Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01775 and PS417_01780 are separated by 103 nucleotides PS417_01780 and PS417_01785 overlap by 4 nucleotides PS417_01785 and PS417_01790 are separated by 266 nucleotides
PS417_01775: PS417_01775 - lipase, at 394,841 to 395,770
_01775
PS417_01780: PS417_01780 - proline iminopeptidase, at 395,874 to 396,845
_01780
PS417_01785: PS417_01785 - D-tyrosyl-tRNA(Tyr) deacylase, at 396,842 to 397,279
_01785
PS417_01790: PS417_01790 - glucan biosynthesis protein G, at 397,546 to 399,282
_01790
Position (kb) 395
396
397 Strain fitness (log2 ratio) -1
0
1
2 at 394.935 kb on - strand, within PS417_01775 at 394.935 kb on - strand, within PS417_01775 at 395.025 kb on - strand, within PS417_01775 at 395.072 kb on + strand, within PS417_01775 at 395.072 kb on + strand, within PS417_01775 at 395.073 kb on - strand, within PS417_01775 at 395.073 kb on - strand, within PS417_01775 at 395.073 kb on - strand, within PS417_01775 at 395.073 kb on - strand, within PS417_01775 at 395.073 kb on - strand, within PS417_01775 at 395.073 kb on - strand, within PS417_01775 at 395.075 kb on - strand, within PS417_01775 at 395.076 kb on + strand, within PS417_01775 at 395.076 kb on + strand, within PS417_01775 at 395.077 kb on - strand, within PS417_01775 at 395.376 kb on + strand, within PS417_01775 at 395.376 kb on + strand, within PS417_01775 at 395.377 kb on - strand, within PS417_01775 at 395.471 kb on + strand, within PS417_01775 at 395.472 kb on - strand, within PS417_01775 at 395.472 kb on - strand, within PS417_01775 at 395.483 kb on + strand at 395.609 kb on + strand, within PS417_01775 at 395.726 kb on + strand at 395.739 kb on - strand at 395.778 kb on - strand at 395.806 kb on + strand at 395.807 kb on - strand at 395.807 kb on - strand at 395.807 kb on - strand at 395.807 kb on - strand at 395.808 kb on + strand at 395.947 kb on - strand at 395.987 kb on - strand, within PS417_01780 at 396.357 kb on + strand, within PS417_01780 at 396.358 kb on - strand, within PS417_01780 at 396.358 kb on - strand, within PS417_01780 at 396.570 kb on + strand, within PS417_01780 at 396.570 kb on + strand, within PS417_01780 at 396.570 kb on + strand, within PS417_01780 at 396.668 kb on + strand, within PS417_01780 at 396.669 kb on - strand, within PS417_01780 at 396.979 kb on - strand, within PS417_01785 at 396.995 kb on + strand, within PS417_01785 at 397.174 kb on - strand at 397.299 kb on + strand at 397.332 kb on - strand at 397.368 kb on + strand at 397.372 kb on + strand at 397.372 kb on + strand at 397.417 kb on + strand at 397.421 kb on + strand at 397.422 kb on - strand at 397.495 kb on + strand at 397.495 kb on + strand at 397.497 kb on + strand at 397.497 kb on + strand at 397.497 kb on + strand at 397.497 kb on + strand at 397.497 kb on + strand at 397.497 kb on + strand at 397.497 kb on + strand at 397.497 kb on + strand at 397.497 kb on + strand at 397.497 kb on + strand at 397.497 kb on + strand at 397.497 kb on + strand at 397.497 kb on + strand at 397.498 kb on - strand at 397.498 kb on - strand at 397.498 kb on - strand at 397.498 kb on - strand at 397.498 kb on - strand at 397.498 kb on - strand at 397.498 kb on - strand at 397.498 kb on - strand at 397.498 kb on - strand at 397.498 kb on - strand at 397.498 kb on - strand at 397.498 kb on - strand at 397.498 kb on - strand at 397.498 kb on - strand at 397.498 kb on - strand at 397.498 kb on - strand at 397.502 kb on - strand at 397.554 kb on + strand at 397.708 kb on + strand at 397.766 kb on - strand, within PS417_01790
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 394,935 - PS417_01775 0.10 -1.4 394,935 - PS417_01775 0.10 +0.1 395,025 - PS417_01775 0.20 -0.4 395,072 + PS417_01775 0.25 -0.9 395,072 + PS417_01775 0.25 +0.1 395,073 - PS417_01775 0.25 +1.5 395,073 - PS417_01775 0.25 +0.2 395,073 - PS417_01775 0.25 -0.2 395,073 - PS417_01775 0.25 +1.5 395,073 - PS417_01775 0.25 -0.6 395,073 - PS417_01775 0.25 +0.1 395,075 - PS417_01775 0.25 -0.4 395,076 + PS417_01775 0.25 +1.1 395,076 + PS417_01775 0.25 -1.2 395,077 - PS417_01775 0.25 +0.5 395,376 + PS417_01775 0.58 +0.2 395,376 + PS417_01775 0.58 -0.4 395,377 - PS417_01775 0.58 -0.3 395,471 + PS417_01775 0.68 +0.8 395,472 - PS417_01775 0.68 +0.0 395,472 - PS417_01775 0.68 +0.3 395,483 + +0.5 395,609 + PS417_01775 0.83 -0.0 395,726 + +0.8 395,739 - +0.3 395,778 - +0.4 395,806 + +0.6 395,807 - +2.1 395,807 - -0.3 395,807 - +0.0 395,807 - -1.5 395,808 + +0.1 395,947 - +0.1 395,987 - PS417_01780 0.12 -0.6 396,357 + PS417_01780 0.50 -0.1 396,358 - PS417_01780 0.50 +0.0 396,358 - PS417_01780 0.50 +0.6 396,570 + PS417_01780 0.72 +0.2 396,570 + PS417_01780 0.72 -0.2 396,570 + PS417_01780 0.72 -0.7 396,668 + PS417_01780 0.82 +0.7 396,669 - PS417_01780 0.82 +0.1 396,979 - PS417_01785 0.31 +1.0 396,995 + PS417_01785 0.35 +0.9 397,174 - +0.5 397,299 + +0.2 397,332 - +1.5 397,368 + +1.5 397,372 + -0.8 397,372 + +0.0 397,417 + +0.5 397,421 + +0.0 397,422 - +0.7 397,495 + -0.2 397,495 + +0.2 397,497 + +1.0 397,497 + -0.1 397,497 + +0.1 397,497 + -0.1 397,497 + -0.7 397,497 + +0.3 397,497 + +0.5 397,497 + -0.4 397,497 + -0.0 397,497 + -0.0 397,497 + +0.0 397,497 + +0.4 397,497 + -0.1 397,498 - -0.1 397,498 - +0.4 397,498 - -0.5 397,498 - +0.4 397,498 - -0.6 397,498 - +0.2 397,498 - +0.2 397,498 - +0.9 397,498 - +0.8 397,498 - +0.3 397,498 - +0.4 397,498 - +0.3 397,498 - +0.8 397,498 - +0.3 397,498 - -0.2 397,498 - -0.1 397,502 - +0.8 397,554 + +0.5 397,708 + +0.6 397,766 - PS417_01790 0.13 -0.1
Or see this region's nucleotide sequence