Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_07500 and IAI46_07505 are separated by 165 nucleotides IAI46_07505 and IAI46_07510 are separated by 119 nucleotides IAI46_07510 and IAI46_07515 are separated by 304 nucleotides
IAI46_07500: IAI46_07500 - DUF1471 domain-containing protein, at 1,585,691 to 1,585,948
_07500
IAI46_07505: IAI46_07505 - flavin reductase family protein, at 1,586,114 to 1,586,752
_07505
IAI46_07510: IAI46_07510 - 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF, at 1,586,872 to 1,587,837
_07510
IAI46_07515: IAI46_07515 - PAS domain-containing methyl-accepting chemotaxis protein, at 1,588,142 to 1,589,446
_07515
Position (kb)
1586
1587
1588 Strain fitness (log2 ratio)
-1
0
1
2 at 1586.172 kb on + strand at 1586.175 kb on + strand at 1586.175 kb on + strand at 1586.175 kb on + strand at 1586.175 kb on + strand at 1586.176 kb on - strand at 1586.176 kb on - strand at 1586.176 kb on - strand at 1586.226 kb on + strand, within IAI46_07505 at 1586.264 kb on + strand, within IAI46_07505 at 1586.264 kb on + strand, within IAI46_07505 at 1586.264 kb on + strand, within IAI46_07505 at 1586.265 kb on - strand, within IAI46_07505 at 1586.265 kb on - strand, within IAI46_07505 at 1586.265 kb on - strand, within IAI46_07505 at 1586.611 kb on - strand, within IAI46_07505 at 1586.611 kb on - strand, within IAI46_07505 at 1586.727 kb on + strand at 1586.727 kb on + strand at 1586.728 kb on - strand at 1586.730 kb on + strand at 1586.753 kb on - strand at 1586.753 kb on - strand at 1586.753 kb on - strand at 1586.770 kb on + strand at 1586.784 kb on - strand at 1586.827 kb on - strand at 1586.831 kb on + strand at 1586.831 kb on + strand at 1586.831 kb on + strand at 1586.850 kb on - strand at 1586.855 kb on + strand at 1587.045 kb on + strand, within IAI46_07510 at 1587.079 kb on + strand, within IAI46_07510 at 1587.080 kb on - strand, within IAI46_07510 at 1587.080 kb on - strand, within IAI46_07510 at 1587.112 kb on + strand, within IAI46_07510 at 1587.145 kb on + strand, within IAI46_07510 at 1587.177 kb on + strand, within IAI46_07510 at 1587.178 kb on - strand, within IAI46_07510 at 1587.227 kb on + strand, within IAI46_07510 at 1587.227 kb on + strand, within IAI46_07510 at 1587.228 kb on - strand, within IAI46_07510 at 1587.511 kb on - strand, within IAI46_07510 at 1587.567 kb on + strand, within IAI46_07510 at 1587.633 kb on + strand, within IAI46_07510 at 1587.666 kb on + strand, within IAI46_07510 at 1587.666 kb on + strand, within IAI46_07510 at 1587.666 kb on + strand, within IAI46_07510 at 1587.666 kb on + strand, within IAI46_07510 at 1587.667 kb on - strand, within IAI46_07510 at 1587.667 kb on - strand, within IAI46_07510 at 1587.698 kb on - strand, within IAI46_07510 at 1587.836 kb on - strand at 1587.923 kb on - strand at 1587.973 kb on + strand at 1588.029 kb on + strand at 1588.029 kb on + strand at 1588.141 kb on + strand at 1588.164 kb on + strand at 1588.334 kb on + strand, within IAI46_07515 at 1588.352 kb on + strand, within IAI46_07515 at 1588.370 kb on - strand, within IAI46_07515 at 1588.374 kb on + strand, within IAI46_07515 at 1588.379 kb on - strand, within IAI46_07515 at 1588.404 kb on + strand, within IAI46_07515 at 1588.452 kb on - strand, within IAI46_07515 at 1588.452 kb on - strand, within IAI46_07515 at 1588.452 kb on - strand, within IAI46_07515 at 1588.452 kb on - strand, within IAI46_07515 at 1588.468 kb on + strand, within IAI46_07515 at 1588.627 kb on + strand, within IAI46_07515 at 1588.627 kb on + strand, within IAI46_07515 at 1588.627 kb on + strand, within IAI46_07515 at 1588.757 kb on - strand, within IAI46_07515 at 1588.818 kb on - strand, within IAI46_07515
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 1,586,172 + +0.1 1,586,175 + +0.5 1,586,175 + +0.8 1,586,175 + -0.5 1,586,175 + -0.6 1,586,176 - +0.5 1,586,176 - -0.3 1,586,176 - -0.5 1,586,226 + IAI46_07505 0.18 -0.0 1,586,264 + IAI46_07505 0.23 -0.7 1,586,264 + IAI46_07505 0.23 -0.0 1,586,264 + IAI46_07505 0.23 +1.0 1,586,265 - IAI46_07505 0.24 -0.4 1,586,265 - IAI46_07505 0.24 -0.2 1,586,265 - IAI46_07505 0.24 +0.2 1,586,611 - IAI46_07505 0.78 +2.3 1,586,611 - IAI46_07505 0.78 +0.0 1,586,727 + +0.2 1,586,727 + -1.0 1,586,728 - -0.0 1,586,730 + -0.7 1,586,753 - +0.1 1,586,753 - +0.2 1,586,753 - -0.0 1,586,770 + +0.0 1,586,784 - +0.1 1,586,827 - +1.4 1,586,831 + -1.2 1,586,831 + -0.0 1,586,831 + +0.6 1,586,850 - +0.3 1,586,855 + +0.4 1,587,045 + IAI46_07510 0.18 -0.6 1,587,079 + IAI46_07510 0.21 +1.1 1,587,080 - IAI46_07510 0.22 -0.4 1,587,080 - IAI46_07510 0.22 +0.2 1,587,112 + IAI46_07510 0.25 -0.6 1,587,145 + IAI46_07510 0.28 -0.1 1,587,177 + IAI46_07510 0.32 +0.3 1,587,178 - IAI46_07510 0.32 -0.1 1,587,227 + IAI46_07510 0.37 +0.9 1,587,227 + IAI46_07510 0.37 +0.2 1,587,228 - IAI46_07510 0.37 +1.4 1,587,511 - IAI46_07510 0.66 +0.6 1,587,567 + IAI46_07510 0.72 +0.3 1,587,633 + IAI46_07510 0.79 -0.3 1,587,666 + IAI46_07510 0.82 +0.1 1,587,666 + IAI46_07510 0.82 -0.2 1,587,666 + IAI46_07510 0.82 +0.2 1,587,666 + IAI46_07510 0.82 -0.0 1,587,667 - IAI46_07510 0.82 +0.0 1,587,667 - IAI46_07510 0.82 -0.7 1,587,698 - IAI46_07510 0.86 +1.1 1,587,836 - +0.3 1,587,923 - -1.0 1,587,973 + -0.9 1,588,029 + +0.5 1,588,029 + -0.5 1,588,141 + -0.8 1,588,164 + -0.6 1,588,334 + IAI46_07515 0.15 +1.1 1,588,352 + IAI46_07515 0.16 +0.6 1,588,370 - IAI46_07515 0.17 +0.1 1,588,374 + IAI46_07515 0.18 -0.6 1,588,379 - IAI46_07515 0.18 -0.7 1,588,404 + IAI46_07515 0.20 -0.2 1,588,452 - IAI46_07515 0.24 -0.1 1,588,452 - IAI46_07515 0.24 +0.8 1,588,452 - IAI46_07515 0.24 +0.9 1,588,452 - IAI46_07515 0.24 +0.4 1,588,468 + IAI46_07515 0.25 +0.9 1,588,627 + IAI46_07515 0.37 +0.1 1,588,627 + IAI46_07515 0.37 -0.4 1,588,627 + IAI46_07515 0.37 -0.3 1,588,757 - IAI46_07515 0.47 +0.1 1,588,818 - IAI46_07515 0.52 +1.7
Or see this region's nucleotide sequence