Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_00430 and IAI46_00435 are separated by 365 nucleotides IAI46_00435 and IAI46_00440 overlap by 1 nucleotides IAI46_00440 and IAI46_00445 are separated by 100 nucleotides
IAI46_00430: IAI46_00430 - kdo(2)-lipid A phosphoethanolamine 7''-transferase, at 96,964 to 98,658
_00430
IAI46_00435: IAI46_00435 - transcriptional regulator UhpA, at 99,024 to 99,614
_00435
IAI46_00440: IAI46_00440 - signal transduction histidine-protein kinase/phosphatase UhpB, at 99,614 to 101,149
_00440
IAI46_00445: IAI46_00445 - MFS transporter, at 101,250 to 102,581
_00445
Position (kb) 99
100
101
102 Strain fitness (log2 ratio) -2
-1
0
1 at 98.622 kb on + strand at 98.623 kb on - strand at 98.623 kb on - strand at 98.623 kb on - strand at 98.654 kb on + strand at 98.654 kb on + strand at 98.654 kb on + strand at 98.655 kb on - strand at 98.655 kb on - strand at 98.655 kb on - strand at 98.655 kb on - strand at 98.655 kb on - strand at 98.655 kb on - strand at 98.656 kb on + strand at 98.657 kb on - strand at 98.668 kb on + strand at 98.699 kb on + strand at 98.702 kb on + strand at 98.702 kb on + strand at 98.716 kb on + strand at 98.717 kb on - strand at 98.717 kb on - strand at 98.717 kb on - strand at 98.719 kb on + strand at 98.740 kb on + strand at 98.740 kb on + strand at 98.740 kb on + strand at 98.742 kb on + strand at 98.742 kb on + strand at 98.742 kb on + strand at 98.742 kb on + strand at 98.742 kb on + strand at 98.742 kb on + strand at 98.743 kb on - strand at 98.743 kb on - strand at 98.743 kb on - strand at 98.743 kb on - strand at 98.743 kb on - strand at 98.744 kb on + strand at 98.745 kb on - strand at 98.745 kb on - strand at 98.745 kb on - strand at 98.783 kb on - strand at 98.783 kb on - strand at 98.783 kb on - strand at 98.872 kb on - strand at 98.872 kb on - strand at 98.876 kb on + strand at 98.876 kb on + strand at 98.876 kb on + strand at 98.887 kb on + strand at 98.930 kb on - strand at 98.934 kb on + strand at 98.934 kb on + strand at 98.934 kb on + strand at 98.934 kb on + strand at 98.935 kb on - strand at 98.935 kb on - strand at 98.935 kb on - strand at 98.935 kb on - strand at 98.935 kb on - strand at 98.961 kb on + strand at 98.979 kb on + strand at 98.979 kb on + strand at 98.979 kb on + strand at 98.979 kb on + strand at 98.979 kb on + strand at 98.979 kb on + strand at 98.980 kb on - strand at 98.980 kb on - strand at 98.980 kb on - strand at 98.981 kb on + strand at 98.982 kb on - strand at 98.986 kb on + strand at 98.988 kb on + strand at 98.988 kb on + strand at 98.988 kb on + strand at 98.988 kb on + strand at 98.988 kb on + strand at 98.988 kb on + strand at 98.988 kb on + strand at 98.988 kb on + strand at 98.988 kb on + strand at 98.988 kb on + strand at 98.989 kb on - strand at 98.989 kb on - strand at 98.989 kb on - strand at 98.989 kb on - strand at 98.989 kb on - strand