Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_4351

Experiment: MS_media with m-arsenite 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_4350 and EX28DRAFT_4351 are separated by 11 nucleotidesEX28DRAFT_4351 and EX28DRAFT_4352 are separated by 171 nucleotides EX28DRAFT_4350: EX28DRAFT_4350 - nitrogen regulation protein NR(I), at 11,580 to 12,992 _4350 EX28DRAFT_4351: EX28DRAFT_4351 - Signal transduction histidine kinase, nitrogen specific, at 13,004 to 14,053 _4351 EX28DRAFT_4352: EX28DRAFT_4352 - glutamine synthetase, type I, at 14,225 to 15,634 _4352 Position (kb) 13 14 15Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 12.042 kb on - strand, within EX28DRAFT_4350at 12.956 kb on + strandat 13.040 kb on - strandat 13.273 kb on + strand, within EX28DRAFT_4351at 13.321 kb on + strand, within EX28DRAFT_4351at 13.392 kb on - strand, within EX28DRAFT_4351at 13.554 kb on + strand, within EX28DRAFT_4351at 13.555 kb on - strand, within EX28DRAFT_4351at 13.882 kb on - strand, within EX28DRAFT_4351at 13.919 kb on - strand, within EX28DRAFT_4351at 13.919 kb on - strand, within EX28DRAFT_4351at 14.187 kb on - strandat 14.222 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM
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12,042 - EX28DRAFT_4350 0.33 -2.7
12,956 + -2.3
13,040 - +2.4
13,273 + EX28DRAFT_4351 0.26 +2.9
13,321 + EX28DRAFT_4351 0.30 -5.5
13,392 - EX28DRAFT_4351 0.37 -1.5
13,554 + EX28DRAFT_4351 0.52 -2.6
13,555 - EX28DRAFT_4351 0.52 -1.8
13,882 - EX28DRAFT_4351 0.84 -0.5
13,919 - EX28DRAFT_4351 0.87 -2.4
13,919 - EX28DRAFT_4351 0.87 -0.8
14,187 - +0.7
14,222 + +0.6

Or see this region's nucleotide sequence