Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4536 and EX28DRAFT_4537 are separated by 244 nucleotides EX28DRAFT_4537 and EX28DRAFT_4538 are separated by 95 nucleotides EX28DRAFT_4538 and EX28DRAFT_4539 are separated by 38 nucleotides
EX28DRAFT_4536: EX28DRAFT_4536 - phosphomethylpyrimidine synthase, at 18,724 to 20,619
_4536
EX28DRAFT_4537: EX28DRAFT_4537 - Regulator of sigma D, at 20,864 to 21,361
_4537
EX28DRAFT_4538: EX28DRAFT_4538 - NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding, at 21,457 to 22,230
_4538
EX28DRAFT_4539: EX28DRAFT_4539 - uroporphyrinogen decarboxylase (EC 4.1.1.37), at 22,269 to 23,333
_4539
Position (kb) 21
22
23 Strain fitness (log2 ratio) -2
-1
0
1
2 at 20.518 kb on - strand at 20.518 kb on - strand at 20.519 kb on + strand at 20.614 kb on - strand at 20.619 kb on + strand at 20.619 kb on + strand at 20.619 kb on + strand at 20.619 kb on + strand at 20.619 kb on + strand at 20.619 kb on + strand at 20.619 kb on + strand at 20.620 kb on - strand at 20.620 kb on - strand at 20.620 kb on - strand at 20.620 kb on - strand at 20.620 kb on - strand at 20.693 kb on - strand at 20.838 kb on + strand at 20.838 kb on + strand at 20.936 kb on - strand, within EX28DRAFT_4537 at 20.936 kb on - strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.003 kb on + strand, within EX28DRAFT_4537 at 21.004 kb on - strand, within EX28DRAFT_4537 at 21.004 kb on - strand, within EX28DRAFT_4537 at 21.004 kb on - strand, within EX28DRAFT_4537 at 21.004 kb on - strand, within EX28DRAFT_4537 at 21.004 kb on - strand, within EX28DRAFT_4537 at 21.008 kb on - strand, within EX28DRAFT_4537 at 21.042 kb on + strand, within EX28DRAFT_4537 at 21.045 kb on + strand, within EX28DRAFT_4537 at 21.045 kb on + strand, within EX28DRAFT_4537 at 21.045 kb on + strand, within EX28DRAFT_4537 at 21.102 kb on - strand, within EX28DRAFT_4537 at 21.105 kb on + strand, within EX28DRAFT_4537 at 21.145 kb on - strand, within EX28DRAFT_4537 at 21.149 kb on - strand, within EX28DRAFT_4537 at 21.171 kb on + strand, within EX28DRAFT_4537 at 21.172 kb on - strand, within EX28DRAFT_4537 at 21.244 kb on + strand, within EX28DRAFT_4537 at 21.244 kb on + strand, within EX28DRAFT_4537 at 21.245 kb on - strand, within EX28DRAFT_4537 at 21.261 kb on + strand, within EX28DRAFT_4537 at 21.275 kb on + strand, within EX28DRAFT_4537 at 21.276 kb on - strand, within EX28DRAFT_4537 at 21.276 kb on - strand, within EX28DRAFT_4537 at 21.287 kb on + strand, within EX28DRAFT_4537 at 21.288 kb on - strand, within EX28DRAFT_4537 at 21.288 kb on - strand, within EX28DRAFT_4537 at 21.288 kb on - strand, within EX28DRAFT_4537 at 21.293 kb on + strand, within EX28DRAFT_4537 at 21.293 kb on + strand, within EX28DRAFT_4537 at 21.294 kb on - strand, within EX28DRAFT_4537 at 21.357 kb on - strand at 21.357 kb on - strand at 21.380 kb on + strand at 21.381 kb on - strand at 21.407 kb on + strand at 21.444 kb on + strand at 21.452 kb on + strand at 21.453 kb on - strand at 21.453 kb on - strand at 21.453 kb on - strand at 21.453 kb on - strand at 21.456 kb on + strand at 21.456 kb on + strand at 21.456 kb on + strand at 21.456 kb on + strand at 21.457 kb on - strand at 21.465 kb on + strand at 21.466 kb on - strand at 21.466 kb on - strand at 21.469 kb on - strand at 21.519 kb on - strand at 21.684 kb on - strand, within