at 98.989 kb on - strand at 98.989 kb on - strand at 98.989 kb on - strand at 98.989 kb on - strand at 99.044 kb on + strand at 99.188 kb on + strand, within IAI46_00435 at 99.188 kb on + strand, within IAI46_00435 at 99.243 kb on - strand, within IAI46_00435 at 99.469 kb on + strand, within IAI46_00435 at 99.470 kb on - strand, within IAI46_00435 at 99.572 kb on + strand at 99.573 kb on - strand at 99.654 kb on - strand at 99.892 kb on + strand, within IAI46_00440 at 100.092 kb on + strand, within IAI46_00440 at 100.093 kb on - strand, within IAI46_00440 at 100.101 kb on - strand, within IAI46_00440 at 100.148 kb on - strand, within IAI46_00440 at 100.180 kb on + strand, within IAI46_00440 at 100.180 kb on + strand, within IAI46_00440 at 100.184 kb on + strand, within IAI46_00440 at 100.184 kb on + strand, within IAI46_00440 at 100.184 kb on + strand, within IAI46_00440 at 100.184 kb on + strand, within IAI46_00440 at 100.184 kb on + strand, within IAI46_00440 at 100.184 kb on + strand, within IAI46_00440 at 100.184 kb on + strand, within IAI46_00440 at 100.184 kb on + strand, within IAI46_00440 at 100.185 kb on - strand, within IAI46_00440 at 100.185 kb on - strand, within IAI46_00440 at 100.185 kb on - strand, within IAI46_00440 at 100.185 kb on - strand, within IAI46_00440 at 100.185 kb on - strand, within IAI46_00440 at 100.207 kb on + strand, within IAI46_00440 at 100.207 kb on + strand, within IAI46_00440 at 100.344 kb on + strand, within IAI46_00440 at 100.345 kb on - strand, within IAI46_00440 at 100.473 kb on + strand, within IAI46_00440 at 100.612 kb on + strand, within IAI46_00440 at 100.612 kb on + strand, within IAI46_00440 at 100.613 kb on - strand, within IAI46_00440 at 100.666 kb on + strand, within IAI46_00440 at 100.666 kb on + strand, within IAI46_00440 at 100.666 kb on + strand, within IAI46_00440 at 100.666 kb on + strand, within IAI46_00440 at 100.666 kb on + strand, within IAI46_00440 at 100.666 kb on + strand, within IAI46_00440 at 100.666 kb on + strand, within IAI46_00440 at 100.667 kb on - strand, within IAI46_00440 at 100.686 kb on - strand, within IAI46_00440 at 100.686 kb on - strand, within IAI46_00440 at 100.686 kb on - strand, within IAI46_00440 at 100.735 kb on + strand, within IAI46_00440 at 100.736 kb on - strand, within IAI46_00440 at 100.793 kb on - strand, within IAI46_00440 at 100.866 kb on - strand, within IAI46_00440 at 100.952 kb on - strand, within IAI46_00440 at 101.059 kb on + strand at 101.148 kb on - strand at 101.153 kb on + strand at 101.160 kb on + strand at 101.161 kb on - strand at 101.161 kb on - strand at 101.166 kb on + strand at 101.167 kb on - strand at 101.189 kb on - strand at 101.218 kb on - strand at 101.218 kb on - strand at 101.232 kb on + strand at 101.319 kb on + strand at 101.319 kb on + strand at 101.319 kb on + strand at 101.320 kb on - strand at 101.320 kb on - strand at 