Experiment: m.b. perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1834 and Echvi_1835 are separated by 164 nucleotides Echvi_1835 and Echvi_1836 are separated by 54 nucleotides Echvi_1836 and Echvi_1837 are separated by 103 nucleotides
Echvi_1834: Echvi_1834 - ribosome small subunit-dependent GTPase A, at 2,150,355 to 2,151,284
_1834
Echvi_1835: Echvi_1835 - Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase, at 2,151,449 to 2,151,952
_1835
Echvi_1836: Echvi_1836 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 2,152,007 to 2,152,828
_1836
Echvi_1837: Echvi_1837 - hypothetical protein, at 2,152,932 to 2,154,020
_1837
Position (kb)
2151
2152 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2151.342 kb on - strand at 2151.342 kb on - strand at 2151.370 kb on - strand at 2151.440 kb on + strand at 2151.441 kb on - strand at 2151.459 kb on + strand at 2151.515 kb on + strand, within Echvi_1835 at 2151.555 kb on + strand, within Echvi_1835 at 2151.555 kb on + strand, within Echvi_1835 at 2151.556 kb on - strand, within Echvi_1835 at 2151.556 kb on - strand, within Echvi_1835 at 2151.574 kb on + strand, within Echvi_1835 at 2151.622 kb on - strand, within Echvi_1835 at 2151.636 kb on + strand, within Echvi_1835 at 2151.637 kb on - strand, within Echvi_1835 at 2151.661 kb on + strand, within Echvi_1835 at 2151.693 kb on + strand, within Echvi_1835 at 2151.766 kb on + strand, within Echvi_1835 at 2151.770 kb on + strand, within Echvi_1835 at 2151.794 kb on + strand, within Echvi_1835 at 2151.866 kb on + strand, within Echvi_1835 at 2151.866 kb on + strand, within Echvi_1835 at 2151.866 kb on + strand, within Echvi_1835 at 2151.868 kb on + strand, within Echvi_1835 at 2151.889 kb on + strand, within Echvi_1835 at 2151.890 kb on - strand, within Echvi_1835 at 2151.894 kb on + strand, within Echvi_1835 at 2151.895 kb on - strand, within Echvi_1835 at 2151.941 kb on + strand at 2151.954 kb on + strand at 2151.970 kb on + strand at 2152.003 kb on + strand at 2152.003 kb on + strand at 2152.841 kb on + strand at 2152.852 kb on + strand at 2152.856 kb on + strand at 2152.856 kb on + strand at 2152.856 kb on + strand at 2152.857 kb on - strand at 2152.880 kb on + strand at 2152.881 kb on - strand at 2152.881 kb on - strand at 2152.934 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 75 mM remove 2,151,342 - +0.1 2,151,342 - -0.1 2,151,370 - -0.3 2,151,440 + +0.2 2,151,441 - +0.7 2,151,459 + +0.7 2,151,515 + Echvi_1835 0.13 -0.4 2,151,555 + Echvi_1835 0.21 +0.1 2,151,555 + Echvi_1835 0.21 +0.7 2,151,556 - Echvi_1835 0.21 -1.1 2,151,556 - Echvi_1835 0.21 -0.8 2,151,574 + Echvi_1835 0.25 -0.1 2,151,622 - Echvi_1835 0.34 -0.5 2,151,636 + Echvi_1835 0.37 -0.1 2,151,637 - Echvi_1835 0.37 -1.3 2,151,661 + Echvi_1835 0.42 -1.1 2,151,693 + Echvi_1835 0.48 -1.2 2,151,766 + Echvi_1835 0.63 -2.9 2,151,770 + Echvi_1835 0.64 -0.4 2,151,794 + Echvi_1835 0.68 +1.5 2,151,866 + Echvi_1835 0.83 -0.1 2,151,866 + Echvi_1835 0.83 -1.2 2,151,866 + Echvi_1835 0.83 -1.5 2,151,868 + Echvi_1835 0.83 +0.0 2,151,889 + Echvi_1835 0.87 +0.5 2,151,890 - Echvi_1835 0.88 -0.5 2,151,894 + Echvi_1835 0.88 -0.2 2,151,895 - Echvi_1835 0.88 +0.1 2,151,941 + +1.3 2,151,954 + +1.1 2,151,970 + +0.7 2,152,003 + +0.2 2,152,003 + +0.9 2,152,841 + -0.2 2,152,852 + +1.2 2,152,856 + -0.1 2,152,856 + +0.2 2,152,856 + +0.8 2,152,857 - -0.4 2,152,880 + -0.3 2,152,881 - +0.2 2,152,881 - +0.0 2,152,934 - +0.6
Or see this region's nucleotide sequence