Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08830 and IAI46_08835 overlap by 14 nucleotides IAI46_08835 and IAI46_08840 overlap by 4 nucleotides IAI46_08840 and IAI46_08845 are separated by 271 nucleotides
IAI46_08830: IAI46_08830 - membrane integrity-associated transporter subunit PqiA, at 1,896,106 to 1,897,413
_08830
IAI46_08835: IAI46_08835 - intermembrane transport protein PqiB, at 1,897,400 to 1,899,043
_08835
IAI46_08840: IAI46_08840 - membrane integrity-associated transporter subunit PqiC, at 1,899,040 to 1,899,597
_08840
IAI46_08845: IAI46_08845 - ribosome modulation factor, at 1,899,869 to 1,900,039
_08845
Position (kb)
1897
1898
1899
1900 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1896.425 kb on - strand, within IAI46_08830 at 1896.425 kb on - strand, within IAI46_08830 at 1896.447 kb on + strand, within IAI46_08830 at 1896.447 kb on + strand, within IAI46_08830 at 1896.458 kb on + strand, within IAI46_08830 at 1896.458 kb on + strand, within IAI46_08830 at 1896.642 kb on - strand, within IAI46_08830 at 1896.668 kb on - strand, within IAI46_08830 at 1896.820 kb on - strand, within IAI46_08830 at 1896.874 kb on + strand, within IAI46_08830 at 1896.874 kb on + strand, within IAI46_08830 at 1896.928 kb on - strand, within IAI46_08830 at 1896.928 kb on - strand, within IAI46_08830 at 1896.938 kb on + strand, within IAI46_08830 at 1896.938 kb on - strand, within IAI46_08830 at 1896.940 kb on - strand, within IAI46_08830 at 1896.960 kb on + strand, within IAI46_08830 at 1896.961 kb on - strand, within IAI46_08830 at 1896.961 kb on - strand, within IAI46_08830 at 1896.963 kb on + strand, within IAI46_08830 at 1896.963 kb on + strand, within IAI46_08830 at 1896.964 kb on - strand, within IAI46_08830 at 1896.964 kb on - strand, within IAI46_08830 at 1897.141 kb on - strand, within IAI46_08830 at 1897.177 kb on + strand, within IAI46_08830 at 1897.250 kb on + strand, within IAI46_08830 at 1897.272 kb on + strand, within IAI46_08830 at 1897.276 kb on + strand, within IAI46_08830 at 1897.284 kb on + strand at 1897.323 kb on + strand at 1897.323 kb on + strand at 1897.324 kb on - strand at 1897.324 kb on - strand at 1897.411 kb on + strand at 1897.418 kb on - strand at 1897.576 kb on + strand, within IAI46_08835 at 1897.614 kb on + strand, within IAI46_08835 at 1897.781 kb on + strand, within IAI46_08835 at 1897.781 kb on + strand, within IAI46_08835 at 1897.885 kb on - strand, within IAI46_08835 at 1898.363 kb on + strand, within IAI46_08835 at 1898.363 kb on + strand, within IAI46_08835 at 1898.375 kb on - strand, within IAI46_08835 at 1898.549 kb on + strand, within IAI46_08835 at 1898.804 kb on - strand, within IAI46_08835 at 1898.830 kb on + strand, within IAI46_08835 at 1898.831 kb on - strand, within IAI46_08835 at 1898.894 kb on + strand at 1899.037 kb on + strand at 1899.038 kb on - strand at 1899.110 kb on - strand, within IAI46_08840 at 1899.112 kb on + strand, within IAI46_08840 at 1899.203 