Experiment: m.b. perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4657 and Echvi_4658 are separated by 44 nucleotides Echvi_4658 and Echvi_4659 are separated by 42 nucleotides Echvi_4659 and Echvi_4660 overlap by 60 nucleotides Echvi_4660 and Echvi_4661 are separated by 181 nucleotides
Echvi_4657: Echvi_4657 - Signal transduction histidine kinase, at 5,575,628 to 5,578,177
_4657
Echvi_4658: Echvi_4658 - hypothetical protein, at 5,578,222 to 5,578,863
_4658
Echvi_4659: Echvi_4659 - hypothetical protein, at 5,578,906 to 5,579,052
_4659
Echvi_4660: Echvi_4660 - cystathionine beta-synthase, at 5,578,993 to 5,580,363
_4660
Echvi_4661: Echvi_4661 - aspartate carbamoyltransferase, at 5,580,545 to 5,581,468
_4661
Position (kb)
5578
5579
5580
5581 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5578.069 kb on + strand at 5578.081 kb on - strand at 5578.081 kb on - strand at 5578.095 kb on - strand at 5578.111 kb on + strand at 5578.123 kb on + strand at 5578.123 kb on + strand at 5578.124 kb on - strand at 5578.124 kb on - strand at 5578.130 kb on + strand at 5578.223 kb on + strand at 5578.249 kb on + strand at 5578.250 kb on - strand at 5578.281 kb on - strand at 5578.281 kb on - strand at 5578.315 kb on + strand, within Echvi_4658 at 5578.316 kb on - strand, within Echvi_4658 at 5578.344 kb on + strand, within Echvi_4658 at 5578.415 kb on + strand, within Echvi_4658 at 5578.513 kb on + strand, within Echvi_4658 at 5578.569 kb on + strand, within Echvi_4658 at 5578.571 kb on + strand, within Echvi_4658 at 5578.571 kb on + strand, within Echvi_4658 at 5578.571 kb on + strand, within Echvi_4658 at 5578.571 kb on + strand, within Echvi_4658 at 5578.571 kb on + strand, within Echvi_4658 at 5578.571 kb on + strand, within Echvi_4658 at 5578.571 kb on + strand, within Echvi_4658 at 5578.571 kb on + strand, within Echvi_4658 at 5578.571 kb on + strand, within Echvi_4658 at 5578.572 kb on - strand, within Echvi_4658 at 5578.572 kb on - strand, within Echvi_4658 at 5578.572 kb on - strand, within Echvi_4658 at 5578.572 kb on - strand, within Echvi_4658 at 5578.572 kb on - strand, within Echvi_4658 at 5578.572 kb on - strand, within Echvi_4658 at 5578.574 kb on + strand, within Echvi_4658 at 5578.574 kb on + strand, within Echvi_4658 at 5578.575 kb on - strand, within Echvi_4658 at 5578.575 kb on - strand, within Echvi_4658 at 5578.578 kb on + strand, within Echvi_4658 at 5578.579 kb on - strand, within Echvi_4658 at 5578.599 kb on + strand, within Echvi_4658 at 5578.702 kb on - strand, within Echvi_4658 at 5578.747 kb on - strand, within Echvi_4658 at 5578.748 kb on + strand, within Echvi_4658 at 5578.795 kb on + strand, within Echvi_4658 at 5578.823 kb on + strand at 5578.824 kb