Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4355 and EX28DRAFT_4356 are separated by 43 nucleotides EX28DRAFT_4356 and EX28DRAFT_4357 are separated by 45 nucleotides
EX28DRAFT_4355: EX28DRAFT_4355 - sugar (Glycoside-Pentoside-Hexuronide) transporter, at 18,649 to 20,073
_4355
EX28DRAFT_4356: EX28DRAFT_4356 - sugar (Glycoside-Pentoside-Hexuronide) transporter, at 20,117 to 21,499
_4356
EX28DRAFT_4357: EX28DRAFT_4357 - Alpha-glucosidases, family 31 of glycosyl hydrolases, at 21,545 to 23,569
_4357
Position (kb)
20
21
22 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 19.274 kb on + strand, within EX28DRAFT_4355 at 19.274 kb on + strand, within EX28DRAFT_4355 at 19.283 kb on + strand, within EX28DRAFT_4355 at 19.284 kb on - strand, within EX28DRAFT_4355 at 19.284 kb on - strand, within EX28DRAFT_4355 at 19.286 kb on + strand, within EX28DRAFT_4355 at 19.286 kb on + strand, within EX28DRAFT_4355 at 19.404 kb on + strand, within EX28DRAFT_4355 at 19.405 kb on - strand, within EX28DRAFT_4355 at 19.405 kb on - strand, within EX28DRAFT_4355 at 19.431 kb on - strand, within EX28DRAFT_4355 at 19.431 kb on - strand, within EX28DRAFT_4355 at 19.451 kb on + strand, within EX28DRAFT_4355 at 19.683 kb on - strand, within EX28DRAFT_4355 at 19.919 kb on + strand, within EX28DRAFT_4355 at 19.919 kb on + strand, within EX28DRAFT_4355 at 19.920 kb on - strand, within EX28DRAFT_4355 at 19.920 kb on - strand, within EX28DRAFT_4355 at 20.039 kb on - strand at 20.064 kb on + strand at 20.065 kb on - strand at 20.065 kb on - strand at 20.065 kb on - strand at 20.065 kb on - strand at 20.065 kb on - strand at 20.107 kb on - strand at 20.119 kb on - strand at 20.126 kb on - strand at 20.126 kb on - strand at 20.163 kb on + strand at 20.163 kb on + strand at 20.163 kb on + strand at 20.163 kb on + strand at 20.163 kb on + strand at 20.164 kb on - strand at 20.164 kb on - strand at 20.164 kb on - strand at 20.164 kb on - strand at 20.164 kb on - strand at 20.164 kb on - strand at 20.185 kb on - strand at 20.237 kb on - strand at 20.237 kb on - strand at 20.237 kb on - strand at 20.240 kb on + strand at 20.241 kb on - strand at 20.241 kb on - strand at 20.349 kb on - strand, within EX28DRAFT_4356 at 20.529 kb on + strand, within EX28DRAFT_4356 at 20.574 kb on + strand, within EX28DRAFT_4356 at 20.575 kb on - strand, within EX28DRAFT_4356 at 20.661 kb on + strand, within EX28DRAFT_4356 at 20.661 kb on + strand, within EX28DRAFT_4356 at 20.662 kb on - strand, within EX28DRAFT_4356 at 20.662 kb on - strand, within EX28DRAFT_4356 at 20.662 kb on - strand, within EX28DRAFT_4356 at 20.691 kb on + strand, within EX28DRAFT_4356 at 20.692 kb on - strand, within EX28DRAFT_4356 at 20.700 kb on + strand, within EX28DRAFT_4356 at 20.703 kb on + strand, within EX28DRAFT_4356 at 20.768 kb on - strand, within EX28DRAFT_4356 at 20.853 kb on + strand, within EX28DRAFT_4356 at 20.875 kb on - strand, within EX28DRAFT_4356 at 20.887 kb on + strand, within EX28DRAFT_4356 at 20.887 kb on + strand, within EX28DRAFT_4356 at 20.888 kb on - strand, within EX28DRAFT_4356 at 20.888 kb on - strand, within EX28DRAFT_4356 at 20.932 kb on - strand, within EX28DRAFT_4356 at 20.932 kb on - strand, within EX28DRAFT_4356 at 20.987 kb on - strand, within EX28DRAFT_4356 at 21.118 kb on - strand, within EX28DRAFT_4356 at 21.220 kb on - strand, within EX28DRAFT_4356 at 21.342 kb on + strand, within EX28DRAFT_4356 at 21.373 kb on - strand at 21.416 kb on - strand at 21.455 kb on - strand at 21.467 kb on + strand at 21.468 kb on - strand