Experiment: m.b. perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4129 and Echvi_4130 are separated by 290 nucleotides Echvi_4130 and Echvi_4131 are separated by 26 nucleotides Echvi_4131 and Echvi_4132 are separated by 6 nucleotides
Echvi_4129: Echvi_4129 - Putative multicopper oxidases, at 4,944,668 to 4,947,031
_4129
Echvi_4130: Echvi_4130 - hypothetical protein, at 4,947,322 to 4,948,083
_4130
Echvi_4131: Echvi_4131 - Predicted membrane protein, at 4,948,110 to 4,948,565
_4131
Echvi_4132: Echvi_4132 - Protein of unknown function (DUF3347)., at 4,948,572 to 4,949,102
_4132
Position (kb)
4947
4948
4949 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4946.323 kb on + strand, within Echvi_4129 at 4946.323 kb on + strand, within Echvi_4129 at 4946.324 kb on - strand, within Echvi_4129 at 4946.324 kb on - strand, within Echvi_4129 at 4946.331 kb on + strand, within Echvi_4129 at 4946.331 kb on + strand, within Echvi_4129 at 4946.332 kb on - strand, within Echvi_4129 at 4946.416 kb on + strand, within Echvi_4129 at 4946.449 kb on - strand, within Echvi_4129 at 4946.481 kb on - strand, within Echvi_4129 at 4946.608 kb on + strand, within Echvi_4129 at 4946.620 kb on - strand, within Echvi_4129 at 4946.625 kb on + strand, within Echvi_4129 at 4946.625 kb on + strand, within Echvi_4129 at 4946.625 kb on + strand, within Echvi_4129 at 4946.625 kb on + strand, within Echvi_4129 at 4946.625 kb on + strand, within Echvi_4129 at 4946.625 kb on + strand, within Echvi_4129 at 4946.626 kb on - strand, within Echvi_4129 at 4946.626 kb on - strand, within Echvi_4129 at 4946.626 kb on - strand, within Echvi_4129 at 4946.698 kb on - strand, within Echvi_4129 at 4946.698 kb on - strand, within Echvi_4129 at 4946.791 kb on - strand, within Echvi_4129 at 4946.791 kb on - strand, within Echvi_4129 at 4946.804 kb on - strand at 4946.811 kb on - strand at 4946.869 kb on + strand at 4946.870 kb on - strand at 4946.873 kb on + strand at 4946.899 kb on + strand at 4946.900 kb on - strand at 4946.902 kb on - strand at 4946.902 kb on - strand at 4947.001 kb on + strand at 4947.004 kb on + strand at 4947.025 kb on + strand at 4947.025 kb on + strand at 4947.045 kb on + strand at 4947.045 kb on + strand at 4947.076 kb on + strand at 4947.083 kb on - strand at 4947.083 kb on - strand at 4947.083 kb on - strand at 4947.107 kb on - strand at 4947.123 kb on - strand at 4947.126 kb on - strand at 4947.130 kb on + strand at 4947.131 kb on - strand at 4947.133 kb on + strand at 4947.135 kb on + strand at 4947.135 kb on + strand at 4947.136 kb on - strand at 4947.143 kb on + strand at 4947.148 kb on - strand at 4947.163 kb on + strand at 4947.163 kb on + strand at 4947.164 kb on - strand