Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08615 and IAI46_08620 are separated by 453 nucleotides IAI46_08620 and IAI46_08625 are separated by 148 nucleotides
IAI46_08615: IAI46_08615 - formate transporter FocA, at 1,840,261 to 1,841,121
_08615
IAI46_08620: IAI46_08620 - YcaO-like family protein, at 1,841,575 to 1,843,338
_08620
IAI46_08625: IAI46_08625 - L-asparaginase 2, at 1,843,487 to 1,844,533
_08625
Position (kb)
1841
1842
1843
1844 Strain fitness (log2 ratio)
-2
-1
0
1 at 1840.769 kb on + strand, within IAI46_08615 at 1840.770 kb on - strand, within IAI46_08615 at 1840.778 kb on - strand, within IAI46_08615 at 1840.799 kb on + strand, within IAI46_08615 at 1840.885 kb on + strand, within IAI46_08615 at 1840.885 kb on + strand, within IAI46_08615 at 1840.968 kb on - strand, within IAI46_08615 at 1840.989 kb on + strand, within IAI46_08615 at 1841.015 kb on + strand, within IAI46_08615 at 1841.049 kb on - strand at 1841.092 kb on + strand at 1841.092 kb on + strand at 1841.124 kb on + strand at 1841.124 kb on + strand at 1841.163 kb on - strand at 1841.163 kb on - strand at 1841.163 kb on - strand at 1841.165 kb on + strand at 1841.177 kb on - strand at 1841.179 kb on - strand at 1841.568 kb on - strand at 1841.568 kb on - strand at 1841.568 kb on - strand at 1841.622 kb on - strand at 1841.745 kb on - strand at 1841.745 kb on - strand at 1841.765 kb on + strand, within IAI46_08620 at 1841.768 kb on + strand, within IAI46_08620 at 1841.768 kb on + strand, within IAI46_08620 at 1841.828 kb on + strand, within IAI46_08620 at 1841.828 kb on + strand, within IAI46_08620 at 1841.831 kb on + strand, within IAI46_08620 at 1841.831 kb on + strand, within IAI46_08620 at 1841.831 kb on + strand, within IAI46_08620 at 1841.831 kb on + strand, within IAI46_08620 at 1841.832 kb on - strand, within IAI46_08620 at 1841.832 kb on - strand, within IAI46_08620 at 1841.948 kb on - strand, within IAI46_08620 at 1841.959 kb on - strand, within IAI46_08620 at 1842.158 kb on + strand, within IAI46_08620 at 1842.197 kb on + strand, within IAI46_08620 at 1842.215 kb on + strand, within IAI46_08620 at 1842.227 kb on + strand, within IAI46_08620 at 1842.227 kb on + strand, within IAI46_08620 at 1842.227 kb on + strand, within IAI46_08620 at 1842.228 kb on - strand, within IAI46_08620 at 1842.228 kb on - strand, within IAI46_08620 at 1842.228 kb on - strand, within IAI46_08620 at 1842.228 kb on - strand, within IAI46_08620 at 1842.228 kb on - strand, within IAI46_08620 at 1842.228 kb on - strand, within IAI46_08620 at 1842.340 kb on - strand, within IAI46_08620 at 1842.579 kb on + strand, within IAI46_08620 at 1842.757 kb on + strand, within IAI46_08620 at 1842.758 kb on - strand, within IAI46_08620 at 1842.807 kb on - strand, within IAI46_08620 at 1842.950 kb on + strand, within IAI46_08620 at 1842.950 kb on + strand, within IAI46_08620 at 