Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12030 and IAI46_12035 are separated by 5 nucleotides IAI46_12035 and IAI46_12040 overlap by 1 nucleotides
IAI46_12030: IAI46_12030 - ABC transporter permease, at 2,545,647 to 2,546,663
_12030
IAI46_12035: IAI46_12035 - D,D-dipeptide ABC transporter permease, at 2,546,669 to 2,547,556
_12035
IAI46_12040: IAI46_12040 - ABC transporter ATP-binding protein, at 2,547,556 to 2,548,560
_12040
IAI46_12045: IAI46_12045 - ABC transporter ATP-binding protein, at 2,548,550 to 2,549,497
_12045
Position (kb)
2546
2547
2548 Strain fitness (log2 ratio)
-2
-1
0
1 at 2545.724 kb on + strand at 2545.837 kb on - strand, within IAI46_12030 at 2546.020 kb on - strand, within IAI46_12030 at 2546.027 kb on + strand, within IAI46_12030 at 2546.108 kb on + strand, within IAI46_12030 at 2546.349 kb on + strand, within IAI46_12030 at 2546.350 kb on - strand, within IAI46_12030 at 2546.464 kb on + strand, within IAI46_12030 at 2546.464 kb on + strand, within IAI46_12030 at 2546.464 kb on + strand, within IAI46_12030 at 2546.465 kb on - strand, within IAI46_12030 at 2546.470 kb on - strand, within IAI46_12030 at 2546.521 kb on - strand, within IAI46_12030 at 2546.706 kb on + strand at 2547.049 kb on - strand, within IAI46_12035 at 2547.176 kb on + strand, within IAI46_12035 at 2547.176 kb on + strand, within IAI46_12035 at 2547.177 kb on - strand, within IAI46_12035 at 2547.225 kb on - strand, within IAI46_12035 at 2547.225 kb on - strand, within IAI46_12035 at 2547.226 kb on + strand, within IAI46_12035 at 2547.226 kb on + strand, within IAI46_12035 at 2547.226 kb on + strand, within IAI46_12035 at 2547.227 kb on - strand, within IAI46_12035 at 2547.227 kb on - strand, within IAI46_12035 at 2547.409 kb on + strand, within IAI46_12035 at 2547.431 kb on + strand, within IAI46_12035 at 2547.431 kb on + strand, within IAI46_12035 at 2548.039 kb on - strand, within IAI46_12040 at 2548.241 kb on - strand, within IAI46_12040 at 2548.241 kb on - strand, within IAI46_12040 at 2548.249 kb on + strand, within IAI46_12040 at 2548.250 kb on - strand, within IAI46_12040 at 2548.312 kb on + strand, within IAI46_12040 at 2548.312 kb on + strand, within IAI46_12040 at 2548.325 kb on + strand, within IAI46_12040 at 2548.325 kb on + strand, within IAI46_12040 at 2548.464 kb on + strand at 2548.477 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 2,545,724 + +0.2 2,545,837 - IAI46_12030 0.19 +0.4 2,546,020 - IAI46_12030 0.37 -1.2 2,546,027 + IAI46_12030 0.37 +1.4 2,546,108 + IAI46_12030 0.45 +0.2 2,546,349 + IAI46_12030 0.69 -1.6 2,546,350 - IAI46_12030 0.69 +0.4 2,546,464 + IAI46_12030 0.80 -0.3 2,546,464 + IAI46_12030 0.80 -0.2 2,546,464 + IAI46_12030 0.80 +0.8 2,546,465 - IAI46_12030 0.80 +0.7 2,546,470 - IAI46_12030 0.81 -0.2 2,546,521 - IAI46_12030 0.86 -0.1 2,546,706 + -0.7 2,547,049 - IAI46_12035 0.43 +0.4 2,547,176 + IAI46_12035 0.57 -0.2 2,547,176 + IAI46_12035 0.57 -1.0 2,547,177 - IAI46_12035 0.57 +0.2 2,547,225 - IAI46_12035 0.63 +0.7 2,547,225 - IAI46_12035 0.63 -2.2 2,547,226 + IAI46_12035 0.63 -0.1 2,547,226 + IAI46_12035 0.63 +0.4 2,547,226 + IAI46_12035 0.63 +0.9 2,547,227 - IAI46_12035 0.63 -1.9 2,547,227 - IAI46_12035 0.63 -0.8 2,547,409 + IAI46_12035 0.83 -1.3 2,547,431 + IAI46_12035 0.86 +0.0 2,547,431 + IAI46_12035 0.86 +0.1 2,548,039 - IAI46_12040 0.48 +0.7 2,548,241 - IAI46_12040 0.68 +0.2 2,548,241 - IAI46_12040 0.68 -0.4 2,548,249 + IAI46_12040 0.69 -0.1 2,548,250 - IAI46_12040 0.69 +1.0 2,548,312 + IAI46_12040 0.75 +0.3 2,548,312 + IAI46_12040 0.75 +0.1 2,548,325 + IAI46_12040 0.77 +1.0 2,548,325 + IAI46_12040 0.77 -0.5 2,548,464 + +0.0 2,548,477 - +0.6
Or see this region's nucleotide sequence