at 4947.296 kb on + strand at 4947.296 kb on + strand at 4947.297 kb on - strand at 4947.297 kb on - strand at 4947.318 kb on + strand at 4947.319 kb on - strand at 4947.319 kb on - strand at 4947.452 kb on + strand, within Echvi_4130 at 4947.452 kb on + strand, within Echvi_4130 at 4947.453 kb on - strand, within Echvi_4130 at 4947.453 kb on - strand, within Echvi_4130 at 4947.453 kb on - strand, within Echvi_4130 at 4947.583 kb on + strand, within Echvi_4130 at 4947.583 kb on + strand, within Echvi_4130 at 4947.583 kb on + strand, within Echvi_4130 at 4947.584 kb on - strand, within Echvi_4130 at 4947.584 kb on - strand, within Echvi_4130 at 4947.584 kb on - strand, within Echvi_4130 at 4947.584 kb on - strand, within Echvi_4130 at 4947.606 kb on + strand, within Echvi_4130 at 4947.625 kb on + strand, within Echvi_4130 at 4947.625 kb on + strand, within Echvi_4130 at 4947.626 kb on - strand, within Echvi_4130 at 4947.639 kb on + strand, within Echvi_4130 at 4947.734 kb on - strand, within Echvi_4130 at 4947.802 kb on - strand, within Echvi_4130 at 4947.820 kb on + strand, within Echvi_4130 at 4947.821 kb on - strand, within Echvi_4130 at 4947.821 kb on - strand, within Echvi_4130 at 4947.822 kb on + strand, within Echvi_4130 at 4947.858 kb on + strand, within Echvi_4130 at 4947.858 kb on + strand, within Echvi_4130 at 4947.858 kb on + strand, within Echvi_4130 at 4947.900 kb on + strand, within Echvi_4130 at 4948.024 kb on - strand at 4948.072 kb on - strand at 4948.072 kb on - strand at 4948.078 kb on - strand at 4948.078 kb on - strand at 4948.132 kb on + strand at 4948.136 kb on + strand at 4948.136 kb on + strand at 4948.136 kb on + strand at 4948.136 kb on + strand at 4948.136 kb on + strand at 4948.136 kb on + strand at 4948.136 kb on + strand at 4948.136 kb on + strand at 4948.136 kb on + strand at 4948.136 kb on + strand at 4948.136 kb on + strand at 4948.136 kb on + strand at 4948.136 kb on + strand at 4948.136 kb on + strand at 4948.178 kb on + strand, within Echvi_4131 at 4948.295 kb on + strand, within Echvi_4131 at 4948.295 kb on + strand, within Echvi_4131 at 4948.296 kb on - strand, within Echvi_4131 at 4948.329 kb on + strand, within Echvi_4131 at 4948.347 kb on + strand, within Echvi_4131 at 4948.358 kb on + strand, within Echvi_4131 at 4948.358 kb on + strand, within Echvi_4131 at 4948.359 kb on - strand, within Echvi_4131 at 4948.362 kb on + strand, within Echvi_4131 at 4948.363 kb on - strand, within Echvi_4131 at 4948.363 kb on - strand, within Echvi_4131 at 4948.380 kb on + strand, within Echvi_4131 at 4948.385 kb on - strand, within Echvi_4131 at 4948.412 kb on + strand, within Echvi_4131 at 4948.415 kb on + strand, within Echvi_4131 