Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4450 and EX28DRAFT_4451 are separated by 6 nucleotides EX28DRAFT_4451 and EX28DRAFT_4452 are separated by 144 nucleotides EX28DRAFT_4452 and EX28DRAFT_4453 are separated by 345 nucleotides
EX28DRAFT_4450: EX28DRAFT_4450 - Exopolyphosphatase, at 15,690 to 17,174
_4450
EX28DRAFT_4451: EX28DRAFT_4451 - Superfamily II DNA and RNA helicases, at 17,181 to 18,449
_4451
EX28DRAFT_4452: EX28DRAFT_4452 - thioredoxin, at 18,594 to 18,923
_4452
EX28DRAFT_4453: EX28DRAFT_4453 - transcription termination factor Rho, at 19,269 to 20,528
_4453
Position (kb) 17
18
19 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 16.275 kb on + strand, within EX28DRAFT_4450 at 17.117 kb on + strand at 17.299 kb on + strand at 17.329 kb on + strand, within EX28DRAFT_4451 at 17.330 kb on - strand, within EX28DRAFT_4451 at 17.359 kb on + strand, within EX28DRAFT_4451 at 17.359 kb on + strand, within EX28DRAFT_4451 at 17.379 kb on - strand, within EX28DRAFT_4451 at 17.428 kb on - strand, within EX28DRAFT_4451 at 17.428 kb on - strand, within EX28DRAFT_4451 at 17.428 kb on - strand, within EX28DRAFT_4451 at 17.432 kb on - strand, within EX28DRAFT_4451 at 17.432 kb on - strand, within EX28DRAFT_4451 at 17.459 kb on - strand, within EX28DRAFT_4451 at 17.505 kb on + strand, within EX28DRAFT_4451 at 17.559 kb on - strand, within EX28DRAFT_4451 at 17.793 kb on + strand, within EX28DRAFT_4451 at 17.921 kb on + strand, within EX28DRAFT_4451 at 18.183 kb on - strand, within EX28DRAFT_4451 at 18.238 kb on - strand, within EX28DRAFT_4451 at 18.450 kb on - strand at 18.457 kb on + strand at 18.470 kb on + strand at 18.470 kb on + strand at 18.471 kb on - strand at 18.516 kb on + strand at 18.576 kb on - strand at 18.590 kb on - strand at 18.591 kb on + strand at 18.591 kb on + strand at 18.592 kb on - strand at 18.593 kb on + strand at 18.593 kb on + strand at 18.594 kb on - strand at 18.644 kb on - strand, within EX28DRAFT_4452 at 18.647 kb on + strand, within EX28DRAFT_4452 at 18.805 kb on - strand, within EX28DRAFT_4452 at 19.005 kb on + strand at 19.018 kb on + strand at 19.018 kb on + strand at 19.024 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 16,275 + EX28DRAFT_4450 0.39 -0.1 17,117 + -0.4 17,299 + -0.3 17,329 + EX28DRAFT_4451 0.12 +1.8 17,330 - EX28DRAFT_4451 0.12 +1.1 17,359 + EX28DRAFT_4451 0.14 -2.9 17,359 + EX28DRAFT_4451 0.14 +0.2 17,379 - EX28DRAFT_4451 0.16 +0.5 17,428 - EX28DRAFT_4451 0.19 +0.9 17,428 - EX28DRAFT_4451 0.19 +0.8 17,428 - EX28DRAFT_4451 0.19 +0.9 17,432 - EX28DRAFT_4451 0.20 +1.1 17,432 - EX28DRAFT_4451 0.20 +1.1 17,459 - EX28DRAFT_4451 0.22 +0.5 17,505 + EX28DRAFT_4451 0.26 -0.4 17,559 - EX28DRAFT_4451 0.30 +0.7 17,793 + EX28DRAFT_4451 0.48 +0.4 17,921 + EX28DRAFT_4451 0.58 +0.7 18,183 - EX28DRAFT_4451 0.79 +1.3 18,238 - EX28DRAFT_4451 0.83 +1.1 18,450 - +0.4 18,457 + +0.5 18,470 + +1.0 18,470 + +1.0 18,471 - +0.3 18,516 + +0.5 18,576 - -1.7 18,590 - -3.0 18,591 + -0.6 18,591 + -0.7 18,592 - -2.1 18,593 + -2.0 18,593 + -0.8 18,594 - +1.5 18,644 - EX28DRAFT_4452 0.15 -4.2 18,647 + EX28DRAFT_4452 0.16 -0.9 18,805 - EX28DRAFT_4452 0.64 +0.9 19,005 + +0.7 19,018 + +0.7 19,018 + -0.1 19,024 + +0.6
Or see this region's nucleotide sequence