Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_06965 and IAI46_06970 overlap by 8 nucleotides IAI46_06970 and IAI46_06975 are separated by 31 nucleotides IAI46_06975 and IAI46_06980 overlap by 4 nucleotides IAI46_06980 and IAI46_06985 are separated by 277 nucleotides
IAI46_06965: IAI46_06965 - ABC transporter ATP-binding protein, at 1,477,126 to 1,477,905
_06965
IAI46_06970: IAI46_06970 - substrate-binding domain-containing protein, at 1,477,898 to 1,478,629
_06970
IAI46_06975: IAI46_06975 - hypothetical protein, at 1,478,661 to 1,478,957
_06975
IAI46_06980: IAI46_06980 - AAA family ATPase, at 1,478,954 to 1,479,589
_06980
IAI46_06985: IAI46_06985 - HNH nuclease family protein, at 1,479,867 to 1,480,208
_06985
Position (kb)
1478
1479 Strain fitness (log2 ratio)
-2
-1
0
1 at 1477.871 kb on + strand at 1477.989 kb on + strand, within IAI46_06970 at 1477.990 kb on - strand, within IAI46_06970 at 1477.998 kb on + strand, within IAI46_06970 at 1477.998 kb on + strand, within IAI46_06970 at 1478.155 kb on - strand, within IAI46_06970 at 1478.155 kb on - strand, within IAI46_06970 at 1478.155 kb on - strand, within IAI46_06970 at 1478.158 kb on + strand, within IAI46_06970 at 1478.158 kb on + strand, within IAI46_06970 at 1478.158 kb on + strand, within IAI46_06970 at 1478.158 kb on + strand, within IAI46_06970 at 1478.158 kb on + strand, within IAI46_06970 at 1478.158 kb on + strand, within IAI46_06970 at 1478.159 kb on - strand, within IAI46_06970 at 1478.159 kb on - strand, within IAI46_06970 at 1478.162 kb on - strand, within IAI46_06970 at 1478.162 kb on - strand, within IAI46_06970 at 1478.196 kb on + strand, within IAI46_06970 at 1478.197 kb on - strand, within IAI46_06970 at 1478.259 kb on - strand, within IAI46_06970 at 1478.390 kb on + strand, within IAI46_06970 at 1478.390 kb on + strand, within IAI46_06970 at 1478.391 kb on - strand, within IAI46_06970 at 1478.438 kb on + strand, within IAI46_06970 at 1478.438 kb on + strand, within IAI46_06970 at 1478.438 kb on + strand, within IAI46_06970 at 1478.438 kb on + strand, within IAI46_06970 at 1478.439 kb on - strand, within IAI46_06970 at 1478.439 kb on - strand, within IAI46_06970 at 1478.484 kb on + strand, within IAI46_06970 at 1478.513 kb on + strand, within IAI46_06970 at 1478.514 kb on - strand, within IAI46_06970 at 1478.529 kb on + strand, within IAI46_06970 at 1478.529 kb on + strand, within IAI46_06970 at 1478.530 kb on - strand, within IAI46_06970 at 1478.608 kb on - strand at 1478.627 kb on + strand at 1478.627 kb on + strand at 1478.635 kb on + strand at 1478.636 kb on - strand at 1478.636 kb on - strand at 1478.638 kb on + strand at 1478.638 kb on + strand at 1478.638 kb on + strand at 1478.638 kb on + strand at 1478.639 kb on - strand at 1478.652 kb on - strand at 1478.659 kb on + strand at 1478.660 kb on - strand at 1478.660 kb on - strand at 1478.663 kb on - strand at 1478.839 kb on + strand, within IAI46_06975 at 1478.840 kb on - strand, within IAI46_06975 at 1478.840 kb on - strand, within IAI46_06975 at 1478.913 kb on - strand, within IAI46_06975 at 1479.052 kb on - strand, within IAI46_06980 at 1479.107 kb on + strand, within IAI46_06980 at 1479.136 kb on + strand, within IAI46_06980 at 1479.137 kb on - strand, within IAI46_06980 at 1479.174 kb on + strand, within IAI46_06980 at 1479.175 kb on - strand, within IAI46_06980 at 1479.175 kb on - strand, within IAI46_06980 at 1479.175 kb on - strand, within IAI46_06980 at 1479.194 kb on - strand, within IAI46_06980 at 1479.194 kb on - strand, within IAI46_06980 at 1479.195 kb on + strand, within IAI46_06980 at 1479.196 kb on - strand, within IAI46_06980 at 1479.345 kb on + strand, within IAI46_06980 at 1479.352 kb on - strand, within IAI46_06980 at 1479.413 kb on - strand, within IAI46_06980 at 1479.413 kb on - strand, within IAI46_06980 at 1479.446 kb on - strand, within IAI46_06980 at 1479.446 kb on - strand, within IAI46_06980 at 1479.446 kb on - strand, within IAI46_06980 at 1479.448 kb on - strand, within IAI46_06980 at 1479.520 kb on - strand, within IAI46_06980 at 1479.664 kb on + strand at 1479.669 kb on - strand at 1479.687 kb on + strand at 1479.688 kb on - strand at 1479.688 kb on - strand at 1479.688 kb on - strand at 1479.728 kb on - strand at 1479.734 kb on - strand at 1479.734 kb on - strand at 1479.741 kb on - strand at 1479.771 kb on + strand at 1479.771 kb on + strand at 1479.772 kb on - strand at 1479.826 kb on + strand at 1479.868 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 1,477,871 + -0.3 1,477,989 + IAI46_06970 0.12 -1.5 1,477,990 - IAI46_06970 0.13 -0.3 1,477,998 + IAI46_06970 0.14 +0.7 1,477,998 + IAI46_06970 0.14 +0.6 1,478,155 - IAI46_06970 0.35 +1.0 1,478,155 - IAI46_06970 0.35 +0.3 1,478,155 - IAI46_06970 0.35 +0.4 1,478,158 + IAI46_06970 0.36 +0.2 1,478,158 + IAI46_06970 0.36 +0.5 1,478,158 + IAI46_06970 0.36 -0.2 1,478,158 + IAI46_06970 0.36 -0.3 1,478,158 + IAI46_06970 0.36 +0.0 1,478,158 + IAI46_06970 0.36 -0.1 1,478,159 - IAI46_06970 0.36 -0.3 1,478,159 - IAI46_06970 0.36 -1.3 1,478,162 - IAI46_06970 0.36 +0.3 1,478,162 - IAI46_06970 0.36 +0.1 1,478,196 + IAI46_06970 0.41 +0.8 1,478,197 - IAI46_06970 0.41 +0.6 1,478,259 - IAI46_06970 0.49 +0.6 1,478,390 + IAI46_06970 0.67 -0.1 1,478,390 + IAI46_06970 0.67 +0.2 1,478,391 - IAI46_06970 0.67 +0.8 1,478,438 + IAI46_06970 0.74 -0.1 1,478,438 + IAI46_06970 0.74 +0.8 1,478,438 + IAI46_06970 0.74 -0.0 1,478,438 + IAI46_06970 0.74 +0.5 1,478,439 - IAI46_06970 0.74 +0.1 1,478,439 - IAI46_06970 0.74 +0.5 1,478,484 + IAI46_06970 0.80 -0.7 1,478,513 + IAI46_06970 0.84 -0.6 1,478,514 - IAI46_06970 0.84 +1.2 1,478,529 + IAI46_06970 0.86 +0.4 1,478,529 + IAI46_06970 0.86 +0.4 1,478,530 - IAI46_06970 0.86 -0.5 1,478,608 - +0.5 1,478,627 + +0.3 1,478,627 + +0.8 1,478,635 + +1.5 1,478,636 - -0.0 1,478,636 - -0.3 1,478,638 + +1.3 1,478,638 + +0.7 1,478,638 + +0.1 1,478,638 + -0.3 1,478,639 - +0.3 1,478,652 - +0.4 1,478,659 + -0.9 1,478,660 - +0.4 1,478,660 - +0.4 1,478,663 - -0.4 1,478,839 + IAI46_06975 0.60 +0.9 1,478,840 - IAI46_06975 0.60 +0.7 1,478,840 - IAI46_06975 0.60 -0.8 1,478,913 - IAI46_06975 0.85 +0.7 1,479,052 - IAI46_06980 0.15 +0.3 1,479,107 + IAI46_06980 0.24 +0.5 1,479,136 + IAI46_06980 0.29 +0.7 1,479,137 - IAI46_06980 0.29 +0.2 1,479,174 + IAI46_06980 0.35 +0.8 1,479,175 - IAI46_06980 0.35 +0.5 1,479,175 - IAI46_06980 0.35 -0.9 1,479,175 - IAI46_06980 0.35 -0.3 1,479,194 - IAI46_06980 0.38 -0.1 1,479,194 - IAI46_06980 0.38 +1.3 1,479,195 + IAI46_06980 0.38 +0.7 1,479,196 - IAI46_06980 0.38 +0.3 1,479,345 + IAI46_06980 0.61 +0.2 1,479,352 - IAI46_06980 0.63 +0.6 1,479,413 - IAI46_06980 0.72 -0.9 1,479,413 - IAI46_06980 0.72 -0.0 1,479,446 - IAI46_06980 0.77 +0.2 1,479,446 - IAI46_06980 0.77 +0.9 1,479,446 - IAI46_06980 0.77 +0.2 1,479,448 - IAI46_06980 0.78 +1.5 1,479,520 - IAI46_06980 0.89 +0.4 1,479,664 + -0.2 1,479,669 - +0.1 1,479,687 + +1.1 1,479,688 - +0.3 1,479,688 - +0.5 1,479,688 - +0.2 1,479,728 - -0.3 1,479,734 - +0.2 1,479,734 - -0.1 1,479,741 - -0.9 1,479,771 + +1.0 1,479,771 + -1.1 1,479,772 - -0.3 1,479,826 + -0.1 1,479,868 + -2.0
Or see this region's nucleotide sequence