at 4948.415 kb on + strand, within Echvi_4131 at 4948.416 kb on - strand, within Echvi_4131 at 4948.417 kb on + strand, within Echvi_4131 at 4948.417 kb on + strand, within Echvi_4131 at 4948.417 kb on + strand, within Echvi_4131 at 4948.418 kb on - strand, within Echvi_4131 at 4948.418 kb on - strand, within Echvi_4131 at 4948.418 kb on - strand, within Echvi_4131 at 4948.419 kb on + strand, within Echvi_4131 at 4948.433 kb on + strand, within Echvi_4131 at 4948.434 kb on - strand, within Echvi_4131 at 4948.504 kb on - strand, within Echvi_4131 at 4948.565 kb on + strand at 4948.574 kb on - strand at 4948.653 kb on + strand, within Echvi_4132 at 4948.661 kb on - strand, within Echvi_4132 at 4948.704 kb on + strand, within Echvi_4132 at 4948.704 kb on + strand, within Echvi_4132 at 4948.704 kb on + strand, within Echvi_4132 at 4948.704 kb on + strand, within Echvi_4132 at 4948.704 kb on + strand, within Echvi_4132 at 4948.704 kb on + strand, within Echvi_4132 at 4948.705 kb on - strand, within Echvi_4132 at 4948.705 kb on - strand, within Echvi_4132 at 4948.705 kb on - strand, within Echvi_4132 at 4948.846 kb on - strand, within Echvi_4132 at 4948.854 kb on + strand, within Echvi_4132 at 4948.854 kb on + strand, within Echvi_4132 at 4948.865 kb on + strand, within Echvi_4132 at 4948.908 kb on + strand, within Echvi_4132 at 4948.911 kb on + strand, within Echvi_4132 at 4948.911 kb on + strand, within Echvi_4132 at 4948.911 kb on + strand, within Echvi_4132 at 4948.912 kb on - strand, within Echvi_4132 at 4948.929 kb on + strand, within Echvi_4132 at 4948.931 kb on + strand, within Echvi_4132 at 4948.931 kb on + strand, within Echvi_4132 at 4948.931 kb on + strand, within Echvi_4132 at 4948.931 kb on + strand, within Echvi_4132 at 4948.931 kb on + strand, within Echvi_4132 at 4948.931 kb on + strand, within Echvi_4132 at 4948.931 kb on + strand, within Echvi_4132 at 4948.931 kb on + strand, within Echvi_4132 at 4948.931 kb on + strand, within Echvi_4132 at 4948.932 kb on - strand, within Echvi_4132 at 4948.932 kb on - strand, within Echvi_4132 at 4948.932 kb on - strand, within Echvi_4132 at 4948.933 kb on + strand, within Echvi_4132 at 4948.934 kb on - strand, within Echvi_4132 at 4948.934 kb on - strand, within Echvi_4132 at 4948.942 kb on + strand, within Echvi_4132 at 4948.942 kb on + strand, within Echvi_4132 at 4948.943 kb on - strand, within Echvi_4132 at 4948.943 kb on - strand, within Echvi_4132 at 4948.943 kb on - strand, within Echvi_4132 at 4948.943 kb on - strand, within Echvi_4132 at 4948.943 kb on - strand, within Echvi_4132 at 4948.943 kb on - strand, within Echvi_4132 at 4948.981 kb on - strand, within Echvi_4132 at 4948.981 kb on - strand, within Echvi_4132 at 4948.981 kb on - strand, within Echvi_4132
