Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4470 and EX28DRAFT_4471 are separated by 172 nucleotides EX28DRAFT_4471 and EX28DRAFT_4472 are separated by 2 nucleotides
EX28DRAFT_4470: EX28DRAFT_4470 - hypothetical protein, at 34,262 to 35,473
_4470
EX28DRAFT_4471: EX28DRAFT_4471 - heme biosynthesis-associated TPR protein, at 35,646 to 36,845
_4471
EX28DRAFT_4472: EX28DRAFT_4472 - Uncharacterized enzyme of heme biosynthesis, at 36,848 to 38,044
_4472
Position (kb) 35
36
37 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 34.832 kb on + strand, within EX28DRAFT_4470 at 34.861 kb on + strand, within EX28DRAFT_4470 at 34.861 kb on + strand, within EX28DRAFT_4470 at 34.905 kb on - strand, within EX28DRAFT_4470 at 34.905 kb on - strand, within EX28DRAFT_4470 at 35.066 kb on - strand, within EX28DRAFT_4470 at 35.078 kb on - strand, within EX28DRAFT_4470 at 35.078 kb on - strand, within EX28DRAFT_4470 at 35.342 kb on + strand, within EX28DRAFT_4470 at 35.373 kb on - strand at 35.457 kb on + strand at 35.457 kb on + strand at 35.457 kb on + strand at 35.555 kb on + strand at 35.555 kb on + strand at 35.556 kb on - strand at 35.596 kb on + strand at 35.596 kb on + strand at 35.597 kb on - strand at 36.074 kb on + strand, within EX28DRAFT_4471 at 36.256 kb on + strand, within EX28DRAFT_4471 at 36.256 kb on + strand, within EX28DRAFT_4471 at 36.256 kb on + strand, within EX28DRAFT_4471 at 36.257 kb on - strand, within EX28DRAFT_4471 at 36.566 kb on + strand, within EX28DRAFT_4471 at 36.789 kb on - strand at 36.850 kb on - strand at 36.947 kb on + strand at 36.948 kb on - strand at 37.033 kb on + strand, within EX28DRAFT_4472 at 37.039 kb on + strand, within EX28DRAFT_4472 at 37.080 kb on + strand, within EX28DRAFT_4472 at 37.125 kb on + strand, within EX28DRAFT_4472 at 37.125 kb on + strand, within EX28DRAFT_4472 at 37.126 kb on - strand, within EX28DRAFT_4472 at 37.197 kb on + strand, within EX28DRAFT_4472 at 37.197 kb on + strand, within EX28DRAFT_4472 at 37.197 kb on + strand, within EX28DRAFT_4472 at 37.197 kb on + strand, within EX28DRAFT_4472 at 37.198 kb on - strand, within EX28DRAFT_4472 at 37.202 kb on - strand, within EX28DRAFT_4472 at 37.589 kb on - strand, within EX28DRAFT_4472
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 34,832 + EX28DRAFT_4470 0.47 -3.3 34,861 + EX28DRAFT_4470 0.49 +0.1 34,861 + EX28DRAFT_4470 0.49 -0.2 34,905 - EX28DRAFT_4470 0.53 +1.1 34,905 - EX28DRAFT_4470 0.53 +0.7 35,066 - EX28DRAFT_4470 0.66 -0.3 35,078 - EX28DRAFT_4470 0.67 +0.2 35,078 - EX28DRAFT_4470 0.67 -0.4 35,342 + EX28DRAFT_4470 0.89 +0.7 35,373 - +0.6 35,457 + -0.1 35,457 + -0.1 35,457 + -0.1 35,555 + +0.3 35,555 + -1.1 35,556 - -0.3 35,596 + -0.2 35,596 + -0.5 35,597 - -0.3 36,074 + EX28DRAFT_4471 0.36 -2.6 36,256 + EX28DRAFT_4471 0.51 -2.8 36,256 + EX28DRAFT_4471 0.51 +0.2 36,256 + EX28DRAFT_4471 0.51 -0.0 36,257 - EX28DRAFT_4471 0.51 -0.7 36,566 + EX28DRAFT_4471 0.77 +0.1 36,789 - -0.1 36,850 - -0.3 36,947 + -0.7 36,948 - -0.1 37,033 + EX28DRAFT_4472 0.15 -0.1 37,039 + EX28DRAFT_4472 0.16 -2.0 37,080 + EX28DRAFT_4472 0.19 -0.8 37,125 + EX28DRAFT_4472 0.23 -1.3 37,125 + EX28DRAFT_4472 0.23 -1.8 37,126 - EX28DRAFT_4472 0.23 +0.8 37,197 + EX28DRAFT_4472 0.29 +0.2 37,197 + EX28DRAFT_4472 0.29 -0.1 37,197 + EX28DRAFT_4472 0.29 -1.0 37,197 + EX28DRAFT_4472 0.29 -0.3 37,198 - EX28DRAFT_4472 0.29 +0.5 37,202 - EX28DRAFT_4472 0.30 -3.5 37,589 - EX28DRAFT_4472 0.62 +0.1
Or see this region's nucleotide sequence