Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4306 and EX28DRAFT_4307 are separated by 114 nucleotides EX28DRAFT_4307 and EX28DRAFT_4308 are separated by 71 nucleotides
EX28DRAFT_4306: EX28DRAFT_4306 - Maltose operon periplasmic protein precursor (MalM), at 109,200 to 110,153
_4306
EX28DRAFT_4307: EX28DRAFT_4307 - Maltoporin (phage lambda and maltose receptor), at 110,268 to 111,581
_4307
EX28DRAFT_4308: EX28DRAFT_4308 - ABC-type sugar transport systems, ATPase components, at 111,653 to 112,762
_4308
Position (kb)
110
111
112 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 109.337 kb on - strand, within EX28DRAFT_4306 at 109.337 kb on - strand, within EX28DRAFT_4306 at 109.432 kb on + strand, within EX28DRAFT_4306 at 109.451 kb on + strand, within EX28DRAFT_4306 at 109.456 kb on - strand, within EX28DRAFT_4306 at 109.520 kb on + strand, within EX28DRAFT_4306 at 109.520 kb on + strand, within EX28DRAFT_4306 at 109.632 kb on - strand, within EX28DRAFT_4306 at 109.637 kb on + strand, within EX28DRAFT_4306 at 109.637 kb on + strand, within EX28DRAFT_4306 at 109.651 kb on - strand, within EX28DRAFT_4306 at 109.681 kb on + strand, within EX28DRAFT_4306 at 109.681 kb on + strand, within EX28DRAFT_4306 at 109.682 kb on - strand, within EX28DRAFT_4306 at 109.682 kb on - strand, within EX28DRAFT_4306 at 109.682 kb on - strand, within EX28DRAFT_4306 at 109.766 kb on + strand, within EX28DRAFT_4306 at 109.766 kb on + strand, within EX28DRAFT_4306 at 109.766 kb on + strand, within EX28DRAFT_4306 at 109.766 kb on + strand, within EX28DRAFT_4306 at 109.766 kb on + strand, within EX28DRAFT_4306 at 109.767 kb on - strand, within EX28DRAFT_4306 at 109.767 kb on - strand, within EX28DRAFT_4306 at 109.767 kb on - strand, within EX28DRAFT_4306 at 110.157 kb on + strand at 110.157 kb on + strand at 110.158 kb on - strand at 110.158 kb on - strand at 110.158 kb on - strand at 110.161 kb on - strand at 110.197 kb on + strand at 110.243 kb on - strand at 110.250 kb on + strand at 110.251 kb on - strand at 110.251 kb on - strand at 110.269 kb on + strand at 110.269 kb on + strand at 110.369 kb on - strand at 110.493 kb on - strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.587 kb on + strand, within EX28DRAFT_4307 at 110.588 kb on - strand, within EX28DRAFT_4307 at 110.591 kb on + strand, within EX28DRAFT_4307 at 110.653 kb on + strand, within EX28DRAFT_4307 at 110.654 kb on - strand, within EX28DRAFT_4307 at 110.654 kb on - strand, within EX28DRAFT_4307 at 110.657 kb on + strand, within EX28DRAFT_4307 at 110.657 kb on + strand, within EX28DRAFT_4307 at 110.665 kb on + strand, within EX28DRAFT_4307 at 110.665 kb on + strand, within EX28DRAFT_4307 at 110.665 kb on + strand, within EX28DRAFT_4307 at 110.666 kb on - strand, within EX28DRAFT_4307 at 110.666 kb on - strand, within EX28DRAFT_4307 at 110.780 kb on + strand, within EX28DRAFT_4307 at 110.780 kb on + strand, within EX28DRAFT_4307 at 110.780 kb on + strand, within EX28DRAFT_4307 at 110.781 kb on - strand, within EX28DRAFT_4307 at 110.888 kb on - strand, within EX28DRAFT_4307 at 110.888 kb on - strand, within EX28DRAFT_4307 at 110.890 kb on + strand, within EX28DRAFT_4307 at 110.891 kb on - strand, within EX28DRAFT_4307 at 110.891 kb on - strand, within EX28DRAFT_4307 at 110.891 kb on - strand, within EX28DRAFT_4307 at 111.011 kb on + strand, within EX28DRAFT_4307 at 111.011 kb on + strand, within EX28DRAFT_4307 at 111.012 kb on - strand, within EX28DRAFT_4307 at 111.012 kb on - strand, within EX28DRAFT_4307 at 111.012 kb on - strand, within EX28DRAFT_4307 at 111.149 kb on - strand, within EX28DRAFT_4307 at 111.152 kb on - strand, within EX28DRAFT_4307 at 111.307 kb on + strand, within EX28DRAFT_4307 at 111.329 kb on - strand, within EX28DRAFT_4307 at 111.383 kb on - strand, within EX28DRAFT_4307 at 111.409 kb on + strand, within EX28DRAFT_4307 at 111.410 kb on - strand, within EX28DRAFT_4307 at 111.410 kb on - strand, within EX28DRAFT_4307 at 111.488 kb on - strand at 111.584 kb on + strand at 111.585 kb on - strand at 111.655 kb on - strand at 111.671 kb on - strand at 111.671 kb on - strand at 111.758 kb on + strand at 111.759 kb on - strand at 111.818 kb on - strand, within EX28DRAFT_4308 at 111.945 kb on - strand, within EX28DRAFT_4308 at 112.001 kb on + strand, within EX28DRAFT_4308 at 112.063 kb on + strand, within EX28DRAFT_4308 at 112.063 kb on + strand, within EX28DRAFT_4308 at 112.063 kb on + strand, within EX28DRAFT_4308 at 112.099 kb on - strand, within EX28DRAFT_4308 at 112.198 kb on - strand, within EX28DRAFT_4308 at 112.400 kb on + strand, within EX28DRAFT_4308 at 112.477 kb on + strand, within EX28DRAFT_4308 at 112.477 kb on + strand, within EX28DRAFT_4308 at 112.477 kb on + strand, within EX28DRAFT_4308 at 112.478 kb on - strand, within EX28DRAFT_4308 at 112.478 kb on - strand, within EX28DRAFT_4308 at 112.503 kb on + strand, within EX28DRAFT_4308 at 112.512 kb on + strand, within EX28DRAFT_4308 at 112.512 kb on + strand, within EX28DRAFT_4308 at 112.513 kb on - strand, within EX28DRAFT_4308
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 109,337 - EX28DRAFT_4306 0.14 -0.3 109,337 - EX28DRAFT_4306 0.14 -0.1 109,432 + EX28DRAFT_4306 0.24 +1.4 109,451 + EX28DRAFT_4306 0.26 +0.3 109,456 - EX28DRAFT_4306 0.27 +0.3 109,520 + EX28DRAFT_4306 0.34 +0.4 109,520 + EX28DRAFT_4306 0.34 -0.9 109,632 - EX28DRAFT_4306 0.45 -0.1 109,637 + EX28DRAFT_4306 0.46 -0.3 109,637 + EX28DRAFT_4306 0.46 -0.0 109,651 - EX28DRAFT_4306 0.47 -1.1 109,681 + EX28DRAFT_4306 0.50 -0.3 109,681 + EX28DRAFT_4306 0.50 +0.1 109,682 - EX28DRAFT_4306 0.51 +0.3 109,682 - EX28DRAFT_4306 0.51 +0.5 109,682 - EX28DRAFT_4306 0.51 -0.5 109,766 + EX28DRAFT_4306 0.59 -0.6 109,766 + EX28DRAFT_4306 0.59 +0.0 109,766 + EX28DRAFT_4306 0.59 +0.5 109,766 + EX28DRAFT_4306 0.59 +0.2 109,766 + EX28DRAFT_4306 0.59 -0.7 109,767 - EX28DRAFT_4306 0.59 -0.9 109,767 - EX28DRAFT_4306 0.59 -0.2 109,767 - EX28DRAFT_4306 0.59 +0.6 110,157 + +0.8 110,157 + -0.7 110,158 - -1.0 110,158 - -0.3 110,158 - +0.4 110,161 - +0.3 110,197 + +0.4 110,243 - +1.6 110,250 + -0.1 110,251 - -1.3 110,251 - -0.0 110,269 + -0.1 110,269 + +0.8 110,369 - -0.3 110,493 - EX28DRAFT_4307 0.17 +0.6 110,587 + EX28DRAFT_4307 0.24 -0.1 110,587 + EX28DRAFT_4307 0.24 -0.6 110,587 + EX28DRAFT_4307 0.24 -0.2 110,587 + EX28DRAFT_4307 0.24 -0.0 110,587 + EX28DRAFT_4307 0.24 +1.3 110,587 + EX28DRAFT_4307 0.24 +0.9 110,588 - EX28DRAFT_4307 0.24 +0.1 110,591 + EX28DRAFT_4307 0.25 +0.2 110,653 + EX28DRAFT_4307 0.29 +2.2 110,654 - EX28DRAFT_4307 0.29 +0.8 110,654 - EX28DRAFT_4307 0.29 -0.3 110,657 + EX28DRAFT_4307 0.30 +0.4 110,657 + EX28DRAFT_4307 0.30 +1.0 110,665 + EX28DRAFT_4307 0.30 -0.9 110,665 + EX28DRAFT_4307 0.30 -0.5 110,665 + EX28DRAFT_4307 0.30 +0.3 110,666 - EX28DRAFT_4307 0.30 -2.2 110,666 - EX28DRAFT_4307 0.30 -0.3 110,780 + EX28DRAFT_4307 0.39 +0.2 110,780 + EX28DRAFT_4307 0.39 +0.6 110,780 + EX28DRAFT_4307 0.39 +1.1 110,781 - EX28DRAFT_4307 0.39 +0.8 110,888 - EX28DRAFT_4307 0.47 -2.0 110,888 - EX28DRAFT_4307 0.47 +0.2 110,890 + EX28DRAFT_4307 0.47 +0.7 110,891 - EX28DRAFT_4307 0.47 +0.6 110,891 - EX28DRAFT_4307 0.47 +0.3 110,891 - EX28DRAFT_4307 0.47 +0.3 111,011 + EX28DRAFT_4307 0.57 +1.9 111,011 + EX28DRAFT_4307 0.57 -0.8 111,012 - EX28DRAFT_4307 0.57 +1.1 111,012 - EX28DRAFT_4307 0.57 -2.3 111,012 - EX28DRAFT_4307 0.57 +0.5 111,149 - EX28DRAFT_4307 0.67 +0.1 111,152 - EX28DRAFT_4307 0.67 -0.3 111,307 + EX28DRAFT_4307 0.79 -0.6 111,329 - EX28DRAFT_4307 0.81 -2.0 111,383 - EX28DRAFT_4307 0.85 +0.6 111,409 + EX28DRAFT_4307 0.87 -0.1 111,410 - EX28DRAFT_4307 0.87 -0.2 111,410 - EX28DRAFT_4307 0.87 +0.6 111,488 - +0.2 111,584 + -0.5 111,585 - -1.3 111,655 - -0.1 111,671 - +0.1 111,671 - +1.2 111,758 + +0.1 111,759 - +0.1 111,818 - EX28DRAFT_4308 0.15 +0.4 111,945 - EX28DRAFT_4308 0.26 -0.6 112,001 + EX28DRAFT_4308 0.31 +2.7 112,063 + EX28DRAFT_4308 0.37 +1.1 112,063 + EX28DRAFT_4308 0.37 -0.1 112,063 + EX28DRAFT_4308 0.37 -0.2 112,099 - EX28DRAFT_4308 0.40 -0.3 112,198 - EX28DRAFT_4308 0.49 +0.3 112,400 + EX28DRAFT_4308 0.67 -1.4 112,477 + EX28DRAFT_4308 0.74 +0.6 112,477 + EX28DRAFT_4308 0.74 -0.7 112,477 + EX28DRAFT_4308 0.74 -0.6 112,478 - EX28DRAFT_4308 0.74 -0.5 112,478 - EX28DRAFT_4308 0.74 -0.0 112,503 + EX28DRAFT_4308 0.77 -0.2 112,512 + EX28DRAFT_4308 0.77 +0.3 112,512 + EX28DRAFT_4308 0.77 -0.8 112,513 - EX28DRAFT_4308 0.77 -0.5
Or see this region's nucleotide sequence