Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13605 and IAI46_13610 are separated by 225 nucleotides IAI46_13610 and IAI46_13615 are separated by 54 nucleotides IAI46_13615 and IAI46_13620 are separated by 61 nucleotides
IAI46_13605: IAI46_13605 - hypothetical protein, at 2,908,010 to 2,908,579
_13605
IAI46_13610: IAI46_13610 - hypothetical protein, at 2,908,805 to 2,909,476
_13610
IAI46_13615: IAI46_13615 - Ig domain-containing protein, at 2,909,531 to 2,910,280
_13615
IAI46_13620: IAI46_13620 - hypothetical protein, at 2,910,342 to 2,910,725
_13620
Position (kb)
2908
2909
2910 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2907.988 kb on + strand at 2908.018 kb on + strand at 2908.099 kb on + strand, within IAI46_13605 at 2908.100 kb on - strand, within IAI46_13605 at 2908.124 kb on + strand, within IAI46_13605 at 2908.158 kb on - strand, within IAI46_13605 at 2908.160 kb on + strand, within IAI46_13605 at 2908.161 kb on - strand, within IAI46_13605 at 2908.166 kb on + strand, within IAI46_13605 at 2908.167 kb on - strand, within IAI46_13605 at 2908.228 kb on - strand, within IAI46_13605 at 2908.344 kb on + strand, within IAI46_13605 at 2908.345 kb on - strand, within IAI46_13605 at 2908.357 kb on - strand, within IAI46_13605 at 2908.423 kb on - strand, within IAI46_13605 at 2908.437 kb on + strand, within IAI46_13605 at 2908.438 kb on - strand, within IAI46_13605 at 2908.443 kb on + strand, within IAI46_13605 at 2908.479 kb on - strand, within IAI46_13605 at 2908.479 kb on - strand, within IAI46_13605 at 2908.504 kb on + strand, within IAI46_13605 at 2908.505 kb on - strand, within IAI46_13605 at 2908.505 kb on - strand, within IAI46_13605 at 2908.507 kb on + strand, within IAI46_13605 at 2908.604 kb on + strand at 2908.604 kb on + strand at 2908.605 kb on - strand at 2908.605 kb on - strand at 2908.619 kb on + strand at 2908.619 kb on + strand at 2908.705 kb on + strand at 2908.720 kb on - strand at 2908.730 kb on + strand at 2908.732 kb on + strand at 2908.788 kb on + strand at 2908.789 kb on - strand at 2908.807 kb on - strand at 2908.853 kb on - strand at 2908.896 kb on + strand, within IAI46_13610 at 2908.896 kb on + strand, within IAI46_13610 at 2909.017 kb on - strand, within IAI46_13610 at 2909.101 kb on + strand, within IAI46_13610 at 2909.102 kb on - strand, within IAI46_13610 at 2909.105 kb on - strand, within IAI46_13610 at 2909.159 kb on - strand, within IAI46_13610 at 2909.167 kb on + strand, within IAI46_13610 at 2909.168 kb on - strand, within IAI46_13610 at 2909.192 kb on - strand, within IAI46_13610 at 2909.192 kb on - strand, within IAI46_13610 at 2909.220 kb on - strand, within IAI46_13610 at 2909.233 kb on - strand, within IAI46_13610 at 2909.245 kb on + strand, within IAI46_13610 at 2909.298 kb on + strand, within IAI46_13610 at 2909.299 kb on - strand, within IAI46_13610 at 2909.342 kb on - strand, within IAI46_13610 at 2909.342 kb on - strand, within IAI46_13610 at 2909.384 kb on + strand, within IAI46_13610 at 2909.385 kb on - strand, within IAI46_13610 at 2909.395 kb on + strand, within IAI46_13610 at 2909.396 kb on - strand, within IAI46_13610 at 2909.396 kb on - strand, within IAI46_13610 at 2909.532 kb on + strand at 2909.532 kb on + strand at 2909.710 kb on + strand, within IAI46_13615 at 2909.711 kb on - strand, within IAI46_13615 at 2909.763 kb on - strand, within IAI46_13615 at 2909.813 kb on - strand, within IAI46_13615 at 2909.855 kb on - strand, within IAI46_13615 at 2909.910 kb on + strand, within IAI46_13615 at 2909.911 kb on - strand, within IAI46_13615 at 2909.911 kb on - strand, within IAI46_13615 at 2909.914 