101.320 kb on - strand at 101.321 kb on + strand at 101.321 kb on + strand at 101.321 kb on + strand at 101.321 kb on + strand at 101.322 kb on - strand at 101.322 kb on - strand at 101.322 kb on - strand at 101.322 kb on - strand at 101.325 kb on + strand at 101.325 kb on + strand at 101.325 kb on + strand at 101.326 kb on - strand at 101.355 kb on + strand at 101.355 kb on + strand at 101.355 kb on + strand at 101.356 kb on - strand at 101.356 kb on - strand at 101.356 kb on - strand at 101.356 kb on - strand at 101.356 kb on - strand at 101.364 kb on + strand at 101.377 kb on - strand at 101.381 kb on + strand at 101.462 kb on + strand, within IAI46_00445 at 101.472 kb on + strand, within IAI46_00445 at 101.472 kb on + strand, within IAI46_00445 at 101.472 kb on + strand, within IAI46_00445 at 101.481 kb on + strand, within IAI46_00445 at 101.481 kb on + strand, within IAI46_00445 at 101.540 kb on + strand, within IAI46_00445 at 101.540 kb on + strand, within IAI46_00445 at 101.576 kb on + strand, within IAI46_00445 at 101.576 kb on + strand, within IAI46_00445 at 101.576 kb on + strand, within IAI46_00445 at 101.591 kb on + strand, within IAI46_00445 at 101.592 kb on - strand, within IAI46_00445 at 101.592 kb on - strand, within IAI46_00445 at 101.777 kb on + strand, within IAI46_00445 at 101.778 kb on - strand, within IAI46_00445 at 101.894 kb on + strand, within IAI46_00445 at 101.982 kb on + strand, within IAI46_00445 at 101.982 kb on + strand, within IAI46_00445 at 101.983 kb on - strand, within IAI46_00445 at 102.000 kb on + strand, within IAI46_00445 at 102.000 kb on + strand, within IAI46_00445 at 102.000 kb on + strand, within IAI46_00445 at 102.000 kb on + strand, within IAI46_00445 at 102.000 kb on + strand, within IAI46_00445 at 102.000 kb on + strand, within IAI46_00445 at 102.000 kb on + strand, within IAI46_00445 at 102.001 kb on - strand, within IAI46_00445 at 102.001 kb on - strand, within IAI46_00445 at 102.001 kb on - strand, within IAI46_00445 at 102.024 kb on + strand, within IAI46_00445 at 102.024 kb on + strand, within IAI46_00445 at 102.024 kb on + strand, within IAI46_00445 at 102.024 kb on + strand, within IAI46_00445 at 102.025 kb on - strand, within IAI46_00445 at 102.025 kb on - strand, within IAI46_00445 at 102.036 kb on + strand, within IAI46_00445 at 102.036 kb on + strand, within IAI46_00445 at 102.036 kb on + strand, within IAI46_00445 at 102.036 kb on + strand, within IAI46_00445 at 102.037 kb on - strand, within IAI46_00445 at 102.037 kb on - strand, within IAI46_00445 at 102.037 kb on - strand, within IAI46_00445 at 102.037 kb on - strand, within IAI46_00445 at 102.037 kb on - strand, within IAI46_00445 at 102.037 kb on - strand, within IAI46_00445 at 102.037 kb on - strand, within IAI46_00445 at 102.043 kb on + strand, within IAI46_00445 at 102.043 kb on + strand, within IAI46_00445 at 102.044 kb on - strand, within IAI46_00445 at 102.044 kb on - strand, within IAI46_00445 at 102.044 kb on - strand, within IAI46_00445 at 102.044 kb on - strand, within IAI46_00445 at 102.044 kb on - strand, within IAI46_00445 at 102.075 kb on + strand, within IAI46_00445 at 102.097 kb on + strand, within IAI46_00445 at 102.097 kb on - strand, within IAI46_00445
