Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_05370 and IAI46_05375 overlap by 4 nucleotides IAI46_05375 and IAI46_05380 are separated by 166 nucleotides IAI46_05380 and IAI46_05385 are separated by 10 nucleotides IAI46_05385 and IAI46_05390 are separated by 309 nucleotides
IAI46_05370: IAI46_05370 - 5-(carboxyamino)imidazole ribonucleotide synthase, at 1,158,680 to 1,159,747
_05370
IAI46_05375: IAI46_05375 - 5-(carboxyamino)imidazole ribonucleotide mutase, at 1,159,744 to 1,160,268
_05375
IAI46_05380: IAI46_05380 - UDP-2,3-diacylglucosamine diphosphatase, at 1,160,435 to 1,161,157
_05380
IAI46_05385: IAI46_05385 - peptidylprolyl isomerase B, at 1,161,168 to 1,161,662
_05385
IAI46_05390: IAI46_05390 - cysteine--tRNA ligase, at 1,161,972 to 1,163,357
_05390
Position (kb)
1160
1161
1162 Strain fitness (log2 ratio)
-2
-1
0
1 at 1159.631 kb on + strand, within IAI46_05370 at 1159.632 kb on - strand, within IAI46_05370 at 1159.705 kb on + strand at 1159.705 kb on + strand at 1159.705 kb on + strand at 1159.706 kb on - strand at 1159.940 kb on + strand, within IAI46_05375 at 1160.229 kb on + strand at 1160.230 kb on - strand at 1160.275 kb on - strand at 1160.291 kb on + strand at 1160.292 kb on - strand at 1160.345 kb on - strand at 1160.345 kb on - strand at 1160.345 kb on - strand at 1160.345 kb on - strand at 1160.437 kb on - strand at 1160.437 kb on - strand at 1160.437 kb on - strand at 1161.298 kb on - strand, within IAI46_05385 at 1161.675 kb on - strand at 1161.730 kb on - strand at 1161.730 kb on - strand at 1161.730 kb on - strand at 1161.734 kb on + strand at 1161.735 kb on - strand at 1161.735 kb on - strand at 1161.735 kb on - strand at 1161.735 kb on - strand at 1161.735 kb on - strand at 1161.735 kb on - strand at 1161.735 kb on - strand at 1161.744 kb on - strand at 1161.744 kb on - strand at 1161.804 kb on + strand at 1161.828 kb on + strand at 1161.880 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 1,159,631 + IAI46_05370 0.89 -0.7 1,159,632 - IAI46_05370 0.89 -0.3 1,159,705 + -1.6 1,159,705 + -2.5 1,159,705 + -2.2 1,159,706 - -1.0 1,159,940 + IAI46_05375 0.37 -1.8 1,160,229 + -1.9 1,160,230 - -0.0 1,160,275 - -1.2 1,160,291 + -1.5 1,160,292 - -1.0 1,160,345 - +0.2 1,160,345 - -1.9 1,160,345 - -0.5 1,160,345 - -0.1 1,160,437 - +0.4 1,160,437 - +0.4 1,160,437 - +0.9 1,161,298 - IAI46_05385 0.26 +0.5 1,161,675 - +1.0 1,161,730 - +0.3 1,161,730 - -1.5 1,161,730 - +0.5 1,161,734 + -0.5 1,161,735 - -0.1 1,161,735 - +0.3 1,161,735 - +0.2 1,161,735 - +0.1 1,161,735 - -1.9 1,161,735 - -0.5 1,161,735 - -0.2 1,161,744 - +0.4 1,161,744 - +0.1 1,161,804 + +0.8 1,161,828 + -0.3 1,161,880 + +0.5
Or see this region's nucleotide sequence