kb on + strand, within IAI46_13615 at 2909.930 kb on + strand, within IAI46_13615 at 2909.995 kb on + strand, within IAI46_13615 at 2909.996 kb on - strand, within IAI46_13615 at 2909.996 kb on - strand, within IAI46_13615 at 2910.019 kb on - strand, within IAI46_13615 at 2910.070 kb on - strand, within IAI46_13615 at 2910.081 kb on - strand, within IAI46_13615 at 2910.134 kb on - strand, within IAI46_13615 at 2910.155 kb on - strand, within IAI46_13615 at 2910.189 kb on - strand, within IAI46_13615 at 2910.333 kb on + strand at 2910.333 kb on + strand at 2910.334 kb on - strand at 2910.334 kb on - strand at 2910.334 kb on - strand at 2910.404 kb on + strand, within IAI46_13620 at 2910.405 kb on - strand, within IAI46_13620 at 2910.405 kb on - strand, within IAI46_13620 at 2910.426 kb on + strand, within IAI46_13620
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 2,907,988 + -0.0 2,908,018 + -0.9 2,908,099 + IAI46_13605 0.16 +0.8 2,908,100 - IAI46_13605 0.16 +0.6 2,908,124 + IAI46_13605 0.20 +0.3 2,908,158 - IAI46_13605 0.26 -0.4 2,908,160 + IAI46_13605 0.26 +1.9 2,908,161 - IAI46_13605 0.26 +0.1 2,908,166 + IAI46_13605 0.27 +0.4 2,908,167 - IAI46_13605 0.28 +0.3 2,908,228 - IAI46_13605 0.38 +1.3 2,908,344 + IAI46_13605 0.59 -0.5 2,908,345 - IAI46_13605 0.59 -0.5 2,908,357 - IAI46_13605 0.61 +0.5 2,908,423 - IAI46_13605 0.72 -0.1 2,908,437 + IAI46_13605 0.75 +0.4 2,908,438 - IAI46_13605 0.75 +0.0 2,908,443 + IAI46_13605 0.76 +0.3 2,908,479 - IAI46_13605 0.82 -0.9 2,908,479 - IAI46_13605 0.82 +0.5 2,908,504 + IAI46_13605 0.87 +0.2 2,908,505 - IAI46_13605 0.87 +1.9 2,908,505 - IAI46_13605 0.87 +0.1 2,908,507 + IAI46_13605 0.87 +0.2 2,908,604 + +2.1 2,908,604 + -0.9 2,908,605 - -1.7 2,908,605 - -1.7 2,908,619 + +0.2 2,908,619 + -0.3 2,908,705 + -0.2 2,908,720 - +0.3 2,908,730 + -0.3 2,908,732 + -0.7 2,908,788 + +0.3 2,908,789 - +0.3 2,908,807 - +1.4 2,908,853 - -0.1 2,908,896 + IAI46_13610 0.14 -1.3 2,908,896 + IAI46_13610 0.14 -0.5 2,909,017 - IAI46_13610 0.32 +1.3 2,909,101 + IAI46_13610 0.44 -1.4 2,909,102 - IAI46_13610 0.44 -2.1 2,909,105 - IAI46_13610 0.45 +0.3 2,909,159 - IAI46_13610 0.53 +0.9 2,909,167 + IAI46_13610 0.54 -0.3 2,909,168 - IAI46_13610 0.54 -0.1 2,909,192 - IAI46_13610 0.58 +0.6 2,909,192 - IAI46_13610 0.58 -1.4 2,909,220 - IAI46_13610 0.62 +0.0 2,909,233 - IAI46_13610 0.64 -2.4 2,909,245 + IAI46_13610 0.65 -0.9 2,909,298 + IAI46_13610 0.73 +0.1 2,909,299 - IAI46_13610 0.74 +0.8 2,909,342 - IAI46_13610 0.80 +1.2 2,909,342 - IAI46_13610 0.80 +0.5 2,909,384 + IAI46_13610 0.86 -1.0 2,909,385 - IAI46_13610 0.86 +0.3 2,909,395 + IAI46_13610 0.88 +0.3 2,909,396 - IAI46_13610 0.88 +0.1 2,909,396 - IAI46_13610 0.88 -1.7 2,909,532 + -0.2 2,909,532 + +0.1 2,909,710 + IAI46_13615 0.24 -0.4 2,909,711 - IAI46_13615 0.24 -0.2 2,909,763 - IAI46_13615 0.31 +0.9 2,909,813 - IAI46_13615 0.38 +0.7 2,909,855 - IAI46_13615 0.43 +0.8 2,909,910 + IAI46_13615 0.51 -0.9 2,909,911 - IAI46_13615 0.51 +0.5 2,909,911 - IAI46_13615 0.51 -0.3 2,909,914 + IAI46_13615 0.51 -1.9 2,909,930 + IAI46_13615 0.53 -0.7 2,909,995 + IAI46_13615 0.62 -1.4 2,909,996 - IAI46_13615 0.62 +0.4 2,909,996 - IAI46_13615 0.62 -0.1 2,910,019 - IAI46_13615 0.65 +1.2 2,910,070 - IAI46_13615 0.72 +0.1 2,910,081 - IAI46_13615 0.73 -0.1 2,910,134 - IAI46_13615 0.80 +0.1 2,910,155 - IAI46_13615 0.83 +1.1 2,910,189 - IAI46_13615 0.88 +0.1 2,910,333 + -1.5 2,910,333 + -1.1 2,910,334 - -0.6 2,910,334 - -0.7 2,910,334 - -0.1 2,910,404 + IAI46_13620 0.16 +0.7 2,910,405 - IAI46_13620 0.16 +0.3 2,910,405 - IAI46_13620 0.16 +0.2 2,910,426 + IAI46_13620 0.22 +0.9
Or see this region's nucleotide sequence