Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08555 and IAI46_08560 are separated by 120 nucleotides IAI46_08560 and IAI46_08565 are separated by 346 nucleotides IAI46_08565 and IAI46_08570 are separated by 7 nucleotides
IAI46_08555: IAI46_08555 - leucine-responsive transcriptional regulator Lrp, at 1,822,594 to 1,823,088
_08555
IAI46_08560: IAI46_08560 - DNA translocase FtsK 4TM domain-containing protein, at 1,823,209 to 1,826,784
_08560
IAI46_08565: IAI46_08565 - outer membrane lipoprotein chaperone LolA, at 1,827,131 to 1,827,742
_08565
IAI46_08570: IAI46_08570 - replication-associated recombination protein A, at 1,827,750 to 1,829,093
_08570
Position (kb)
1823
1824
1825
1826
1827 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1822.217 kb on - strand at 1822.232 kb on + strand at 1822.294 kb on + strand at 1822.295 kb on - strand at 1822.325 kb on + strand at 1822.432 kb on + strand at 1822.495 kb on + strand at 1822.532 kb on + strand at 1822.590 kb on - strand at 1822.590 kb on - strand at 1822.592 kb on + strand at 1822.606 kb on - strand at 1822.677 kb on + strand, within IAI46_08555 at 1822.677 kb on + strand, within IAI46_08555 at 1822.677 kb on + strand, within IAI46_08555 at 1822.730 kb on + strand, within IAI46_08555 at 1822.731 kb on - strand, within IAI46_08555 at 1822.798 kb on + strand, within IAI46_08555 at 1822.798 kb on + strand, within IAI46_08555 at 1822.977 kb on + strand, within IAI46_08555 at 1822.978 kb on - strand, within IAI46_08555 at 1823.028 kb on + strand, within IAI46_08555 at 1823.028 kb on + strand, within IAI46_08555 at 1823.028 kb on + strand, within IAI46_08555 at 1823.028 kb on + strand, within IAI46_08555 at 1823.032 kb on + strand, within IAI46_08555 at 1823.039 kb on + strand at 1823.176 kb on + strand at 1823.176 kb on + strand at 1823.176 kb on + strand at 1823.185 kb on + strand at 1823.297 kb on + strand at 1826.808 kb on - strand at 1826.813 kb on + strand at 1826.898 kb on + strand at 1826.899 kb on - strand at 1826.899 kb on - strand at 1826.921 kb on + strand at 1826.921 kb on + strand at 1826.999 kb on - strand at 1827.056 kb on + strand at 1827.065 kb on + strand at 1827.115 kb on + strand at 1827.115 kb on + strand at 1827.755 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 1,822,217 - -0.0 1,822,232 + +1.2 1,822,294 + -0.0 1,822,295 - -2.7 1,822,325 + -1.3 1,822,432 + -0.8 1,822,495 + +0.1 1,822,532 + +0.1 1,822,590 - -1.7 1,822,590 - -1.2 1,822,592 + +0.4 1,822,606 - +0.5 1,822,677 + IAI46_08555 0.17 -0.3 1,822,677 + IAI46_08555 0.17 +0.1 1,822,677 + IAI46_08555 0.17 -0.2 1,822,730 + IAI46_08555 0.27 -1.2 1,822,731 - IAI46_08555 0.28 -0.2 1,822,798 + IAI46_08555 0.41 -0.5 1,822,798 + IAI46_08555 0.41 -0.3 1,822,977 + IAI46_08555 0.77 -0.6 1,822,978 - IAI46_08555 0.78 -0.6 1,823,028 + IAI46_08555 0.88 -2.3 1,823,028 + IAI46_08555 0.88 -0.1 1,823,028 + IAI46_08555 0.88 -0.7 1,823,028 + IAI46_08555 0.88 -0.1 1,823,032 + IAI46_08555 0.88 -0.2 1,823,039 + -0.9 1,823,176 + -0.4 1,823,176 + -0.3 1,823,176 + +0.5 1,823,185 + +1.8 1,823,297 + -1.4 1,826,808 - +0.1 1,826,813 + +1.0 1,826,898 + +0.9 1,826,899 - -0.2 1,826,899 - -0.2 1,826,921 + -0.3 1,826,921 + +1.1 1,826,999 - -0.9 1,827,056 + +0.8 1,827,065 + +0.0 1,827,115 + +0.3 1,827,115 + +0.2 1,827,755 + -0.5
Or see this region's nucleotide sequence