Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08245 and IAI46_08250 are separated by 11 nucleotides IAI46_08250 and IAI46_08255 are separated by 131 nucleotides
IAI46_08245: IAI46_08245 - magnesium/cobalt transporter CorA, at 1,755,111 to 1,756,091
_08245
IAI46_08250: IAI46_08250 - GNAT family N-acetyltransferase, at 1,756,103 to 1,756,522
_08250
IAI46_08255: IAI46_08255 - PQQ-dependent sugar dehydrogenase, at 1,756,654 to 1,757,751
_08255
Position (kb)
1756
1757 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1755.235 kb on + strand, within IAI46_08245 at 1755.236 kb on - strand, within IAI46_08245 at 1755.236 kb on - strand, within IAI46_08245 at 1755.254 kb on + strand, within IAI46_08245 at 1755.255 kb on - strand, within IAI46_08245 at 1755.414 kb on + strand, within IAI46_08245 at 1755.414 kb on + strand, within IAI46_08245 at 1755.415 kb on - strand, within IAI46_08245 at 1755.419 kb on - strand, within IAI46_08245 at 1755.624 kb on - strand, within IAI46_08245 at 1755.628 kb on + strand, within IAI46_08245 at 1755.629 kb on - strand, within IAI46_08245 at 1755.632 kb on + strand, within IAI46_08245 at 1755.632 kb on + strand, within IAI46_08245 at 1755.632 kb on + strand, within IAI46_08245 at 1755.632 kb on + strand, within IAI46_08245 at 1755.632 kb on + strand, within IAI46_08245 at 1755.633 kb on - strand, within IAI46_08245 at 1755.633 kb on - strand, within IAI46_08245 at 1755.633 kb on - strand, within IAI46_08245 at 1755.633 kb on - strand, within IAI46_08245 at 1755.636 kb on + strand, within IAI46_08245 at 1755.636 kb on + strand, within IAI46_08245 at 1755.637 kb on - strand, within IAI46_08245 at 1755.639 kb on + strand, within IAI46_08245 at 1755.693 kb on - strand, within IAI46_08245 at 1755.728 kb on - strand, within IAI46_08245 at 1755.728 kb on - strand, within IAI46_08245 at 1755.839 kb on + strand, within IAI46_08245 at 1755.857 kb on - strand, within IAI46_08245 at 1755.944 kb on + strand, within IAI46_08245 at 1755.945 kb on - strand, within IAI46_08245 at 1756.013 kb on + strand at 1756.054 kb on + strand at 1756.054 kb on + strand at 1756.054 kb on + strand at 1756.054 kb on + strand at 1756.054 kb on + strand at 1756.054 kb on + strand at 1756.055 kb on - strand at 1756.055 kb on - strand at 1756.055 kb on - strand at 1756.216 kb on + strand, within IAI46_08250 at 1756.217 kb on - strand, within IAI46_08250 at 1756.222 kb on + strand, within IAI46_08250 at 1756.236 kb on + strand, within IAI46_08250 at 1756.281 kb on - strand, within IAI46_08250 at 1756.420 kb on + strand, within IAI46_08250 at 1756.441 kb on - strand, within IAI46_08250 at 1756.441 kb on - strand, within IAI46_08250 at 1756.441 kb on - strand, within IAI46_08250 at 1756.459 kb on + strand, within IAI46_08250 at 1756.549 kb on + strand at 1756.549 kb on + strand at 1756.549 kb on + strand at 1756.549 kb on + strand at 1756.618 kb on - strand at 1756.618 kb on - strand at 1756.626 kb on + strand at 1756.627 kb on - strand at 1756.654 kb on - strand at 1756.654 kb on - strand at 1756.668 kb on + strand at 1756.668 kb on + strand at 1756.873 kb on + strand, within IAI46_08255 at 1756.873 kb on + strand, within IAI46_08255 at 1756.873 kb on + strand, within