EX28DRAFT_4538 at 21.741 kb on + strand, within EX28DRAFT_4538 at 21.741 kb on + strand, within EX28DRAFT_4538 at 21.742 kb on - strand, within EX28DRAFT_4538 at 21.745 kb on + strand, within EX28DRAFT_4538 at 21.745 kb on + strand, within EX28DRAFT_4538 at 21.745 kb on + strand, within EX28DRAFT_4538 at 21.746 kb on - strand, within EX28DRAFT_4538 at 21.746 kb on - strand, within EX28DRAFT_4538 at 21.746 kb on - strand, within EX28DRAFT_4538 at 21.823 kb on + strand, within EX28DRAFT_4538 at 21.850 kb on - strand, within EX28DRAFT_4538 at 22.069 kb on - strand, within EX28DRAFT_4538 at 22.078 kb on + strand, within EX28DRAFT_4538 at 22.190 kb on + strand at 22.191 kb on - strand at 22.198 kb on - strand at 22.222 kb on + strand at 22.223 kb on - strand at 22.228 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 20,518 - -0.3 20,518 - -0.9 20,519 + +0.6 20,614 - +0.3 20,619 + +0.1 20,619 + -2.2 20,619 + +0.2 20,619 + +0.0 20,619 + -0.2 20,619 + -0.9 20,619 + +1.8 20,620 - +0.1 20,620 - -0.6 20,620 - +0.4 20,620 - -0.7 20,620 - -0.1 20,693 - +0.1 20,838 + +0.5 20,838 + -0.6 20,936 - EX28DRAFT_4537 0.14 +0.1 20,936 - EX28DRAFT_4537 0.14 +0.0 21,003 + EX28DRAFT_4537 0.28 -0.3 21,003 + EX28DRAFT_4537 0.28 -1.6 21,003 + EX28DRAFT_4537 0.28 +0.3 21,003 + EX28DRAFT_4537 0.28 +1.3 21,003 + EX28DRAFT_4537 0.28 +0.2 21,003 + EX28DRAFT_4537 0.28 +0.6 21,003 + EX28DRAFT_4537 0.28 +0.5 21,003 + EX28DRAFT_4537 0.28 +0.4 21,004 - EX28DRAFT_4537 0.28 -0.6 21,004 - EX28DRAFT_4537 0.28 +0.5 21,004 - EX28DRAFT_4537 0.28 +0.1 21,004 - EX28DRAFT_4537 0.28 -1.2 21,004 - EX28DRAFT_4537 0.28 +0.5 21,008 - EX28DRAFT_4537 0.29 +0.3 21,042 + EX28DRAFT_4537 0.36 +0.2 21,045 + EX28DRAFT_4537 0.36 -0.3 21,045 + EX28DRAFT_4537 0.36 +0.5 21,045 + EX28DRAFT_4537 0.36 -0.1 21,102 - EX28DRAFT_4537 0.48 +1.0 21,105 + EX28DRAFT_4537 0.48 +0.1 21,145 - EX28DRAFT_4537 0.56 -1.0 21,149 - EX28DRAFT_4537 0.57 +0.1 21,171 + EX28DRAFT_4537 0.62 +0.2 21,172 - EX28DRAFT_4537 0.62 -0.1 21,244 + EX28DRAFT_4537 0.76 +0.4 21,244 + EX28DRAFT_4537 0.76 +0.0 21,245 - EX28DRAFT_4537 0.77 -0.0 21,261 + EX28DRAFT_4537 0.80 +0.3 21,275 + EX28DRAFT_4537 0.83 +0.2 21,276 - EX28DRAFT_4537 0.83 +1.6 21,276 - EX28DRAFT_4537 0.83 +0.4 21,287 + EX28DRAFT_4537 0.85 +0.3 21,288 - EX28DRAFT_4537 0.85 +0.3 21,288 - EX28DRAFT_4537 0.85 -0.1 21,288 - EX28DRAFT_4537 0.85 -0.0 21,293 + EX28DRAFT_4537 0.86 +0.4 21,293 + EX28DRAFT_4537 0.86 -0.3 21,294 - EX28DRAFT_4537 0.86 -0.2 21,357 - -0.1 21,357 - +0.0 21,380 + +0.4 21,381 - -0.2 21,407 + -0.6 21,444 + -0.6 21,452 + +0.0 21,453 - -0.6 21,453 - +0.0 21,453 - -0.5 21,453 - -0.7 21,456 + -0.2 21,456 + -1.6 21,456 + -0.2 21,456 + +0.6 21,457 - +0.5 21,465 + +0.1 21,466 - -0.5 21,466 - +0.1 21,469 - -0.1 21,519 - -0.2 21,684 - EX28DRAFT_4538 0.29 -0.7 21,741 + EX28DRAFT_4538 0.37 +0.6 21,741 + EX28DRAFT_4538 0.37 -0.2 21,742 - EX28DRAFT_4538 0.37 +0.7 21,745 + EX28DRAFT_4538 0.37 +0.9 21,745 + EX28DRAFT_4538 0.37 +1.4 21,745 + EX28DRAFT_4538 0.37 -0.0 21,746 - EX28DRAFT_4538 0.37 -0.8 21,746 - EX28DRAFT_4538 0.37 -1.5 21,746 - EX28DRAFT_4538 0.37 -0.1 21,823 + EX28DRAFT_4538 0.47 -1.9 21,850 - EX28DRAFT_4538 0.51 -0.2 22,069 - EX28DRAFT_4538 0.79 -0.8 22,078 + EX28DRAFT_4538 0.80 -1.0 22,190 + -0.8 22,191 - +0.1 22,198 - +0.4 22,222 + -0.1 22,223 - -0.7 22,228 + -0.5
Or see this region's nucleotide sequence