on - strand at 5578.852 kb on + strand at 5578.852 kb on + strand at 5578.864 kb on - strand at 5578.878 kb on - strand at 5578.905 kb on - strand at 5578.919 kb on - strand at 5578.925 kb on - strand, within Echvi_4659 at 5578.925 kb on - strand, within Echvi_4659 at 5578.938 kb on + strand, within Echvi_4659 at 5578.939 kb on - strand, within Echvi_4659 at 5578.960 kb on - strand, within Echvi_4659 at 5578.965 kb on + strand, within Echvi_4659 at 5578.965 kb on + strand, within Echvi_4659 at 5578.995 kb on - strand at 5578.995 kb on - strand at 5579.050 kb on + strand at 5579.050 kb on + strand at 5579.050 kb on + strand at 5579.050 kb on + strand at 5579.050 kb on + strand at 5579.051 kb on - strand at 5579.051 kb on - strand at 5579.051 kb on - strand at 5579.051 kb on - strand at 5579.112 kb on + strand at 5579.424 kb on - strand, within Echvi_4660 at 5579.424 kb on - strand, within Echvi_4660 at 5579.475 kb on + strand, within Echvi_4660 at 5579.488 kb on + strand, within Echvi_4660 at 5579.687 kb on + strand, within Echvi_4660 at 5579.687 kb on + strand, within Echvi_4660 at 5579.688 kb on - strand, within Echvi_4660 at 5579.724 kb on - strand, within Echvi_4660 at 5579.724 kb on - strand, within Echvi_4660 at 5579.744 kb on + strand, within Echvi_4660 at 5579.744 kb on + strand, within Echvi_4660 at 5579.744 kb on + strand, within Echvi_4660 at 5579.744 kb on + strand, within Echvi_4660 at 5579.745 kb on - strand, within Echvi_4660 at 5579.745 kb on - strand, within Echvi_4660 at 5579.793 kb on - strand, within Echvi_4660 at 5579.793 kb on - strand, within Echvi_4660 at 5579.894 kb on + strand, within Echvi_4660 at 5579.895 kb on - strand, within Echvi_4660 at 5579.895 kb on - strand, within Echvi_4660 at 5579.981 kb on + strand, within Echvi_4660 at 5579.982 kb on - strand, within Echvi_4660 at 5580.015 kb on + strand, within Echvi_4660 at 5580.058 kb on + strand, within Echvi_4660 at 5580.164 kb on - strand, within Echvi_4660 at 5580.164 kb on - strand, within Echvi_4660 at 5580.164 kb on - strand, within Echvi_4660 at 5580.184 kb on + strand, within Echvi_4660 at 5580.261 kb on - strand at 5580.265 kb on + strand at 5580.275 kb on + strand at 5580.311 kb on - strand at 5580.356 kb on + strand at 5580.357 kb on - strand at 5580.357 kb on - strand at 5580.358 kb on + strand at 5580.368 kb on - strand at 5580.377 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 75 mM remove 5,578,069 + +0.3 5,578,081 - -1.3 5,578,081 - -0.3 5,578,095 - +0.5 5,578,111 + +0.7 5,578,123 + -1.7 5,578,123 + +0.6 5,578,124 - -0.2 5,578,124 - +0.1 5,578,130 + -0.6 5,578,223 + +0.3 5,578,249 + +0.2 5,578,250 - +0.8 5,578,281 - -0.5 5,578,281 - -1.6 5,578,315 + Echvi_4658 0.14 -0.9 