IAI46_08255 at 1756.874 kb on - strand, within IAI46_08255 at 1756.874 kb on - strand, within IAI46_08255 at 1756.874 kb on - strand, within IAI46_08255 at 1756.975 kb on - strand, within IAI46_08255 at 1757.007 kb on + strand, within IAI46_08255 at 1757.142 kb on + strand, within IAI46_08255 at 1757.177 kb on + strand, within IAI46_08255 at 1757.177 kb on + strand, within IAI46_08255 at 1757.177 kb on + strand, within IAI46_08255 at 1757.178 kb on - strand, within IAI46_08255 at 1757.272 kb on + strand, within IAI46_08255 at 1757.364 kb on + strand, within IAI46_08255 at 1757.422 kb on + strand, within IAI46_08255 at 1757.422 kb on + strand, within IAI46_08255 at 1757.489 kb on - strand, within IAI46_08255
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 1,755,235 + IAI46_08245 0.13 -0.2 1,755,236 - IAI46_08245 0.13 -1.5 1,755,236 - IAI46_08245 0.13 -0.5 1,755,254 + IAI46_08245 0.15 +0.1 1,755,255 - IAI46_08245 0.15 +1.3 1,755,414 + IAI46_08245 0.31 +0.5 1,755,414 + IAI46_08245 0.31 +0.5 1,755,415 - IAI46_08245 0.31 +0.5 1,755,419 - IAI46_08245 0.31 +0.5 1,755,624 - IAI46_08245 0.52 -1.1 1,755,628 + IAI46_08245 0.53 +2.0 1,755,629 - IAI46_08245 0.53 +0.9 1,755,632 + IAI46_08245 0.53 +0.3 1,755,632 + IAI46_08245 0.53 +0.6 1,755,632 + IAI46_08245 0.53 +0.5 1,755,632 + IAI46_08245 0.53 +0.6 1,755,632 + IAI46_08245 0.53 -2.0 1,755,633 - IAI46_08245 0.53 -2.0 1,755,633 - IAI46_08245 0.53 +0.9 1,755,633 - IAI46_08245 0.53 +0.3 1,755,633 - IAI46_08245 0.53 +0.1 1,755,636 + IAI46_08245 0.54 -0.8 1,755,636 + IAI46_08245 0.54 +0.3 1,755,637 - IAI46_08245 0.54 +0.3 1,755,639 + IAI46_08245 0.54 +0.3 1,755,693 - IAI46_08245 0.59 +0.8 1,755,728 - IAI46_08245 0.63 +0.3 1,755,728 - IAI46_08245 0.63 -0.4 1,755,839 + IAI46_08245 0.74 +1.1 1,755,857 - IAI46_08245 0.76 -0.2 1,755,944 + IAI46_08245 0.85 -1.1 1,755,945 - IAI46_08245 0.85 +0.4 1,756,013 + +0.5 1,756,054 + +0.6 1,756,054 + +0.7 1,756,054 + +1.9 1,756,054 + -0.8 1,756,054 + +0.0 1,756,054 + +0.1 1,756,055 - -0.5 1,756,055 - -0.0 1,756,055 - +0.2 1,756,216 + IAI46_08250 0.27 +1.0 1,756,217 - IAI46_08250 0.27 -0.9 1,756,222 + IAI46_08250 0.28 +0.2 1,756,236 + IAI46_08250 0.32 +0.1 1,756,281 - IAI46_08250 0.42 +0.0 1,756,420 + IAI46_08250 0.75 -0.0 1,756,441 - IAI46_08250 0.80 +1.2 1,756,441 - IAI46_08250 0.80 +1.2 1,756,441 - IAI46_08250 0.80 +0.5 1,756,459 + IAI46_08250 0.85 -0.5 1,756,549 + -0.0 1,756,549 + -1.0 1,756,549 + +0.4 1,756,549 + -0.9 1,756,618 - +0.3 1,756,618 - +0.7 1,756,626 + -0.7 1,756,627 - -0.4 1,756,654 - +0.1 1,756,654 - +0.2 1,756,668 + -0.8 1,756,668 + -0.5 1,756,873 + IAI46_08255 0.20 -0.4 1,756,873 + IAI46_08255 0.20 +0.3 1,756,873 + IAI46_08255 0.20 +0.5 1,756,874 - IAI46_08255 0.20 -0.2 1,756,874 - IAI46_08255 0.20 +0.4 1,756,874 - IAI46_08255 0.20 +0.2 1,756,975 - IAI46_08255 0.29 +0.4 1,757,007 + IAI46_08255 0.32 +1.3 1,757,142 + IAI46_08255 0.44 -0.4 1,757,177 + IAI46_08255 0.48 +0.5 1,757,177 + IAI46_08255 0.48 +0.9 1,757,177 + IAI46_08255 0.48 -0.1 1,757,178 - IAI46_08255 0.48 +1.8 1,757,272 + IAI46_08255 0.56 +0.6 1,757,364 + IAI46_08255 0.65 +0.4 1,757,422 + IAI46_08255 0.70 +0.0 1,757,422 + IAI46_08255 0.70 +0.7 1,757,489 - IAI46_08255 0.76 -0.9
Or see this region's nucleotide sequence