Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14550 and IAI46_14555 are separated by 133 nucleotides IAI46_14555 and IAI46_14560 are separated by 50 nucleotides IAI46_14560 and IAI46_14565 overlap by 14 nucleotides
IAI46_14550: IAI46_14550 - ATP-dependent DNA helicase, at 3,084,408 to 3,086,312
_14550
IAI46_14555: IAI46_14555 - RidA family protein, at 3,086,446 to 3,086,790
_14555
IAI46_14560: IAI46_14560 - multidrug/spermidine efflux SMR transporter subunit MdtI, at 3,086,841 to 3,087,170
_14560
IAI46_14565: IAI46_14565 - multidrug/spermidine efflux SMR transporter subunit MdtJ, at 3,087,157 to 3,087,525
_14565
Position (kb)
3086
3087 Strain fitness (log2 ratio)
-2
-1
0
1 at 3085.603 kb on + strand, within IAI46_14550 at 3085.786 kb on + strand, within IAI46_14550 at 3085.787 kb on - strand, within IAI46_14550 at 3085.996 kb on + strand, within IAI46_14550 at 3085.997 kb on - strand, within IAI46_14550 at 3085.997 kb on - strand, within IAI46_14550 at 3085.997 kb on - strand, within IAI46_14550 at 3086.075 kb on - strand, within IAI46_14550 at 3086.075 kb on - strand, within IAI46_14550 at 3086.150 kb on - strand at 3086.150 kb on - strand at 3086.315 kb on + strand at 3086.316 kb on - strand at 3086.316 kb on - strand at 3086.346 kb on + strand at 3086.347 kb on - strand at 3086.347 kb on - strand at 3086.347 kb on - strand at 3086.431 kb on + strand at 3086.432 kb on - strand at 3086.452 kb on - strand at 3086.513 kb on - strand, within IAI46_14555 at 3086.515 kb on + strand, within IAI46_14555 at 3086.516 kb on - strand, within IAI46_14555 at 3086.516 kb on - strand, within IAI46_14555 at 3086.697 kb on - strand, within IAI46_14555 at 3086.788 kb on + strand at 3086.843 kb on - strand at 3086.977 kb on + strand, within IAI46_14560 at 3086.978 kb on - strand, within IAI46_14560 at 3087.061 kb on - strand, within IAI46_14560 at 3087.151 kb on + strand at 3087.316 kb on - strand, within IAI46_14565 at 3087.373 kb on - strand, within IAI46_14565 at 3087.395 kb on + strand, within IAI46_14565 at 3087.395 kb on + strand, within IAI46_14565 at 3087.396 kb on - strand, within IAI46_14565 at 3087.396 kb on - strand, within IAI46_14565 at 3087.416 kb on + strand, within IAI46_14565 at 3087.417 kb on - strand, within IAI46_14565 at 3087.417 kb on - strand, within IAI46_14565 at 3087.426 kb on + strand, within IAI46_14565 at 3087.519 kb on - strand at 3087.549 kb on - strand at 3087.558 kb on + strand at 3087.730 kb on - strand at 3087.730 kb on - strand at 3087.730 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 3,085,603 + IAI46_14550 0.63 +0.1 3,085,786 + IAI46_14550 0.72 -0.0 3,085,787 - IAI46_14550 0.72 -1.0 3,085,996 + IAI46_14550 0.83 -1.2 3,085,997 - IAI46_14550 0.83 +0.1 3,085,997 - IAI46_14550 0.83 +0.5 3,085,997 - IAI46_14550 0.83 +0.9 3,086,075 - IAI46_14550 0.88 +0.5 3,086,075 - IAI46_14550 0.88 +0.6 3,086,150 - +0.0 3,086,150 - +0.1 3,086,315 + +0.1 3,086,316 - +0.3 3,086,316 - +0.6 3,086,346 + +0.2 3,086,347 - +0.0 3,086,347 - +0.2 3,086,347 - -0.5 3,086,431 + +0.6 3,086,432 - +0.4 3,086,452 - -0.0 3,086,513 - IAI46_14555 0.19 -0.6 3,086,515 + IAI46_14555 0.20 +0.1 3,086,516 - IAI46_14555 0.20 -0.4 3,086,516 - IAI46_14555 0.20 +0.2 3,086,697 - IAI46_14555 0.73 +0.2 3,086,788 + +0.2 3,086,843 - -1.0 3,086,977 + IAI46_14560 0.41 -0.4 3,086,978 - IAI46_14560 0.42 +1.1 3,087,061 - IAI46_14560 0.67 -0.1 3,087,151 + -0.9 3,087,316 - IAI46_14565 0.43 -0.5 3,087,373 - IAI46_14565 0.59 +0.3 3,087,395 + IAI46_14565 0.64 +0.0 3,087,395 + IAI46_14565 0.64 -0.2 3,087,396 - IAI46_14565 0.65 +0.2 3,087,396 - IAI46_14565 0.65 -0.5 3,087,416 + IAI46_14565 0.70 +0.9 3,087,417 - IAI46_14565 0.70 -0.9 3,087,417 - IAI46_14565 0.70 +0.2 3,087,426 + IAI46_14565 0.73 -2.1 3,087,519 - -0.6 3,087,549 - +0.4 3,087,558 + -0.9 3,087,730 - -0.2 3,087,730 - +0.5 3,087,730 - -0.3
Or see this region's nucleotide sequence