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 98,622 + +0.5 98,623 - +0.5 98,623 - -0.3 98,623 - +0.2 98,654 + +0.1 98,654 + +0.6 98,654 + +0.4 98,655 - +0.1 98,655 - +0.7 98,655 - -0.5 98,655 - +0.1 98,655 - +0.3 98,655 - -0.8 98,656 + +0.4 98,657 - +0.1 98,668 + +0.7 98,699 + +0.5 98,702 + +0.5 98,702 + +0.4 98,716 + -0.8 98,717 - +0.2 98,717 - +0.0 98,717 - -0.0 98,719 + +0.6 98,740 + +0.4 98,740 + -0.3 98,740 + +0.8 98,742 + -0.9 98,742 + +0.2 98,742 + +0.5 98,742 + +1.7 98,742 + -0.3 98,742 + +0.3 98,743 - +0.7 98,743 - -0.0 98,743 - +0.8 98,743 - +0.2 98,743 - -1.0 98,744 + +0.3 98,745 - +0.9 98,745 - -0.3 98,745 - +0.1 98,783 - -0.1 98,783 - +0.1 98,783 - +0.1 98,872 - -0.0 98,872 - -0.2 98,876 + +0.6 98,876 + +0.5 98,876 + +0.3 98,887 + +0.1 98,930 - +0.7 98,934 + -0.3 98,934 + -0.2 98,934 + +0.3 98,934 + -0.1 98,935 - +1.2 98,935 - +0.6 98,935 - -1.1 98,935 - +0.3 98,935 - +0.5 98,961 + -1.0 98,979 + -0.2 98,979 + +0.5 98,979 + -0.5 98,979 + +0.4 98,979 + -0.3 98,979 + +0.2 98,980 - +0.5 98,980 - -0.0 98,980 - +0.5 98,981 + +0.2 98,982 - +0.3 98,986 + -0.9 98,988 + +0.2 98,988 + -0.3 98,988 + +0.0 98,988 + -0.1 98,988 + -0.0 98,988 + +0.0 98,988 + +0.4 98,988 + -0.3 98,988 + +0.9 98,988 + +0.5 98,989 - +0.5 98,989 - +0.3 98,989 - +0.2 98,989 - -0.2 98,989 - +0.2 98,989 - -0.1 98,989 - +0.0 98,989 - -0.0 98,989 - -0.4 99,044 + +0.3 99,188 + IAI46_00435 0.28 -0.1 99,188 + IAI46_00435 0.28 +0.1 99,243 - IAI46_00435 0.37 +0.8 99,469 + IAI46_00435 0.75 -0.8 99,470 - IAI46_00435 0.75 -0.2 99,572 + -0.3 99,573 - +0.3 99,654 - -1.3 99,892 + IAI46_00440 0.18 -0.1 100,092 + IAI46_00440 0.31 +0.3 100,093 - IAI46_00440 0.31 +0.4 100,101 - IAI46_00440 0.32 -1.0 100,148 - IAI46_00440 0.35 +0.2 100,180 + IAI46_00440 0.37 -0.5 100,180 + IAI46_00440 0.37 -0.1 100,184 + IAI46_00440 0.37 +0.1 100,184 + IAI46_00440 0.37 -0.3 100,184 + IAI46_00440 0.37 -0.3 100,184 + IAI46_00440 0.37 -0.1 100,184 + IAI46_00440 0.37 +0.2 100,184 + IAI46_00440 0.37 +0.6 100,184 + IAI46_00440 0.37 +0.6 100,184 + IAI46_00440 0.37 +0.5 100,185 - IAI46_00440 0.37 +0.0 100,185 - IAI46_00440 0.37 +0.5 100,185 - IAI46_00440 0.37 +0.4 100,185 - IAI46_00440 0.37 -0.6 100,185 - IAI46_00440 0.37 +0.9 100,207 + IAI46_00440 0.39 -0.1 100,207 + IAI46_00440 0.39 +0.3 100,344 + IAI46_00440 0.48 +0.5 100,345 - IAI46_00440 0.48 +0.2 100,473 + IAI46_00440 0.56 +1.2 100,612 + IAI46_00440 0.65 +0.0 100,612 + IAI46_00440 0.65 +0.7 100,613 - IAI46_00440 0.65 +0.1 100,666 + IAI46_00440 0.68 +1.0 100,666 + IAI46_00440 0.68 -0.2 100,666 + IAI46_00440 0.68 +0.2 