1842.951 kb on - strand, within IAI46_08620 at 1843.070 kb on + strand, within IAI46_08620 at 1843.070 kb on + strand, within IAI46_08620 at 1843.071 kb on - strand, within IAI46_08620 at 1843.088 kb on + strand, within IAI46_08620 at 1843.088 kb on + strand, within IAI46_08620 at 1843.089 kb on - strand, within IAI46_08620 at 1843.089 kb on - strand, within IAI46_08620 at 1843.089 kb on - strand, within IAI46_08620 at 1843.089 kb on - strand, within IAI46_08620 at 1843.089 kb on - strand, within IAI46_08620 at 1843.089 kb on - strand, within IAI46_08620 at 1843.112 kb on + strand, within IAI46_08620 at 1843.113 kb on - strand, within IAI46_08620 at 1843.210 kb on + strand at 1843.210 kb on + strand at 1843.211 kb on - strand at 1843.211 kb on - strand at 1843.211 kb on - strand at 1843.211 kb on - strand at 1843.211 kb on - strand at 1843.249 kb on - strand at 1843.291 kb on - strand at 1843.388 kb on - strand at 1843.404 kb on + strand at 1843.404 kb on + strand at 1843.405 kb on - strand at 1843.470 kb on + strand at 1843.518 kb on + strand at 1843.564 kb on + strand at 1843.564 kb on + strand at 1843.625 kb on + strand, within IAI46_08625 at 1843.625 kb on + strand, within IAI46_08625 at 1843.625 kb on + strand, within IAI46_08625 at 1843.626 kb on - strand, within IAI46_08625 at 1843.626 kb on - strand, within IAI46_08625 at 1843.669 kb on - strand, within IAI46_08625 at 1843.841 kb on + strand, within IAI46_08625 at 1843.941 kb on - strand, within IAI46_08625 at 1843.942 kb on + strand, within IAI46_08625 at 1844.044 kb on + strand, within IAI46_08625 at 1844.044 kb on + strand, within IAI46_08625 at 1844.047 kb on + strand, within IAI46_08625 at 1844.048 kb on - strand, within IAI46_08625 at 1844.048 kb on - strand, within IAI46_08625 at 1844.170 kb on + strand, within IAI46_08625 at 1844.200 kb on + strand, within IAI46_08625 at 1844.200 kb on + strand, within IAI46_08625 at 1844.201 kb on - strand, within IAI46_08625 at 1844.201 kb on - strand, within IAI46_08625 at 1844.205 kb on - strand, within IAI46_08625 at 1844.205 kb on - strand, within IAI46_08625 at 1844.211 kb on - strand, within IAI46_08625 at 1844.259 kb on - strand, within IAI46_08625 at 1844.259 kb on - strand, within IAI46_08625 at 1844.317 kb on + strand, within IAI46_08625 at 1844.318 kb on - strand, within IAI46_08625
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 1,840,769 + IAI46_08615 0.59 +0.4 1,840,770 - IAI46_08615 0.59 +1.6 1,840,778 - IAI46_08615 0.60 -0.6 1,840,799 + IAI46_08615 0.62 -1.0 1,840,885 + IAI46_08615 0.72 +0.2 1,840,885 + IAI46_08615 0.72 -1.2 1,840,968 - IAI46_08615 0.82 +0.3 1,840,989 + IAI46_08615 0.85 -0.4 1,841,015 + IAI46_08615 0.88 +1.0 1,841,049 - -0.5 1,841,092 + -1.2 1,841,092 + -0.2 1,841,124 + +0.5 1,841,124 + -0.5 1,841,163 - +0.0 1,841,163 - -0.5 1,841,163 - +0.1 1,841,165 + -0.3 1,841,177 - +0.5 1,841,179 - -0.2 