + strand, within IAI46_15580 at 3266.887 kb on - strand, within IAI46_15580 at 3266.936 kb on + strand, within IAI46_15580 at 3266.937 kb on - strand, within IAI46_15580 at 3267.199 kb on + strand at 3267.356 kb on - strand, within IAI46_15585 at 3267.398 kb on - strand, within IAI46_15585 at 3267.649 kb on - strand, within IAI46_15585 at 3267.733 kb on + strand, within IAI46_15585 at 3267.734 kb on - strand, within IAI46_15585 at 3267.789 kb on + strand, within IAI46_15585 at 3267.790 kb on - strand, within IAI46_15585 at 3267.790 kb on - strand, within IAI46_15585 at 3268.024 kb on + strand, within IAI46_15585 at 3268.070 kb on - strand, within IAI46_15585 at 3268.070 kb on - strand, within IAI46_15585 at 3268.077 kb on + strand, within IAI46_15585 at 3268.222 kb on - strand at 3268.223 kb on + strand at 3268.287 kb on + strand at 3268.318 kb on + strand at 3268.355 kb on - strand at 3268.355 kb on - strand at 3268.382 kb on + strand at 3268.398 kb on + strand at 3268.574 kb on + strand, within IAI46_15590 at 3268.602 kb on - strand, within IAI46_15590 at 3268.602 kb on - strand, within IAI46_15590 at 3268.605 kb on + strand, within IAI46_15590 at 3268.619 kb on - strand, within IAI46_15590 at 3268.624 kb on + strand, within IAI46_15590 at 3268.625 kb on - strand, within IAI46_15590 at 3268.710 kb on + strand, within IAI46_15590 at 3268.711 kb on - strand, within IAI46_15590 at 3268.734 kb on + strand, within IAI46_15590 at 3268.764 kb on + strand, within IAI46_15590 at 3268.764 kb on + strand, within IAI46_15590 at 3268.765 kb on - strand, within IAI46_15590 at 3268.780 kb on + strand, within IAI46_15590 at 3268.781 kb on - strand, within IAI46_15590 at 3268.935 kb on + strand, within IAI46_15590 at 3268.936 kb on - strand, within IAI46_15590 at 3269.020 kb on - strand, within IAI46_15590 at 3269.116 kb on - strand, within IAI46_15590 at 3269.116 kb on - strand, within IAI46_15590 at 3269.125 kb on + strand, within IAI46_15590 at 3269.125 kb on + strand, within IAI46_15590 at 3269.125 kb on + strand, within IAI46_15590 at 3269.214 kb on - strand, within IAI46_15590
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 3,266,391 + IAI46_15580 0.34 +0.3 3,266,391 + IAI46_15580 0.34 -0.4 3,266,613 + IAI46_15580 0.54 -0.5 3,266,613 + IAI46_15580 0.54 -0.4 3,266,613 + IAI46_15580 0.54 -0.6 3,266,613 + IAI46_15580 0.54 +0.0 3,266,614 - IAI46_15580 0.54 -1.0 3,266,670 + IAI46_15580 0.59 -0.0 3,266,671 - IAI46_15580 0.59 +0.4 3,266,671 - IAI46_15580 0.59 -0.1 3,266,671 - IAI46_15580 0.59 +0.5 3,266,671 - IAI46_15580 0.59 -0.0 3,266,711 - IAI46_15580 0.63 -0.1 3,266,737 + IAI46_15580 0.65 -0.4 3,266,738 - IAI46_15580 0.65 -0.5 3,266,738 - IAI46_15580 0.65 -0.4 3,266,746 - IAI46_15580 0.66 -0.9 3,266,751 + IAI46_15580 0.66 +0.8 3,266,886 + IAI46_15580 0.78 -0.4 3,266,887 - IAI46_15580 0.78 -0.1 3,266,936 + IAI46_15580 0.83 +0.2 3,266,937 - IAI46_15580 0.83 -0.1 3,267,199 + -0.5 3,267,356 - IAI46_15585 0.17 +0.8 3,267,398 - IAI46_15585 0.21 -0.5 3,267,649 - IAI46_15585 0.45 +0.6 3,267,733 + IAI46_15585 0.53 -0.3 3,267,734 - IAI46_15585 0.53 -0.7 3,267,789 + IAI46_15585 0.58 +1.2 3,267,790 - IAI46_15585 0.58 -0.2 3,267,790 - IAI46_15585 0.58 +0.5 3,268,024 + IAI46_15585 0.80 +0.5 3,268,070 - IAI46_15585 0.85 -0.1 3,268,070 - IAI46_15585 0.85 +0.3 3,268,077 + IAI46_15585 0.86 +0.9 3,268,222 - +1.4 3,268,223 + +0.8 3,268,287 + -0.0 3,268,318 + +1.5 3,268,355 - +0.2 3,268,355 - -1.1 3,268,382 + +0.3 3,268,398 + -0.1 3,268,574 + IAI46_15590 0.17 -0.2 3,268,602 - IAI46_15590 0.20 +0.8 3,268,602 - IAI46_15590 0.20 +0.3 3,268,605 + IAI46_15590 0.20 +0.2 3,268,619 - IAI46_15590 0.22 +0.5 3,268,624 + IAI46_15590 0.22 +0.8 3,268,625 - IAI46_15590 0.23 +1.1 3,268,710 + IAI46_15590 0.31 -0.2 3,268,711 - IAI46_15590 0.32 -0.5 3,268,734 + IAI46_15590 0.34 +0.4 3,268,764 + IAI46_15590 0.37 -0.2 3,268,764 + IAI46_15590 0.37 +0.9 3,268,765 - IAI46_15590 0.37 +0.9 3,268,780 + IAI46_15590 0.39 -0.7 3,268,781 - IAI46_15590 0.39 -1.1 3,268,935 + IAI46_15590 0.55 -0.4 3,268,936 - IAI46_15590 0.55 -1.1 3,269,020 - IAI46_15590 0.64 -0.8 3,269,116 - IAI46_15590 0.74 -0.2 3,269,116 - IAI46_15590 0.74 +0.6 3,269,125 + IAI46_15590 0.75 +0.1 3,269,125 + IAI46_15590 0.75 +0.5 3,269,125 + IAI46_15590 0.75 +0.1 3,269,214 - IAI46_15590 0.84 +0.6
Or see this region's nucleotide sequence