100,666 + IAI46_00440 0.68 +0.1 100,666 + IAI46_00440 0.68 +1.0 100,666 + IAI46_00440 0.68 +0.0 100,666 + IAI46_00440 0.68 -0.2 100,667 - IAI46_00440 0.69 +0.2 100,686 - IAI46_00440 0.70 +0.0 100,686 - IAI46_00440 0.70 +0.1 100,686 - IAI46_00440 0.70 +0.2 100,735 + IAI46_00440 0.73 -0.1 100,736 - IAI46_00440 0.73 -0.5 100,793 - IAI46_00440 0.77 +1.5 100,866 - IAI46_00440 0.82 -0.4 100,952 - IAI46_00440 0.87 +0.2 101,059 + -0.0 101,148 - +0.2 101,153 + -0.2 101,160 + +0.8 101,161 - +0.4 101,161 - -0.2 101,166 + +0.1 101,167 - -0.1 101,189 - +0.1 101,218 - -0.4 101,218 - +0.8 101,232 + -0.4 101,319 + +0.3 101,319 + +0.9 101,319 + +0.6 101,320 - +0.0 101,320 - +0.9 101,320 - +0.5 101,321 + +0.8 101,321 + +0.2 101,321 + -0.3 101,321 + -0.2 101,322 - +0.5 101,322 - -0.1 101,322 - -0.7 101,322 - +0.5 101,325 + -0.7 101,325 + +0.7 101,325 + +0.3 101,326 - -1.7 101,355 + -0.2 101,355 + +0.2 101,355 + +0.7 101,356 - -0.3 101,356 - +0.2 101,356 - +0.1 101,356 - +0.4 101,356 - +0.9 101,364 + +0.6 101,377 - -0.0 101,381 + +0.1 101,462 + IAI46_00445 0.16 +0.3 101,472 + IAI46_00445 0.17 +0.2 101,472 + IAI46_00445 0.17 +0.8 101,472 + IAI46_00445 0.17 -0.3 101,481 + IAI46_00445 0.17 +0.7 101,481 + IAI46_00445 0.17 +0.7 101,540 + IAI46_00445 0.22 -0.5 101,540 + IAI46_00445 0.22 +0.2 101,576 + IAI46_00445 0.24 -0.8 101,576 + IAI46_00445 0.24 -0.5 101,576 + IAI46_00445 0.24 +0.9 101,591 + IAI46_00445 0.26 +0.2 101,592 - IAI46_00445 0.26 +0.4 101,592 - IAI46_00445 0.26 -0.1 101,777 + IAI46_00445 0.40 -0.3 101,778 - IAI46_00445 0.40 +0.6 101,894 + IAI46_00445 0.48 +0.2 101,982 + IAI46_00445 0.55 +0.3 101,982 + IAI46_00445 0.55 -0.3 101,983 - IAI46_00445 0.55 +0.0 102,000 + IAI46_00445 0.56 -0.5 102,000 + IAI46_00445 0.56 -0.1 102,000 + IAI46_00445 0.56 -0.0 102,000 + IAI46_00445 0.56 -1.5 102,000 + IAI46_00445 0.56 +0.1 102,000 + IAI46_00445 0.56 -2.1 102,000 + IAI46_00445 0.56 +0.4 102,001 - IAI46_00445 0.56 -0.8 102,001 - IAI46_00445 0.56 +0.4 102,001 - IAI46_00445 0.56 -0.2 102,024 + IAI46_00445 0.58 +0.1 102,024 + IAI46_00445 0.58 +0.4 102,024 + IAI46_00445 0.58 +0.1 102,024 + IAI46_00445 0.58 +0.4 102,025 - IAI46_00445 0.58 -0.2 102,025 - IAI46_00445 0.58 +0.1 102,036 + IAI46_00445 0.59 +0.8 102,036 + IAI46_00445 0.59 +1.0 102,036 + IAI46_00445 0.59 -0.5 102,036 + IAI46_00445 0.59 +1.4 102,037 - IAI46_00445 0.59 +0.7 102,037 - IAI46_00445 0.59 -0.0 102,037 - IAI46_00445 0.59 +0.1 102,037 - IAI46_00445 0.59 +0.3 102,037 - IAI46_00445 0.59 -0.4 102,037 - IAI46_00445 0.59 -0.1 102,037 - IAI46_00445 0.59 -0.3 102,043 + IAI46_00445 0.60 +0.4 102,043 + IAI46_00445 0.60 +0.3 102,044 - IAI46_00445 0.60 +0.4 102,044 - IAI46_00445 0.60 +0.0 102,044 - IAI46_00445 0.60 +0.9 102,044 - IAI46_00445 0.60 +0.3 102,044 - IAI46_00445 0.60 -0.7 102,075 + IAI46_00445 0.62 -0.6 102,097 + IAI46_00445 0.64 -1.4 102,097 - IAI46_00445 0.64 -1.4
Or see this region's nucleotide sequence