5,578,316 - Echvi_4658 0.15 -0.5 5,578,344 + Echvi_4658 0.19 +0.2 5,578,415 + Echvi_4658 0.30 -0.8 5,578,513 + Echvi_4658 0.45 -0.0 5,578,569 + Echvi_4658 0.54 -0.9 5,578,571 + Echvi_4658 0.54 +1.6 5,578,571 + Echvi_4658 0.54 +0.4 5,578,571 + Echvi_4658 0.54 -0.5 5,578,571 + Echvi_4658 0.54 +0.1 5,578,571 + Echvi_4658 0.54 +1.1 5,578,571 + Echvi_4658 0.54 -0.7 5,578,571 + Echvi_4658 0.54 -0.8 5,578,571 + Echvi_4658 0.54 -0.9 5,578,571 + Echvi_4658 0.54 +1.1 5,578,572 - Echvi_4658 0.55 -1.3 5,578,572 - Echvi_4658 0.55 +0.9 5,578,572 - Echvi_4658 0.55 -0.1 5,578,572 - Echvi_4658 0.55 -0.7 5,578,572 - Echvi_4658 0.55 -1.5 5,578,572 - Echvi_4658 0.55 +0.2 5,578,574 + Echvi_4658 0.55 -0.3 5,578,574 + Echvi_4658 0.55 -0.7 5,578,575 - Echvi_4658 0.55 +0.6 5,578,575 - Echvi_4658 0.55 +0.4 5,578,578 + Echvi_4658 0.55 -0.9 5,578,579 - Echvi_4658 0.56 -0.2 5,578,599 + Echvi_4658 0.59 +0.8 5,578,702 - Echvi_4658 0.75 -0.2 5,578,747 - Echvi_4658 0.82 +0.5 5,578,748 + Echvi_4658 0.82 -0.9 5,578,795 + Echvi_4658 0.89 +0.5 5,578,823 + +0.2 5,578,824 - -0.4 5,578,852 + -0.5 5,578,852 + -0.2 5,578,864 - -0.2 5,578,878 - -0.0 5,578,905 - -0.8 5,578,919 - -0.5 5,578,925 - Echvi_4659 0.13 +0.6 5,578,925 - Echvi_4659 0.13 -0.4 5,578,938 + Echvi_4659 0.22 +0.2 5,578,939 - Echvi_4659 0.22 +0.8 5,578,960 - Echvi_4659 0.37 -0.7 5,578,965 + Echvi_4659 0.40 -0.7 5,578,965 + Echvi_4659 0.40 -0.2 5,578,995 - -1.7 5,578,995 - -0.5 5,579,050 + -2.2 5,579,050 + -0.2 5,579,050 + +0.3 5,579,050 + -1.8 5,579,050 + -0.9 5,579,051 - -0.7 5,579,051 - -0.5 5,579,051 - -1.6 5,579,051 - -1.2 5,579,112 + -1.1 5,579,424 - Echvi_4660 0.31 -0.1 5,579,424 - Echvi_4660 0.31 -1.8 5,579,475 + Echvi_4660 0.35 -0.6 5,579,488 + Echvi_4660 0.36 -0.0 5,579,687 + Echvi_4660 0.51 -1.8 5,579,687 + Echvi_4660 0.51 -1.9 5,579,688 - Echvi_4660 0.51 -1.7 5,579,724 - Echvi_4660 0.53 +1.2 5,579,724 - Echvi_4660 0.53 -1.6 5,579,744 + Echvi_4660 0.55 -1.2 5,579,744 + Echvi_4660 0.55 -0.7 5,579,744 + Echvi_4660 0.55 +0.1 5,579,744 + Echvi_4660 0.55 +0.6 5,579,745 - Echvi_4660 0.55 +0.7 5,579,745 - Echvi_4660 0.55 -1.3 5,579,793 - Echvi_4660 0.58 -0.2 5,579,793 - Echvi_4660 0.58 +0.1 5,579,894 + Echvi_4660 0.66 -0.8 5,579,895 - Echvi_4660 0.66 -0.5 5,579,895 - Echvi_4660 0.66 +0.2 5,579,981 + Echvi_4660 0.72 -0.6 5,579,982 - Echvi_4660 0.72 +0.1 5,580,015 + Echvi_4660 0.75 +0.3 5,580,058 + Echvi_4660 0.78 -2.0 5,580,164 - Echvi_4660 0.85 -1.1 5,580,164 - Echvi_4660 0.85 +0.4 5,580,164 - Echvi_4660 0.85 -0.9 5,580,184 + Echvi_4660 0.87 -0.6 5,580,261 - +0.8 5,580,265 + -0.6 5,580,275 + -0.4 5,580,311 - -0.6 5,580,356 + +0.2 5,580,357 - +0.9 5,580,357 - -1.8 5,580,358 + -1.2 5,580,368 - -0.1 5,580,377 - +2.0
Or see this region's nucleotide sequence