Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4285 and EX28DRAFT_4286 are separated by 254 nucleotides EX28DRAFT_4286 and EX28DRAFT_4287 are separated by 1 nucleotides EX28DRAFT_4287 and EX28DRAFT_4288 overlap by 4 nucleotides
EX28DRAFT_4285: EX28DRAFT_4285 - ABC-type sugar transport system, periplasmic component, at 88,814 to 90,130
_4285
EX28DRAFT_4286: EX28DRAFT_4286 - ABC-type branched-chain amino acid transport systems, ATPase component, at 90,385 to 91,098
_4286
EX28DRAFT_4287: EX28DRAFT_4287 - ABC-type branched-chain amino acid transport systems, ATPase component, at 91,100 to 91,867
_4287
EX28DRAFT_4288: EX28DRAFT_4288 - ABC-type branched-chain amino acid transport system, permease component, at 91,864 to 93,141
_4288
Position (kb)
91
92 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 90.144 kb on - strand at 90.144 kb on - strand at 90.174 kb on + strand at 90.175 kb on - strand at 90.234 kb on + strand at 90.235 kb on - strand at 90.382 kb on + strand at 90.382 kb on + strand at 90.398 kb on + strand at 90.561 kb on + strand, within EX28DRAFT_4286 at 90.738 kb on - strand, within EX28DRAFT_4286 at 90.738 kb on - strand, within EX28DRAFT_4286 at 90.739 kb on + strand, within EX28DRAFT_4286 at 90.739 kb on + strand, within EX28DRAFT_4286 at 90.740 kb on - strand, within EX28DRAFT_4286 at 90.901 kb on - strand, within EX28DRAFT_4286 at 91.102 kb on - strand at 91.102 kb on - strand at 91.194 kb on + strand, within EX28DRAFT_4287 at 91.194 kb on + strand, within EX28DRAFT_4287 at 91.194 kb on + strand, within EX28DRAFT_4287 at 91.194 kb on + strand, within EX28DRAFT_4287 at 91.195 kb on - strand, within EX28DRAFT_4287 at 91.199 kb on - strand, within EX28DRAFT_4287 at 91.704 kb on + strand, within EX28DRAFT_4287 at 91.853 kb on + strand at 91.853 kb on + strand at 91.988 kb on + strand at 92.348 kb on + strand, within EX28DRAFT_4288 at 92.349 kb on - strand, within EX28DRAFT_4288 at 92.378 kb on + strand, within EX28DRAFT_4288 at 92.378 kb on + strand, within EX28DRAFT_4288 at 92.378 kb on + strand, within EX28DRAFT_4288 at 92.378 kb on + strand, within EX28DRAFT_4288 at 92.379 kb on - strand, within EX28DRAFT_4288 at 92.663 kb on + strand, within EX28DRAFT_4288 at 92.664 kb on - strand, within EX28DRAFT_4288 at 92.666 kb on + strand, within EX28DRAFT_4288 at 92.688 kb on + strand, within EX28DRAFT_4288 at 92.705 kb on + strand, within EX28DRAFT_4288 at 92.780 kb on + strand, within EX28DRAFT_4288 at 92.780 kb on + strand, within EX28DRAFT_4288
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 90,144 - +0.1 90,144 - +0.3 90,174 + +0.3 90,175 - -0.2 90,234 + -0.0 90,235 - -1.3 90,382 + -3.9 90,382 + +0.3 90,398 + +1.8 90,561 + EX28DRAFT_4286 0.25 +1.9 90,738 - EX28DRAFT_4286 0.49 +1.9 90,738 - EX28DRAFT_4286 0.49 +1.7 90,739 + EX28DRAFT_4286 0.50 +1.3 90,739 + EX28DRAFT_4286 0.50 -2.1 90,740 - EX28DRAFT_4286 0.50 +1.8 90,901 - EX28DRAFT_4286 0.72 +2.4 91,102 - -0.4 91,102 - -0.1 91,194 + EX28DRAFT_4287 0.12 +2.2 91,194 + EX28DRAFT_4287 0.12 +1.8 91,194 + EX28DRAFT_4287 0.12 +1.7 91,194 + EX28DRAFT_4287 0.12 +1.6 91,195 - EX28DRAFT_4287 0.12 +1.8 91,199 - EX28DRAFT_4287 0.13 +1.7 91,704 + EX28DRAFT_4287 0.79 +1.5 91,853 + -1.3 91,853 + +0.4 91,988 + +2.5 92,348 + EX28DRAFT_4288 0.38 +2.8 92,349 - EX28DRAFT_4288 0.38 +1.8 92,378 + EX28DRAFT_4288 0.40 +1.7 92,378 + EX28DRAFT_4288 0.40 +1.1 92,378 + EX28DRAFT_4288 0.40 +1.3 92,378 + EX28DRAFT_4288 0.40 +1.5 92,379 - EX28DRAFT_4288 0.40 +1.6 92,663 + EX28DRAFT_4288 0.63 +1.2 92,664 - EX28DRAFT_4288 0.63 +1.7 92,666 + EX28DRAFT_4288 0.63 +1.4 92,688 + EX28DRAFT_4288 0.64 +1.9 92,705 + EX28DRAFT_4288 0.66 +0.4 92,780 + EX28DRAFT_4288 0.72 +1.5 92,780 + EX28DRAFT_4288 0.72 +1.5
Or see this region's nucleotide sequence