Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4266 and EX28DRAFT_4267 are separated by 69 nucleotides EX28DRAFT_4267 and EX28DRAFT_4268 are separated by 117 nucleotides EX28DRAFT_4268 and EX28DRAFT_4269 are separated by 63 nucleotides EX28DRAFT_4269 and EX28DRAFT_4270 are separated by 108 nucleotides
EX28DRAFT_4266: EX28DRAFT_4266 - Fe2+/Zn2+ uptake regulation proteins, at 71,035 to 71,547
_4266
EX28DRAFT_4267: EX28DRAFT_4267 - Uncharacterized protein conserved in bacteria, at 71,617 to 71,829
_4267
EX28DRAFT_4268: EX28DRAFT_4268 - putative efflux protein, MATE family, at 71,947 to 73,284
_4268
EX28DRAFT_4269: EX28DRAFT_4269 - SOS regulatory protein LexA, at 73,348 to 73,956
_4269
EX28DRAFT_4270: EX28DRAFT_4270 - Diacylglycerol kinase, at 74,065 to 74,433
_4270
Position (kb) 71
72
73
74 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 70.953 kb on - strand at 70.953 kb on - strand at 70.995 kb on - strand at 71.015 kb on + strand at 71.015 kb on + strand at 71.040 kb on + strand at 71.389 kb on - strand, within EX28DRAFT_4266 at 71.391 kb on + strand, within EX28DRAFT_4266 at 71.392 kb on - strand, within EX28DRAFT_4266 at 71.587 kb on + strand at 71.587 kb on + strand at 71.588 kb on - strand at 71.598 kb on - strand at 71.627 kb on + strand at 71.654 kb on - strand, within EX28DRAFT_4267 at 71.742 kb on + strand, within EX28DRAFT_4267 at 71.821 kb on - strand at 72.132 kb on + strand, within EX28DRAFT_4268 at 72.183 kb on - strand, within EX28DRAFT_4268 at 72.265 kb on - strand, within EX28DRAFT_4268 at 72.265 kb on - strand, within EX28DRAFT_4268 at 72.389 kb on + strand, within EX28DRAFT_4268 at 72.412 kb on + strand, within EX28DRAFT_4268 at 72.420 kb on - strand, within EX28DRAFT_4268 at 72.675 kb on + strand, within EX28DRAFT_4268 at 72.678 kb on + strand, within EX28DRAFT_4268 at 72.679 kb on - strand, within EX28DRAFT_4268 at 72.679 kb on - strand, within EX28DRAFT_4268 at 72.679 kb on - strand, within EX28DRAFT_4268 at 72.769 kb on - strand, within EX28DRAFT_4268 at 72.816 kb on - strand, within EX28DRAFT_4268 at 72.963 kb on + strand, within EX28DRAFT_4268 at 73.055 kb on + strand, within EX28DRAFT_4268 at 73.055 kb on + strand, within EX28DRAFT_4268 at 73.055 kb on + strand, within EX28DRAFT_4268 at 73.056 kb on - strand, within EX28DRAFT_4268 at 73.155 kb on - strand at 73.511 kb on - strand, within EX28DRAFT_4269 at 74.048 kb on + strand at 74.048 kb on + strand at 74.048 kb on + strand at 74.048 kb on + strand at 74.053 kb on - strand at 74.230 kb on + strand, within EX28DRAFT_4270
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 70,953 - +0.5 70,953 - -1.2 70,995 - -1.4 71,015 + -0.0 71,015 + +0.1 71,040 + -0.6 71,389 - EX28DRAFT_4266 0.69 -0.3 71,391 + EX28DRAFT_4266 0.69 -2.2 71,392 - EX28DRAFT_4266 0.70 -0.2 71,587 + -0.2 71,587 + +0.4 71,588 - -0.4 71,598 - -0.8 71,627 + +0.4 71,654 - EX28DRAFT_4267 0.17 +0.3 71,742 + EX28DRAFT_4267 0.59 +0.6 71,821 - -0.8 72,132 + EX28DRAFT_4268 0.14 -1.0 72,183 - EX28DRAFT_4268 0.18 +1.6 72,265 - EX28DRAFT_4268 0.24 +0.2 72,265 - EX28DRAFT_4268 0.24 +0.3 72,389 + EX28DRAFT_4268 0.33 +0.3 72,412 + EX28DRAFT_4268 0.35 -0.0 72,420 - EX28DRAFT_4268 0.35 +0.5 72,675 + EX28DRAFT_4268 0.54 +0.3 72,678 + EX28DRAFT_4268 0.55 +0.4 72,679 - EX28DRAFT_4268 0.55 -0.1 72,679 - EX28DRAFT_4268 0.55 +0.3 72,679 - EX28DRAFT_4268 0.55 +0.9 72,769 - EX28DRAFT_4268 0.61 -2.9 72,816 - EX28DRAFT_4268 0.65 -0.2 72,963 + EX28DRAFT_4268 0.76 -0.4 73,055 + EX28DRAFT_4268 0.83 -0.2 73,055 + EX28DRAFT_4268 0.83 -0.7 73,055 + EX28DRAFT_4268 0.83 +0.4 73,056 - EX28DRAFT_4268 0.83 +0.1 73,155 - +0.4 73,511 - EX28DRAFT_4269 0.27 +1.6 74,048 + +0.4 74,048 + +0.1 74,048 + -0.1 74,048 + +0.7 74,053 - -0.9 74,230 + EX28DRAFT_4270 0.45 -1.4
Or see this region's nucleotide sequence