Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13085 and IAI46_13090 are separated by 9 nucleotides IAI46_13090 and IAI46_13095 overlap by 4 nucleotides IAI46_13095 and IAI46_13100 overlap by 8 nucleotides
IAI46_13085: IAI46_13085 - branched-chain amino acid ABC transporter permease, at 2,792,931 to 2,793,881
_13085
IAI46_13090: IAI46_13090 - ABC transporter ATP-binding protein, at 2,793,891 to 2,795,003
_13090
IAI46_13095: IAI46_13095 - ABC transporter ATP-binding protein, at 2,795,000 to 2,795,770
_13095
IAI46_13100: IAI46_13100 - ABC transporter ATP-binding protein, at 2,795,763 to 2,796,476
_13100
Position (kb)
2793
2794
2795
2796 Strain fitness (log2 ratio)
-1
0
1 at 2792.930 kb on + strand at 2792.937 kb on - strand at 2792.944 kb on + strand at 2792.982 kb on + strand at 2792.982 kb on + strand at 2793.004 kb on - strand at 2793.016 kb on - strand at 2793.100 kb on + strand, within IAI46_13085 at 2793.101 kb on - strand, within IAI46_13085 at 2793.129 kb on + strand, within IAI46_13085 at 2793.191 kb on + strand, within IAI46_13085 at 2793.314 kb on - strand, within IAI46_13085 at 2793.527 kb on - strand, within IAI46_13085 at 2793.814 kb on + strand at 2793.827 kb on - strand at 2793.911 kb on - strand at 2794.007 kb on + strand, within IAI46_13090 at 2794.008 kb on - strand, within IAI46_13090 at 2794.012 kb on - strand, within IAI46_13090 at 2794.044 kb on + strand, within IAI46_13090 at 2794.134 kb on + strand, within IAI46_13090 at 2794.220 kb on + strand, within IAI46_13090 at 2794.309 kb on - strand, within IAI46_13090 at 2794.309 kb on - strand, within IAI46_13090 at 2794.488 kb on + strand, within IAI46_13090 at 2794.497 kb on + strand, within IAI46_13090 at 2794.500 kb on + strand, within IAI46_13090 at 2794.500 kb on + strand, within IAI46_13090 at 2794.501 kb on - strand, within IAI46_13090 at 2794.535 kb on + strand, within IAI46_13090 at 2794.536 kb on - strand, within IAI46_13090 at 2794.999 kb on + strand at 2795.097 kb on - strand, within IAI46_13095 at 2795.414 kb on + strand, within IAI46_13095 at 2795.463 kb on - strand, within IAI46_13095 at 2795.715 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 2,792,930 + -0.3 2,792,937 - -0.6 2,792,944 + +1.5 2,792,982 + -0.7 2,792,982 + -0.3 2,793,004 - +0.0 2,793,016 - +0.6 2,793,100 + IAI46_13085 0.18 -0.4 2,793,101 - IAI46_13085 0.18 -0.0 2,793,129 + IAI46_13085 0.21 +0.2 2,793,191 + IAI46_13085 0.27 -0.0 2,793,314 - IAI46_13085 0.40 +0.9 2,793,527 - IAI46_13085 0.63 -1.5 2,793,814 + +1.0 2,793,827 - -0.7 2,793,911 - -0.4 2,794,007 + IAI46_13090 0.10 +0.5 2,794,008 - IAI46_13090 0.11 +0.6 2,794,012 - IAI46_13090 0.11 -0.2 2,794,044 + IAI46_13090 0.14 -0.5 2,794,134 + IAI46_13090 0.22 +1.3 2,794,220 + IAI46_13090 0.30 -0.7 2,794,309 - IAI46_13090 0.38 +0.3 2,794,309 - IAI46_13090 0.38 +0.9 2,794,488 + IAI46_13090 0.54 -0.1 2,794,497 + IAI46_13090 0.54 +0.3 2,794,500 + IAI46_13090 0.55 -0.3 2,794,500 + IAI46_13090 0.55 -0.0 2,794,501 - IAI46_13090 0.55 -0.5 2,794,535 + IAI46_13090 0.58 -0.5 2,794,536 - IAI46_13090 0.58 +0.5 2,794,999 + -1.3 2,795,097 - IAI46_13095 0.13 +0.0 2,795,414 + IAI46_13095 0.54 -0.5 2,795,463 - IAI46_13095 0.60 +0.5 2,795,715 + +0.0
Or see this region's nucleotide sequence