1,841,568 - -0.5 1,841,568 - -0.2 1,841,568 - +0.2 1,841,622 - +0.4 1,841,745 - +1.0 1,841,745 - +0.2 1,841,765 + IAI46_08620 0.11 +0.6 1,841,768 + IAI46_08620 0.11 -0.2 1,841,768 + IAI46_08620 0.11 +0.4 1,841,828 + IAI46_08620 0.14 -0.1 1,841,828 + IAI46_08620 0.14 +0.1 1,841,831 + IAI46_08620 0.15 -1.3 1,841,831 + IAI46_08620 0.15 +0.8 1,841,831 + IAI46_08620 0.15 +0.3 1,841,831 + IAI46_08620 0.15 +1.0 1,841,832 - IAI46_08620 0.15 +1.6 1,841,832 - IAI46_08620 0.15 +0.4 1,841,948 - IAI46_08620 0.21 -1.3 1,841,959 - IAI46_08620 0.22 +1.2 1,842,158 + IAI46_08620 0.33 +1.1 1,842,197 + IAI46_08620 0.35 +0.7 1,842,215 + IAI46_08620 0.36 +0.7 1,842,227 + IAI46_08620 0.37 +0.9 1,842,227 + IAI46_08620 0.37 -0.7 1,842,227 + IAI46_08620 0.37 +0.2 1,842,228 - IAI46_08620 0.37 -0.5 1,842,228 - IAI46_08620 0.37 -0.0 1,842,228 - IAI46_08620 0.37 +0.4 1,842,228 - IAI46_08620 0.37 -0.1 1,842,228 - IAI46_08620 0.37 -1.0 1,842,228 - IAI46_08620 0.37 -0.2 1,842,340 - IAI46_08620 0.43 -0.9 1,842,579 + IAI46_08620 0.57 -0.6 1,842,757 + IAI46_08620 0.67 -0.4 1,842,758 - IAI46_08620 0.67 -0.7 1,842,807 - IAI46_08620 0.70 +1.0 1,842,950 + IAI46_08620 0.78 +0.3 1,842,950 + IAI46_08620 0.78 +0.0 1,842,951 - IAI46_08620 0.78 +0.2 1,843,070 + IAI46_08620 0.85 -1.2 1,843,070 + IAI46_08620 0.85 -1.0 1,843,071 - IAI46_08620 0.85 +0.2 1,843,088 + IAI46_08620 0.86 +0.0 1,843,088 + IAI46_08620 0.86 -0.6 1,843,089 - IAI46_08620 0.86 +0.3 1,843,089 - IAI46_08620 0.86 +0.0 1,843,089 - IAI46_08620 0.86 +0.1 1,843,089 - IAI46_08620 0.86 +0.9 1,843,089 - IAI46_08620 0.86 +0.0 1,843,089 - IAI46_08620 0.86 +0.1 1,843,112 + IAI46_08620 0.87 +0.8 1,843,113 - IAI46_08620 0.87 +0.1 1,843,210 + -0.3 1,843,210 + -0.2 1,843,211 - +0.5 1,843,211 - -0.6 1,843,211 - +0.8 1,843,211 - -0.2 1,843,211 - +0.1 1,843,249 - -2.0 1,843,291 - +0.7 1,843,388 - -0.4 1,843,404 + +0.5 1,843,404 + +0.6 1,843,405 - -0.1 1,843,470 + -0.5 1,843,518 + +0.1 1,843,564 + -0.0 1,843,564 + +1.0 1,843,625 + IAI46_08625 0.13 -0.4 1,843,625 + IAI46_08625 0.13 +0.4 1,843,625 + IAI46_08625 0.13 +0.6 1,843,626 - IAI46_08625 0.13 -1.5 1,843,626 - IAI46_08625 0.13 -0.2 1,843,669 - IAI46_08625 0.17 +0.4 1,843,841 + IAI46_08625 0.34 +0.5 1,843,941 - IAI46_08625 0.43 -0.6 1,843,942 + IAI46_08625 0.43 -0.4 1,844,044 + IAI46_08625 0.53 -0.6 1,844,044 + IAI46_08625 0.53 +0.8 1,844,047 + IAI46_08625 0.53 +0.5 1,844,048 - IAI46_08625 0.54 -0.3 1,844,048 - IAI46_08625 0.54 -0.6 1,844,170 + IAI46_08625 0.65 -0.0 1,844,200 + IAI46_08625 0.68 -0.1 1,844,200 + IAI46_08625 0.68 -0.3 1,844,201 - IAI46_08625 0.68 +0.1 1,844,201 - IAI46_08625 0.68 +0.8 1,844,205 - IAI46_08625 0.69 +1.1 1,844,205 - IAI46_08625 0.69 +0.1 1,844,211 - IAI46_08625 0.69 +0.4 1,844,259 - IAI46_08625 0.74 +0.7 1,844,259 - IAI46_08625 0.74 +0.3 1,844,317 + IAI46_08625 0.79 -0.0 1,844,318 - IAI46_08625 0.79 -0.9
Or see this region's nucleotide sequence