kb on - strand, within IAI46_08840 at 1899.247 kb on + strand, within IAI46_08840 at 1899.247 kb on + strand, within IAI46_08840 at 1899.248 kb on - strand, within IAI46_08840 at 1899.252 kb on + strand, within IAI46_08840 at 1899.264 kb on + strand, within IAI46_08840 at 1899.265 kb on - strand, within IAI46_08840 at 1899.315 kb on + strand, within IAI46_08840 at 1899.621 kb on + strand at 1899.621 kb on + strand at 1899.685 kb on - strand at 1899.705 kb on + strand at 1899.734 kb on + strand at 1899.789 kb on - strand at 1899.795 kb on - strand at 1899.801 kb on + strand at 1899.852 kb on + strand at 1899.852 kb on + strand at 1899.852 kb on + strand at 1899.928 kb on + strand, within IAI46_08845 at 1899.960 kb on - strand, within IAI46_08845
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 1,896,425 - IAI46_08830 0.24 +0.9 1,896,425 - IAI46_08830 0.24 -0.6 1,896,447 + IAI46_08830 0.26 +0.7 1,896,447 + IAI46_08830 0.26 +1.6 1,896,458 + IAI46_08830 0.27 +0.2 1,896,458 + IAI46_08830 0.27 -0.1 1,896,642 - IAI46_08830 0.41 -2.1 1,896,668 - IAI46_08830 0.43 +1.4 1,896,820 - IAI46_08830 0.55 -0.3 1,896,874 + IAI46_08830 0.59 +1.0 1,896,874 + IAI46_08830 0.59 +0.6 1,896,928 - IAI46_08830 0.63 +1.1 1,896,928 - IAI46_08830 0.63 +0.8 1,896,938 + IAI46_08830 0.64 -0.2 1,896,938 - IAI46_08830 0.64 -0.6 1,896,940 - IAI46_08830 0.64 +1.9 1,896,960 + IAI46_08830 0.65 -0.7 1,896,961 - IAI46_08830 0.65 +0.7 1,896,961 - IAI46_08830 0.65 -0.5 1,896,963 + IAI46_08830 0.66 +0.1 1,896,963 + IAI46_08830 0.66 -0.4 1,896,964 - IAI46_08830 0.66 -0.8 1,896,964 - IAI46_08830 0.66 +0.1 1,897,141 - IAI46_08830 0.79 +2.1 1,897,177 + IAI46_08830 0.82 +0.2 1,897,250 + IAI46_08830 0.87 +0.4 1,897,272 + IAI46_08830 0.89 -0.5 1,897,276 + IAI46_08830 0.89 -0.0 1,897,284 + -0.1 1,897,323 + -0.0 1,897,323 + -0.5 1,897,324 - +0.3 1,897,324 - +0.4 1,897,411 + -0.6 1,897,418 - -0.9 1,897,576 + IAI46_08835 0.11 +0.1 1,897,614 + IAI46_08835 0.13 +0.6 1,897,781 + IAI46_08835 0.23 -0.8 1,897,781 + IAI46_08835 0.23 +0.4 1,897,885 - IAI46_08835 0.30 +1.4 1,898,363 + IAI46_08835 0.59 +1.1 1,898,363 + IAI46_08835 0.59 -0.2 1,898,375 - IAI46_08835 0.59 +0.5 1,898,549 + IAI46_08835 0.70 +1.7 1,898,804 - IAI46_08835 0.85 +0.4 1,898,830 + IAI46_08835 0.87 +0.4 1,898,831 - IAI46_08835 0.87 +0.9 1,898,894 + -0.1 1,899,037 + -0.1 1,899,038 - +0.9 1,899,110 - IAI46_08840 0.13 -0.1 1,899,112 + IAI46_08840 0.13 +1.0 1,899,203 - IAI46_08840 0.29 -0.1 1,899,247 + IAI46_08840 0.37 +0.5 1,899,247 + IAI46_08840 0.37 -3.0 1,899,248 - IAI46_08840 0.37 +0.3 1,899,252 + IAI46_08840 0.38 +0.2 1,899,264 + IAI46_08840 0.40 -0.2 1,899,265 - IAI46_08840 0.40 +0.4 1,899,315 + IAI46_08840 0.49 +0.0 1,899,621 + +0.5 1,899,621 + -0.8 1,899,685 - -0.9 1,899,705 + +0.9 1,899,734 + +0.9 1,899,789 - -1.2 1,899,795 - +1.7 1,899,801 + +0.6 1,899,852 + +0.8 1,899,852 + +0.4 1,899,852 + +0.5 1,899,928 + IAI46_08845 0.35 +1.1 1,899,960 - IAI46_08845 0.53 -0.5
Or see this region's nucleotide sequence