Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03330 and PS417_03335 are separated by 185 nucleotides PS417_03335 and PS417_03340 are separated by 3 nucleotides
PS417_03330: PS417_03330 - Short chain fatty acid transporter, at 762,804 to 764,222
_03330
PS417_03335: PS417_03335 - MFS transporter, at 764,408 to 765,697
_03335
PS417_03340: PS417_03340 - gluconate transporter, at 765,701 to 767,071
_03340
Position (kb) 764
765
766 Strain fitness (log2 ratio) -2
-1
0
1 at 763.768 kb on + strand, within PS417_03330 at 763.769 kb on - strand, within PS417_03330 at 763.987 kb on + strand, within PS417_03330 at 764.236 kb on + strand at 764.236 kb on + strand at 764.236 kb on + strand at 764.237 kb on - strand at 764.237 kb on - strand at 764.237 kb on - strand at 764.238 kb on + strand at 764.238 kb on + strand at 764.238 kb on + strand at 764.238 kb on + strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.245 kb on + strand at 764.257 kb on + strand at 764.332 kb on + strand at 764.333 kb on - strand at 764.333 kb on - strand at 764.333 kb on - strand at 764.335 kb on - strand at 764.335 kb on - strand at 764.744 kb on + strand, within PS417_03335 at 764.744 kb on + strand, within PS417_03335 at 764.916 kb on - strand, within PS417_03335 at 764.981 kb on + strand, within PS417_03335 at 764.982 kb on - strand, within PS417_03335 at 765.356 kb on + strand, within PS417_03335 at 765.356 kb on + strand, within PS417_03335 at 765.537 kb on - strand, within PS417_03335 at 765.537 kb on - strand, within PS417_03335 at 765.537 kb on - strand, within PS417_03335 at 765.565 kb on + strand, within PS417_03335 at 765.566 kb on - strand, within PS417_03335 at 765.655 kb on - strand at 765.655 kb on - strand at 765.757 kb on + strand at 765.757 kb on + strand at 765.758 kb on - strand at 765.758 kb on - strand at 766.017 kb on + strand, within PS417_03340 at 766.357 kb on + strand, within PS417_03340 at 766.425 kb on - strand, within PS417_03340
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 763,768 + PS417_03330 0.68 +0.0 763,769 - PS417_03330 0.68 +0.4 763,987 + PS417_03330 0.83 -0.2 764,236 + +0.2 764,236 + +0.1 764,236 + +0.1 764,237 - +0.1 764,237 - -0.3 764,237 - -2.5 764,238 + -0.1 764,238 + +0.3 764,238 + +0.7 764,238 + -1.4 764,239 - +0.2 764,239 - -0.1 764,239 - +0.0 764,239 - -0.8 764,239 - +0.0 764,239 - -0.1 764,239 - +0.6 764,239 - +0.3 764,239 - -0.1 764,243 - -0.4 764,243 - -0.4 764,243 - -0.4 764,243 - -0.9 764,243 - -0.3 764,243 - -0.2 764,243 - +0.2 764,245 + +0.1 764,257 + +0.2 764,332 + -0.2 764,333 - +0.6 764,333 - +0.0 764,333 - -0.3 764,335 - -1.6 764,335 - +0.1 764,744 + PS417_03335 0.26 -0.3 764,744 + PS417_03335 0.26 -0.3 764,916 - PS417_03335 0.39 -0.5 764,981 + PS417_03335 0.44 +0.2 764,982 - PS417_03335 0.44 +0.3 765,356 + PS417_03335 0.73 +0.6 765,356 + PS417_03335 0.73 -0.1 765,537 - PS417_03335 0.88 -0.4 765,537 - PS417_03335 0.88 +1.3 765,537 - PS417_03335 0.88 +0.0 765,565 + PS417_03335 0.90 -0.1 765,566 - PS417_03335 0.90 -0.2 765,655 - -0.3 765,655 - -0.8 765,757 + -1.0 765,757 + -1.0 765,758 - +0.2 765,758 - +1.3 766,017 + PS417_03340 0.23 -0.1 766,357 + PS417_03340 0.48 +0.2 766,425 - PS417_03340 0.53 +0.1
Or see this region's nucleotide sequence