Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12510 and IAI46_12515 overlap by 4 nucleotides IAI46_12515 and IAI46_12520 are separated by 12 nucleotides IAI46_12520 and IAI46_12525 are separated by 22 nucleotides IAI46_12525 and IAI46_12530 are separated by 4 nucleotides
IAI46_12510: IAI46_12510 - NADH-quinone oxidoreductase subunit B family protein, at 2,659,703 to 2,660,500
_12510
IAI46_12515: IAI46_12515 - 4Fe-4S dicluster domain-containing protein, at 2,660,497 to 2,661,042
_12515
IAI46_12520: IAI46_12520 - hydrogenase large subunit, at 2,661,055 to 2,662,758
_12520
IAI46_12525: IAI46_12525 - respiratory chain complex I subunit 1 family protein, at 2,662,781 to 2,663,722
_12525
IAI46_12530: IAI46_12530 - proton-conducting membrane transporter, at 2,663,727 to 2,665,595
_12530
Position (kb)
2661
2662
2663 Strain fitness (log2 ratio)
-2
-1
0
1 at 2660.076 kb on + strand, within IAI46_12510 at 2660.077 kb on - strand, within IAI46_12510 at 2660.077 kb on - strand, within IAI46_12510 at 2660.077 kb on - strand, within IAI46_12510 at 2660.180 kb on - strand, within IAI46_12510 at 2660.539 kb on - strand at 2660.649 kb on - strand, within IAI46_12515 at 2660.736 kb on + strand, within IAI46_12515 at 2660.920 kb on + strand, within IAI46_12515 at 2661.028 kb on - strand at 2661.133 kb on + strand at 2661.167 kb on + strand at 2661.167 kb on + strand at 2661.213 kb on + strand at 2661.213 kb on + strand at 2661.230 kb on + strand, within IAI46_12520 at 2661.231 kb on - strand, within IAI46_12520 at 2661.479 kb on + strand, within IAI46_12520 at 2661.603 kb on - strand, within IAI46_12520 at 2661.666 kb on + strand, within IAI46_12520 at 2661.788 kb on + strand, within IAI46_12520 at 2661.858 kb on + strand, within IAI46_12520 at 2661.858 kb on + strand, within IAI46_12520 at 2662.008 kb on - strand, within IAI46_12520 at 2662.074 kb on - strand, within IAI46_12520 at 2662.118 kb on + strand, within IAI46_12520 at 2662.257 kb on - strand, within IAI46_12520 at 2662.533 kb on - strand, within IAI46_12520 at 2662.533 kb on - strand, within IAI46_12520 at 2662.535 kb on + strand, within IAI46_12520 at 2662.608 kb on - strand at 2662.610 kb on + strand at 2662.611 kb on - strand at 2662.731 kb on - strand at 2662.778 kb on + strand at 2662.779 kb on - strand at 2662.880 kb on - strand, within IAI46_12525 at 2663.146 kb on + strand, within IAI46_12525 at 2663.148 kb on + strand, within IAI46_12525 at 2663.149 kb on - strand, within IAI46_12525 at 2663.404 kb on - strand, within IAI46_12525 at 2663.544 kb on - strand, within IAI46_12525 at 2663.544 kb on - strand, within IAI46_12525 at 2663.709 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 2,660,076 + IAI46_12510 0.47 +0.7 2,660,077 - IAI46_12510 0.47 -2.3 2,660,077 - IAI46_12510 0.47 -0.7 2,660,077 - IAI46_12510 0.47 -0.3 2,660,180 - IAI46_12510 0.60 -0.5 2,660,539 - +1.0 2,660,649 - IAI46_12515 0.28 -0.2 2,660,736 + IAI46_12515 0.44 +1.0 2,660,920 + IAI46_12515 0.77 -0.1 2,661,028 - +0.1 2,661,133 + -0.2 2,661,167 + -0.7 2,661,167 + -0.2 2,661,213 + -1.0 2,661,213 + -1.7 2,661,230 + IAI46_12520 0.10 +0.8 2,661,231 - IAI46_12520 0.10 +1.0 2,661,479 + IAI46_12520 0.25 +0.1 2,661,603 - IAI46_12520 0.32 +0.7 2,661,666 + IAI46_12520 0.36 +0.4 2,661,788 + IAI46_12520 0.43 +0.0 2,661,858 + IAI46_12520 0.47 +1.3 2,661,858 + IAI46_12520 0.47 +1.3 2,662,008 - IAI46_12520 0.56 +0.1 2,662,074 - IAI46_12520 0.60 +0.8 2,662,118 + IAI46_12520 0.62 -0.6 2,662,257 - IAI46_12520 0.71 -1.1 2,662,533 - IAI46_12520 0.87 +1.5 2,662,533 - IAI46_12520 0.87 -0.6 2,662,535 + IAI46_12520 0.87 -1.6 2,662,608 - -0.5 2,662,610 + -0.1 2,662,611 - -0.5 2,662,731 - +0.8 2,662,778 + +1.1 2,662,779 - -0.0 2,662,880 - IAI46_12525 0.11 +0.4 2,663,146 + IAI46_12525 0.39 +0.5 2,663,148 + IAI46_12525 0.39 -0.2 2,663,149 - IAI46_12525 0.39 +1.1 2,663,404 - IAI46_12525 0.66 +0.8 2,663,544 - IAI46_12525 0.81 -0.6 2,663,544 - IAI46_12525 0.81 +0.3 2,663,709 + +0.4
Or see this region's nucleotide sequence