Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09410 and IAI46_09415 are separated by 1 nucleotides IAI46_09415 and IAI46_09420 are separated by 64 nucleotides IAI46_09420 and IAI46_09425 are separated by 57 nucleotides IAI46_09425 and IAI46_09430 are separated by 22 nucleotides IAI46_09430 and IAI46_09435 are separated by 108 nucleotides
IAI46_09410: IAI46_09410 - hypothetical protein, at 2,003,237 to 2,003,647
_09410
IAI46_09415: IAI46_09415 - hypothetical protein, at 2,003,649 to 2,003,903
_09415
IAI46_09420: IAI46_09420 - hypothetical protein, at 2,003,968 to 2,004,288
_09420
IAI46_09425: IAI46_09425 - hypothetical protein, at 2,004,346 to 2,004,606
_09425
IAI46_09430: IAI46_09430 - hypothetical protein, at 2,004,629 to 2,005,015
_09430
IAI46_09435: IAI46_09435 - terminase small subunit, at 2,005,124 to 2,005,672
_09435
Position (kb)
2004
2005 Strain fitness (log2 ratio)
-1
0
1
2 at 2004.410 kb on + strand, within IAI46_09425 at 2004.478 kb on + strand, within IAI46_09425 at 2004.479 kb on - strand, within IAI46_09425 at 2004.479 kb on - strand, within IAI46_09425 at 2004.479 kb on - strand, within IAI46_09425 at 2004.522 kb on - strand, within IAI46_09425 at 2004.605 kb on - strand at 2004.724 kb on - strand, within IAI46_09430 at 2004.742 kb on + strand, within IAI46_09430 at 2004.853 kb on - strand, within IAI46_09430 at 2004.870 kb on + strand, within IAI46_09430 at 2005.003 kb on - strand at 2005.003 kb on - strand at 2005.175 kb on + strand at 2005.175 kb on + strand at 2005.175 kb on + strand at 2005.175 kb on + strand at 2005.175 kb on + strand at 2005.176 kb on - strand at 2005.176 kb on - strand at 2005.176 kb on - strand at 2005.176 kb on - strand at 2005.177 kb on + strand at 2005.460 kb on - strand, within IAI46_09435
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 2,004,410 + IAI46_09425 0.25 -1.3 2,004,478 + IAI46_09425 0.51 +0.4 2,004,479 - IAI46_09425 0.51 +0.4 2,004,479 - IAI46_09425 0.51 -0.1 2,004,479 - IAI46_09425 0.51 +0.2 2,004,522 - IAI46_09425 0.67 +2.6 2,004,605 - -0.7 2,004,724 - IAI46_09430 0.25 +0.1 2,004,742 + IAI46_09430 0.29 +0.6 2,004,853 - IAI46_09430 0.58 +0.9 2,004,870 + IAI46_09430 0.62 +0.1 2,005,003 - -1.0 2,005,003 - +0.9 2,005,175 + -0.3 2,005,175 + +0.1 2,005,175 + +2.1 2,005,175 + +1.0 2,005,175 + +0.4 2,005,176 - -0.3 2,005,176 - +0.2 2,005,176 - -0.1 2,005,176 - +0.1 2,005,177 + -1.1 2,005,460 - IAI46_09435 0.61 +0.0
Or see this region's nucleotide sequence