at 21.487 kb on + strand at 21.488 kb on - strand at 21.488 kb on - strand at 21.488 kb on - strand at 21.500 kb on + strand at 21.501 kb on - strand at 21.503 kb on + strand at 21.504 kb on - strand at 21.504 kb on - strand at 21.550 kb on + strand at 21.551 kb on - strand at 21.557 kb on + strand at 21.557 kb on + strand at 21.558 kb on - strand at 21.558 kb on - strand at 21.558 kb on - strand at 21.696 kb on + strand at 21.762 kb on + strand, within EX28DRAFT_4357 at 21.769 kb on - strand, within EX28DRAFT_4357 at 21.802 kb on - strand, within EX28DRAFT_4357 at 21.870 kb on + strand, within EX28DRAFT_4357 at 21.871 kb on - strand, within EX28DRAFT_4357 at 22.057 kb on + strand, within EX28DRAFT_4357 at 22.274 kb on - strand, within EX28DRAFT_4357 at 22.274 kb on - strand, within EX28DRAFT_4357 at 22.357 kb on - strand, within EX28DRAFT_4357 at 22.470 kb on + strand, within EX28DRAFT_4357
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 19,274 + EX28DRAFT_4355 0.44 -0.9 19,274 + EX28DRAFT_4355 0.44 -0.4 19,283 + EX28DRAFT_4355 0.44 -0.7 19,284 - EX28DRAFT_4355 0.45 -0.1 19,284 - EX28DRAFT_4355 0.45 -0.0 19,286 + EX28DRAFT_4355 0.45 +0.7 19,286 + EX28DRAFT_4355 0.45 +0.5 19,404 + EX28DRAFT_4355 0.53 -1.6 19,405 - EX28DRAFT_4355 0.53 +0.3 19,405 - EX28DRAFT_4355 0.53 -0.2 19,431 - EX28DRAFT_4355 0.55 -1.2 19,431 - EX28DRAFT_4355 0.55 -0.8 19,451 + EX28DRAFT_4355 0.56 +0.4 19,683 - EX28DRAFT_4355 0.73 +0.8 19,919 + EX28DRAFT_4355 0.89 +0.1 19,919 + EX28DRAFT_4355 0.89 +0.3 19,920 - EX28DRAFT_4355 0.89 +0.6 19,920 - EX28DRAFT_4355 0.89 +0.5 20,039 - -0.3 20,064 + -0.8 20,065 - -0.3 20,065 - +0.4 20,065 - -0.4 20,065 - +0.2 20,065 - -0.1 20,107 - +1.2 20,119 - -0.1 20,126 - +1.0 20,126 - -0.3 20,163 + +0.5 20,163 + -0.8 20,163 + -0.2 20,163 + -0.1 20,163 + -1.2 20,164 - +0.0 20,164 - -0.1 20,164 - +0.2 20,164 - +0.5 20,164 - +0.4 20,164 - -1.1 20,185 - +0.2 20,237 - +0.7 20,237 - +0.2 20,237 - +1.0 20,240 + +0.5 20,241 - +2.4 20,241 - +0.2 20,349 - EX28DRAFT_4356 0.17 +0.6 20,529 + EX28DRAFT_4356 0.30 +0.3 20,574 + EX28DRAFT_4356 0.33 +0.6 20,575 - EX28DRAFT_4356 0.33 +0.1 20,661 + EX28DRAFT_4356 0.39 +1.8 20,661 + EX28DRAFT_4356 0.39 -0.5 20,662 - EX28DRAFT_4356 0.39 +0.6 20,662 - EX28DRAFT_4356 0.39 +0.1 20,662 - EX28DRAFT_4356 0.39 -0.2 20,691 + EX28DRAFT_4356 0.42 -0.3 20,692 - EX28DRAFT_4356 0.42 -0.1 20,700 + EX28DRAFT_4356 0.42 -1.5 20,703 + EX28DRAFT_4356 0.42 -3.5 20,768 - EX28DRAFT_4356 0.47 -0.4 20,853 + EX28DRAFT_4356 0.53 +0.3 20,875 - EX28DRAFT_4356 0.55 -0.0 20,887 + EX28DRAFT_4356 0.56 -0.3 20,887 + EX28DRAFT_4356 0.56 -0.4 20,888 - EX28DRAFT_4356 0.56 +0.6 20,888 - EX28DRAFT_4356 0.56 +0.3 20,932 - EX28DRAFT_4356 0.59 -0.9 20,932 - EX28DRAFT_4356 0.59 +0.3 20,987 - EX28DRAFT_4356 0.63 -0.3 21,118 - EX28DRAFT_4356 0.72 +1.1 21,220 - EX28DRAFT_4356 0.80 +0.2 21,342 + EX28DRAFT_4356 0.89 +0.6 21,373 - +0.3 21,416 - -0.3 21,455 - -0.5 21,467 + +1.3 21,468 - -1.0 21,487 + +0.1 21,488 - -0.6 21,488 - -0.4 21,488 - +0.3 21,500 + -1.4 21,501 - +0.5 21,503 + +0.3 21,504 - +0.0 21,504 - -0.0 21,550 + -0.1 21,551 - -0.1 21,557 + -0.4 21,557 + +0.8 21,558 - +0.4 21,558 - +0.4 21,558 - +0.4 21,696 + +0.3 21,762 + EX28DRAFT_4357 0.11 -2.3 21,769 - EX28DRAFT_4357 0.11 +0.1 21,802 - EX28DRAFT_4357 0.13 +0.0 21,870 + EX28DRAFT_4357 0.16 +0.7 21,871 - EX28DRAFT_4357 0.16 -0.4 22,057 + EX28DRAFT_4357 0.25 -0.6 22,274 - EX28DRAFT_4357 0.36 +0.2 22,274 - EX28DRAFT_4357 0.36 +0.0 22,357 - EX28DRAFT_4357 0.40 -0.3 22,470 + EX28DRAFT_4357 0.46 +0.3
Or see this region's nucleotide sequence