Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4513 and EX28DRAFT_4514 are separated by 10 nucleotides EX28DRAFT_4514 and EX28DRAFT_4515 overlap by 76 nucleotides EX28DRAFT_4515 and EX28DRAFT_4516 are separated by 262 nucleotides
EX28DRAFT_4513: EX28DRAFT_4513 - Trk-type K+ transport systems, membrane components, at 79,713 to 81,164
_4513
EX28DRAFT_4514: EX28DRAFT_4514 - Flavodoxin, at 81,175 to 81,720
_4514
EX28DRAFT_4515: EX28DRAFT_4515 - hypothetical protein, at 81,645 to 81,830
_4515
EX28DRAFT_4516: EX28DRAFT_4516 - 16S, at 82,093 to 82,150
_4516
Position (kb) 81
82 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 80.650 kb on + strand, within EX28DRAFT_4513 at 80.726 kb on - strand, within EX28DRAFT_4513 at 80.738 kb on + strand, within EX28DRAFT_4513 at 80.787 kb on - strand, within EX28DRAFT_4513 at 80.787 kb on - strand, within EX28DRAFT_4513 at 80.859 kb on - strand, within EX28DRAFT_4513 at 80.859 kb on - strand, within EX28DRAFT_4513 at 80.859 kb on - strand, within EX28DRAFT_4513 at 81.095 kb on + strand at 81.146 kb on + strand at 81.695 kb on + strand at 81.714 kb on + strand at 81.714 kb on + strand at 81.715 kb on - strand at 81.715 kb on - strand at 81.718 kb on + strand at 81.718 kb on + strand at 81.718 kb on + strand at 81.726 kb on - strand, within EX28DRAFT_4515 at 81.785 kb on - strand, within EX28DRAFT_4515 at 81.793 kb on - strand, within EX28DRAFT_4515
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 80,650 + EX28DRAFT_4513 0.65 -0.6 80,726 - EX28DRAFT_4513 0.70 -1.5 80,738 + EX28DRAFT_4513 0.71 -0.7 80,787 - EX28DRAFT_4513 0.74 -1.3 80,787 - EX28DRAFT_4513 0.74 -3.7 80,859 - EX28DRAFT_4513 0.79 -0.8 80,859 - EX28DRAFT_4513 0.79 -0.5 80,859 - EX28DRAFT_4513 0.79 -1.2 81,095 + -1.1 81,146 + -1.0 81,695 + -0.2 81,714 + +1.0 81,714 + -0.3 81,715 - +0.4 81,715 - +0.6 81,718 + -0.2 81,718 + +0.0 81,718 + -0.3 81,726 - EX28DRAFT_4515 0.44 -1.4 81,785 - EX28DRAFT_4515 0.75 +0.4 81,793 - EX28DRAFT_4515 0.80 -2.6
Or see this region's nucleotide sequence