Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4496 and EX28DRAFT_4497 are separated by 139 nucleotides EX28DRAFT_4497 and EX28DRAFT_4498 are separated by 66 nucleotides EX28DRAFT_4498 and EX28DRAFT_4499 are separated by 13 nucleotides
EX28DRAFT_4496: EX28DRAFT_4496 - uridine phosphorylase, at 63,183 to 63,944
_4496
EX28DRAFT_4497: EX28DRAFT_4497 - Uncharacterized protein conserved in bacteria, at 64,084 to 65,541
_4497
EX28DRAFT_4498: EX28DRAFT_4498 - ubiquinone/menaquinone biosynthesis methyltransferases, at 65,608 to 66,363
_4498
EX28DRAFT_4499: EX28DRAFT_4499 - Uncharacterized protein conserved in bacteria, at 66,377 to 66,982
_4499
Position (kb) 64
65
66 Strain fitness (log2 ratio) -1
0
1 at 63.122 kb on - strand at 63.182 kb on + strand at 63.182 kb on + strand at 63.182 kb on + strand at 63.182 kb on + strand at 63.182 kb on + strand at 63.183 kb on - strand at 63.183 kb on - strand at 63.183 kb on - strand at 63.183 kb on - strand at 63.183 kb on - strand at 63.188 kb on + strand at 63.300 kb on - strand, within EX28DRAFT_4496 at 63.443 kb on + strand, within EX28DRAFT_4496 at 63.712 kb on + strand, within EX28DRAFT_4496 at 63.713 kb on - strand, within EX28DRAFT_4496 at 63.713 kb on - strand, within EX28DRAFT_4496 at 63.765 kb on + strand, within EX28DRAFT_4496 at 63.852 kb on - strand, within EX28DRAFT_4496 at 63.942 kb on + strand at 63.942 kb on + strand at 63.943 kb on - strand at 64.063 kb on + strand at 64.063 kb on + strand at 64.064 kb on - strand at 64.064 kb on - strand at 64.089 kb on + strand at 64.090 kb on - strand at 64.305 kb on + strand, within EX28DRAFT_4497 at 64.311 kb on + strand, within EX28DRAFT_4497 at 64.311 kb on + strand, within EX28DRAFT_4497 at 64.312 kb on - strand, within EX28DRAFT_4497 at 64.312 kb on - strand, within EX28DRAFT_4497 at 64.312 kb on - strand, within EX28DRAFT_4497 at 64.312 kb on - strand, within EX28DRAFT_4497 at 64.756 kb on + strand, within EX28DRAFT_4497 at 64.757 kb on - strand, within EX28DRAFT_4497 at 64.873 kb on + strand, within EX28DRAFT_4497 at 64.874 kb on - strand, within EX28DRAFT_4497 at 64.874 kb on - strand, within EX28DRAFT_4497 at 64.882 kb on + strand, within EX28DRAFT_4497 at 64.882 kb on + strand, within EX28DRAFT_4497 at 64.882 kb on + strand, within EX28DRAFT_4497 at 64.903 kb on + strand, within EX28DRAFT_4497 at 64.904 kb on - strand, within EX28DRAFT_4497 at 64.953 kb on + strand, within EX28DRAFT_4497 at 64.953 kb on + strand, within EX28DRAFT_4497 at 65.011 kb on + strand, within EX28DRAFT_4497 at 65.012 kb on - strand, within EX28DRAFT_4497 at 65.077 kb on - strand, within EX28DRAFT_4497 at 65.097 kb on + strand, within EX28DRAFT_4497 at 65.098 kb on - strand, within EX28DRAFT_4497 at 65.143 kb on - strand, within EX28DRAFT_4497 at 65.286 kb on + strand, within EX28DRAFT_4497 at 65.388 kb on + strand, within EX28DRAFT_4497 at 65.464 kb on - strand at 65.569 kb on + strand at 66.486 kb on + strand, within EX28DRAFT_4499 at 66.528 kb on + strand, within EX28DRAFT_4499
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 63,122 - +0.1 63,182 + +0.3 63,182 + +0.1 63,182 + -0.0 63,182 + -0.1 63,182 + +0.1 63,183 - -0.2 63,183 - -0.5 63,183 - +1.0 63,183 - -0.7 63,183 - +0.2 63,188 + +0.0 63,300 - EX28DRAFT_4496 0.15 -1.0 63,443 + EX28DRAFT_4496 0.34 +0.0 63,712 + EX28DRAFT_4496 0.69 -0.4 63,713 - EX28DRAFT_4496 0.70 +1.1 63,713 - EX28DRAFT_4496 0.70 +1.0 63,765 + EX28DRAFT_4496 0.76 +0.4 63,852 - EX28DRAFT_4496 0.88 -0.3 63,942 + -0.8 63,942 + -1.4 63,943 - +1.4 64,063 + +0.1 64,063 + +0.4 64,064 - -0.1 64,064 - +0.6 64,089 + -0.8 64,090 - -0.2 64,305 + EX28DRAFT_4497 0.15 -0.4 64,311 + EX28DRAFT_4497 0.16 -0.7 64,311 + EX28DRAFT_4497 0.16 -1.3 64,312 - EX28DRAFT_4497 0.16 +0.2 64,312 - EX28DRAFT_4497 0.16 -0.2 64,312 - EX28DRAFT_4497 0.16 +0.1 64,312 - EX28DRAFT_4497 0.16 +0.6 64,756 + EX28DRAFT_4497 0.46 -0.3 64,757 - EX28DRAFT_4497 0.46 -0.1 64,873 + EX28DRAFT_4497 0.54 -0.2 64,874 - EX28DRAFT_4497 0.54 -0.1 64,874 - EX28DRAFT_4497 0.54 +0.2 64,882 + EX28DRAFT_4497 0.55 -0.6 64,882 + EX28DRAFT_4497 0.55 +0.0 64,882 + EX28DRAFT_4497 0.55 +0.2 64,903 + EX28DRAFT_4497 0.56 -0.4 64,904 - EX28DRAFT_4497 0.56 -0.9 64,953 + EX28DRAFT_4497 0.60 -0.1 64,953 + EX28DRAFT_4497 0.60 -0.9 65,011 + EX28DRAFT_4497 0.64 +0.2 65,012 - EX28DRAFT_4497 0.64 +0.7 65,077 - EX28DRAFT_4497 0.68 +0.2 65,097 + EX28DRAFT_4497 0.69 +0.0 65,098 - EX28DRAFT_4497 0.70 -1.1 65,143 - EX28DRAFT_4497 0.73 +0.0 65,286 + EX28DRAFT_4497 0.82 +0.3 65,388 + EX28DRAFT_4497 0.89 -1.6 65,464 - -0.6 65,569 + +0.9 66,486 + EX28DRAFT_4499 0.18 -0.2 66,528 + EX28DRAFT_4499 0.25 -0.2
Or see this region's nucleotide sequence