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 75 mM remove 4,946,323 + Echvi_4129 0.70 -0.3 4,946,323 + Echvi_4129 0.70 +0.5 4,946,324 - Echvi_4129 0.70 -0.7 4,946,324 - Echvi_4129 0.70 -1.0 4,946,331 + Echvi_4129 0.70 -0.1 4,946,331 + Echvi_4129 0.70 +0.6 4,946,332 - Echvi_4129 0.70 -0.4 4,946,416 + Echvi_4129 0.74 -2.2 4,946,449 - Echvi_4129 0.75 -0.7 4,946,481 - Echvi_4129 0.77 +0.7 4,946,608 + Echvi_4129 0.82 +0.3 4,946,620 - Echvi_4129 0.83 -0.2 4,946,625 + Echvi_4129 0.83 +0.4 4,946,625 + Echvi_4129 0.83 -0.8 4,946,625 + Echvi_4129 0.83 +0.0 4,946,625 + Echvi_4129 0.83 -0.1 4,946,625 + Echvi_4129 0.83 -0.0 4,946,625 + Echvi_4129 0.83 +0.1 4,946,626 - Echvi_4129 0.83 +0.3 4,946,626 - Echvi_4129 0.83 -2.8 4,946,626 - Echvi_4129 0.83 +0.2 4,946,698 - Echvi_4129 0.86 +0.6 4,946,698 - Echvi_4129 0.86 +0.6 4,946,791 - Echvi_4129 0.90 +0.0 4,946,791 - Echvi_4129 0.90 -0.2 4,946,804 - +0.5 4,946,811 - -0.4 4,946,869 + +0.3 4,946,870 - -0.7 4,946,873 + -0.3 4,946,899 + +0.3 4,946,900 - -1.1 4,946,902 - -0.4 4,946,902 - -1.5 4,947,001 + +0.8 4,947,004 + -1.1 4,947,025 + -0.8 4,947,025 + +1.5 4,947,045 + +1.4 4,947,045 + -0.3 4,947,076 + -0.0 4,947,083 - -0.9 4,947,083 - +0.6 4,947,083 - -1.1 4,947,107 - -0.8 4,947,123 - -0.8 4,947,126 - +0.0 4,947,130 + -1.4 4,947,131 - -1.1 4,947,133 + +0.2 4,947,135 + -1.0 4,947,135 + +1.9 4,947,136 - +0.0 4,947,143 + -1.2 4,947,148 - -1.7 4,947,163 + -0.3 4,947,163 + -0.1 4,947,164 - -0.5 4,947,296 + +1.0 4,947,296 + -0.6 4,947,297 - -0.2 4,947,297 - -0.6 4,947,318 + -0.4 4,947,319 - -0.5 4,947,319 - -0.6 4,947,452 + Echvi_4130 0.17 -0.5 4,947,452 + Echvi_4130 0.17 -1.5 4,947,453 - Echvi_4130 0.17 -1.0 4,947,453 - Echvi_4130 0.17 -0.7 4,947,453 - Echvi_4130 0.17 +0.7 4,947,583 + Echvi_4130 0.34 +0.0 4,947,583 + Echvi_4130 0.34 -1.6 4,947,583 + Echvi_4130 0.34 -0.6 4,947,584 - Echvi_4130 0.34 -0.2 4,947,584 - Echvi_4130 0.34 -0.1 4,947,584 - Echvi_4130 0.34 -0.8 4,947,584 - Echvi_4130 0.34 +0.0 4,947,606 + Echvi_4130 0.37 -0.6 4,947,625 + Echvi_4130 0.40 -0.2 4,947,625 + Echvi_4130 0.40 +0.4 4,947,626 - Echvi_4130 0.40 -1.1 4,947,639 + Echvi_4130 0.42 -1.4 4,947,734 - Echvi_4130 0.54 -0.7 4,947,802 - Echvi_4130 0.63 -0.8 4,947,820 + Echvi_4130 0.65 -0.8 4,947,821 - Echvi_4130 0.65 -0.5 4,947,821 - Echvi_4130 0.65 -0.2 4,947,822 + Echvi_4130 0.66 -0.6 4,947,858 + Echvi_4130 0.70 -0.7 4,947,858 + Echvi_4130 0.70 +0.1 4,947,858 + Echvi_4130 0.70 -0.2 4,947,900 + Echvi_4130 0.76 -1.0 4,948,024 - -0.5 4,948,072 - -0.4 4,948,072 - +1.0 4,948,078 - -1.0 4,948,078 - -0.3 4,948,132 + +0.4 4,948,136 + -0.8 4,948,136 + -0.7 4,948,136 + -0.4 4,948,136 + -0.8 4,948,136 + +0.8 4,948,136 + +0.2 4,948,136 + -0.7 4,948,136 + +0.8 4,948,136 + +1.0 4,948,136 + +0.2 4,948,136 + +0.2 4,948,136 + +1.4 4,948,136 + -0.6 4,948,136 + -0.9 4,948,178 + Echvi_4131 0.15 +0.8 4,948,295 + Echvi_4131 0.41 -0.3 4,948,295 + Echvi_4131 0.41 -1.3 4,948,296 - Echvi_4131 0.41 +0.5 4,948,329 + Echvi_4131 0.48 -1.0 4,948,347 + Echvi_4131 0.52 +0.1 4,948,358 + Echvi_4131 0.54 +1.2 4,948,358 + Echvi_4131 0.54 +0.2 4,948,359 - Echvi_4131 0.55 -0.7 4,948,362 + Echvi_4131 0.55 +0.1 4,948,363 - Echvi_4131 0.55 +2.0 4,948,363 - Echvi_4131 0.55 -1.6 4,948,380 + Echvi_4131 0.59 -2.0 4,948,385 - Echvi_4131 0.60 +0.1 4,948,412 + Echvi_4131 0.66 +0.6 4,948,415 + Echvi_4131 0.67 +0.7 4,948,415 + Echvi_4131 0.67 -0.7 4,948,416 - Echvi_4131 0.67 -1.1 4,948,417 + Echvi_4131 0.67 -0.0 4,948,417 + Echvi_4131 0.67 +0.2 4,948,417 + Echvi_4131 0.67 -1.3 4,948,418 - Echvi_4131 0.68 -0.2 4,948,418 - Echvi_4131 0.68 +1.1 4,948,418 - Echvi_4131 0.68 -0.6 4,948,419 + Echvi_4131 0.68 -0.4 4,948,433 + Echvi_4131 0.71 +0.7 4,948,434 - Echvi_4131 0.71 -1.2 4,948,504 - Echvi_4131 0.86 -1.6 4,948,565 + +0.1 4,948,574 - -1.1 4,948,653 + Echvi_4132 0.15 -0.5 4,948,661 - Echvi_4132 0.17 +0.5 4,948,704 + Echvi_4132 0.25 -0.4 4,948,704 + Echvi_4132 0.25 +0.9 4,948,704 + Echvi_4132 0.25 -0.2 4,948,704 + Echvi_4132 0.25 -0.8 4,948,704 + Echvi_4132 0.25 -0.8 4,948,704 + Echvi_4132 0.25 -0.4 4,948,705 - Echvi_4132 0.25 +0.4 4,948,705 - Echvi_4132 0.25 -0.3 4,948,705 - Echvi_4132 0.25 +0.0 4,948,846 - Echvi_4132 0.52 -0.3 4,948,854 + Echvi_4132 0.53 -0.8 4,948,854 + Echvi_4132 0.53 -1.0 4,948,865 + Echvi_4132 0.55 -1.0 4,948,908 + Echvi_4132 0.63 +0.3 4,948,911 + Echvi_4132 0.64 +0.1 4,948,911 + Echvi_4132 0.64 -1.0 4,948,911 + Echvi_4132 0.64 -0.5 4,948,912 - Echvi_4132 0.64 +0.6 4,948,929 + Echvi_4132 0.67 -1.0 4,948,931 + Echvi_4132 0.68 -0.2 4,948,931 + Echvi_4132 0.68 +0.2 4,948,931 + Echvi_4132 0.68 -0.2 4,948,931 + Echvi_4132 0.68 -0.2 4,948,931 + Echvi_4132 0.68 -0.1 4,948,931 + Echvi_4132 0.68 -0.5 4,948,931 + Echvi_4132 0.68 -0.8 4,948,931 + Echvi_4132 0.68 +0.6 4,948,931 + Echvi_4132 0.68 -0.2 4,948,932 - Echvi_4132 0.68 -1.5 4,948,932 - Echvi_4132 0.68 -0.5 4,948,932 - Echvi_4132 0.68 +1.7 4,948,933 + Echvi_4132 0.68 -1.2 4,948,934 - Echvi_4132 0.68 +1.0 4,948,934 - Echvi_4132 0.68 +0.1 4,948,942 + Echvi_4132 0.70 +0.6 4,948,942 + Echvi_4132 0.70 +2.4 4,948,943 - Echvi_4132 0.70 -0.4 4,948,943 - Echvi_4132 0.70 +1.1 4,948,943 - Echvi_4132 0.70 +0.7 4,948,943 - Echvi_4132 0.70 -0.2 4,948,943 - Echvi_4132 0.70 +0.2 4,948,943 - Echvi_4132 0.70 +0.2 4,948,981 - Echvi_4132 0.77 -0.5 4,948,981 - Echvi_4132 0.77 +0.8 4,948,981 - Echvi_4132 0.77 +0.9
Or see this region's nucleotide sequence